RNA–Protein interactions for RNA: ENSMUST00000101395.2

Hoxa4-201, Transcript of Homeobox protein Hox-A4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxa4, Length 1,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4-201ENSMUST00000101395 Sprr2gO70558 76 aa9.41□□□□□ -0.9
Hoxa4-201ENSMUST00000101395 Gm20538F6Z9R1 75 aa9.41□□□□□ -0.9
Hoxa4-201ENSMUST00000101395 A0A1Y7VJH8 109 aa9.37□□□□□ -0.91
Hoxa4-201ENSMUST00000101395 Sprr2iO70560 76 aa9.33□□□□□ -0.92
Hoxa4-201ENSMUST00000101395 Lce1kJ3QP15 125 aa9.24□□□□□ -0.93
Hoxa4-201ENSMUST00000101395 Sprr2dO70555 85 aa9.21□□□□□ -0.93
Hoxa4-201ENSMUST00000101395 Krtap5-2Q9D5Z7 189 aa9.2□□□□□ -0.94
Hoxa4-201ENSMUST00000101395 Krtap20-2E9Q0A8 60 aa9.17□□□□□ -0.94
Hoxa4-201ENSMUST00000101395 Lce1a1Q9CQH5 143 aa9.06□□□□□ -0.96
Hoxa4-201ENSMUST00000101395 Krtap19-4Q925H7 84 aa9□□□□□ -0.97
Hoxa4-201ENSMUST00000101395 Lce1fB9EJP6 147 aa8.97□□□□□ -0.97
Hoxa4-201ENSMUST00000101395 Lce1cQ9D1C5 147 aa8.97□□□□□ -0.97
Hoxa4-201ENSMUST00000101395 Gm11568A2A4M2 211 aa8.96□□□□□ -0.97
Hoxa4-201ENSMUST00000101395 Krtap9-1Q64526 186 aa8.96□□□□□ -0.97
Hoxa4-201ENSMUST00000101395 Lce3cQ91V05 98 aa8.9□□□□□ -0.98
Hoxa4-201ENSMUST00000101395 Ndufaf8A2AMZ4 74 aa8.9□□□□□ -0.99
Hoxa4-201ENSMUST00000101395 Mt1P02802 61 aaKnown RBP8.86□□□□□ -0.99
Hoxa4-201ENSMUST00000101395 Lce1eQ9D139 143 aa8.83□□□□□ -1
Hoxa4-201ENSMUST00000101395 Lce3dE9Q8V1 98 aa8.79□□□□□ -1
Hoxa4-201ENSMUST00000101395 4933428G20RikQ9D3X4 101 aa8.69□□□□□ -1.02
Hoxa4-201ENSMUST00000101395 Lce3eF8VQJ0 98 aa8.69□□□□□ -1.02
Hoxa4-201ENSMUST00000101395 Lce3fQ6PAI4 98 aa8.69□□□□□ -1.02
Hoxa4-201ENSMUST00000101395 Gm11559Q9D3H7 191 aa8.65□□□□□ -1.03
Hoxa4-201ENSMUST00000101395 Gm4553A0A1B0GSA9 284 aa8.64□□□□□ -1.03
Hoxa4-201ENSMUST00000101395 ObscnA2AAJ9 8891 aaKnown RBP8.51□□□□□ -1.05
Hoxa4-201ENSMUST00000101395 Gm10153A0A1B0GRL1 320 aa8.49□□□□□ -1.05
Hoxa4-201ENSMUST00000101395 Gm45337A0A1B0GS71 263 aa8.44□□□□□ -1.06
Hoxa4-201ENSMUST00000101395 Gm10100J3QK64 120 aa8.39□□□□□ -1.07
Hoxa4-201ENSMUST00000101395 Lce3aQ497I5 98 aa8.32□□□□□ -1.08
Hoxa4-201ENSMUST00000101395 Gm2431E9Q8S1 172 aa8.28□□□□□ -1.08
Hoxa4-201ENSMUST00000101395 Gm11554B1AQB2 190 aa8.25□□□□□ -1.09
Hoxa4-201ENSMUST00000101395 A030005L19RikA0A1Y7VIU2 113 aa8.24□□□□□ -1.09
Hoxa4-201ENSMUST00000101395 Macf1Q9QXZ0 7354 aaKnown RBP8.22□□□□□ -1.09
Hoxa4-201ENSMUST00000101395 Gm40460A0A1B0GR10 244 aa8.18□□□□□ -1.1
Hoxa4-201ENSMUST00000101395 Gm7579A0A1B0GRJ4 243 aa8.18□□□□□ -1.1
Hoxa4-201ENSMUST00000101395 Krtap5-5Q2TA51 241 aa8.18□□□□□ -1.1
Hoxa4-201ENSMUST00000101395 Krtap5-4Q62220 223 aa8.18□□□□□ -1.1
Hoxa4-201ENSMUST00000101395 Gm10142J3KMP7 120 aa8.16□□□□□ -1.1
Hoxa4-201ENSMUST00000101395 Kmt2dQ6PDK2 5588 aa8.11□□□□□ -1.11
Hoxa4-201ENSMUST00000101395 Mt3P28184 68 aa8.09□□□□□ -1.11
Hoxa4-201ENSMUST00000101395 Hmcn1D3YXG0 5634 aa7.96□□□□□ -1.14
Hoxa4-201ENSMUST00000101395 Sprr2hO70559 108 aa7.94□□□□□ -1.14
Hoxa4-201ENSMUST00000101395 Eppk1Q8R0W0 6548 aa7.81□□□□□ -1.16
Hoxa4-201ENSMUST00000101395 Gm39115A0A1B0GSH7 232 aa7.8□□□□□ -1.16
Hoxa4-201ENSMUST00000101395 A0A1Y7VLE6 161 aa7.75□□□□□ -1.17
Hoxa4-201ENSMUST00000101395 Sprr2eO70556 76 aa7.4□□□□□ -1.22
Hoxa4-201ENSMUST00000101395 Gm9112A2AI92 75 aa7.38□□□□□ -1.23
Hoxa4-201ENSMUST00000101395 Muc19Q6PZE0 7524 aa7.29□□□□□ -1.24
Hoxa4-201ENSMUST00000101395 Gm11639A0A1D5RLM8 5808 aa7.27□□□□□ -1.25
Hoxa4-201ENSMUST00000101395 DstQ91ZU6 7393 aaKnown RBP7.25□□□□□ -1.25
Hoxa4-201ENSMUST00000101395 Gm10024A0A0A0MQA4 119 aa7.1□□□□□ -1.27
Hoxa4-201ENSMUST00000101395 Sprr2fO70557 76 aa7.1□□□□□ -1.27
Hoxa4-201ENSMUST00000101395 Krtap28-10A0A1Y7VP58 119 aa7.08□□□□□ -1.28
Hoxa4-201ENSMUST00000101395 Gm45618A0A1B0GSA0 219 aa7.02□□□□□ -1.29
Hoxa4-201ENSMUST00000101395 Krtap28-13A0A087WQP5 138 aa6.92□□□□□ -1.3
Hoxa4-201ENSMUST00000101395 AhnakE9Q616 5656 aaKnown RBP6.89□□□□□ -1.31
Hoxa4-201ENSMUST00000101395 Krtap4-16Q91W93 202 aa6.86□□□□□ -1.31
Hoxa4-201ENSMUST00000101395 Krtap31-1Q9D644 177 aa6.79□□□□□ -1.32
Hoxa4-201ENSMUST00000101395 A030005K14RikA0A1Y7VNY1 122 aa6.77□□□□□ -1.33
Hoxa4-201ENSMUST00000101395 Gpr98Q8VHN7 6298 aaKnown RBP6.77□□□□□ -1.33
Hoxa4-201ENSMUST00000101395 NebE9Q1W3 7152 aa6.68□□□□□ -1.34
Hoxa4-201ENSMUST00000101395 1110025L11RikO09048 78 aa6.61□□□□□ -1.35
Hoxa4-201ENSMUST00000101395 Krtap6-5Q925H3 78 aa6.61□□□□□ -1.35
Hoxa4-201ENSMUST00000101395 A0A1Y7VJ07 166 aa6.35□□□□□ -1.39
Hoxa4-201ENSMUST00000101395 Krtap31-2Q8CAY5 177 aa6.33□□□□□ -1.4
Hoxa4-201ENSMUST00000101395 Gm7544A0A1Y7VJ58 118 aa6.2□□□□□ -1.42
Hoxa4-201ENSMUST00000101395 Muc16A0A140LJ72 8478 aa6.14□□□□□ -1.43
Hoxa4-201ENSMUST00000101395 Gm29735A0A1B0GT06 219 aa6.13□□□□□ -1.43
Hoxa4-201ENSMUST00000101395 A030014E15RikA0A1Y7VJV2 120 aa5.96□□□□□ -1.46
Hoxa4-201ENSMUST00000101395 Gm10229O08631 77 aa5.88□□□□□ -1.47
Hoxa4-201ENSMUST00000101395 Gm11567Q9D141 195 aa5.84□□□□□ -1.48
Hoxa4-201ENSMUST00000101395 Sprr2bO70554 98 aa5.7□□□□□ -1.5
Hoxa4-201ENSMUST00000101395 A030003K21RikA0A1Y7VIM3 128 aa5.5□□□□□ -1.53
Hoxa4-201ENSMUST00000101395 Krtap21-1Q925H4 128 aa5.38□□□□□ -1.55
Hoxa4-201ENSMUST00000101395 Gm6217A0A1Y7VJK9 128 aa5.24□□□□□ -1.57
Hoxa4-201ENSMUST00000101395 Krtap6-2O08884 159 aa5.09□□□□□ -1.59
Hoxa4-201ENSMUST00000101395 A0A286YCP9 139 aa4.81□□□□□ -1.64
Hoxa4-201ENSMUST00000101395 Phgr1Q8K0G7 91 aa4.74□□□□□ -1.65
Hoxa4-201ENSMUST00000101395 Krtap5-1Q64507 230 aa4.12□□□□□ -1.75
Hoxa4-201ENSMUST00000101395 Gm4559A4IF42 199 aa3.51□□□□□ -1.85
Retrieved 80 of 22,080 RNA–protein pairs in 9.1 ms