RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Gm10272F7CZ33 110 aa4.56□□□□□ -1.68
H2afv-201ENSMUST00000093346 Lce3bQ9CQM7 98 aa4.54□□□□□ -1.68
H2afv-201ENSMUST00000093346 Syne1Q6ZWR6 8799 aa4.53□□□□□ -1.68
H2afv-201ENSMUST00000093346 Lce1kJ3QP15 125 aa4.53□□□□□ -1.68
H2afv-201ENSMUST00000093346 Tnp1P10856 55 aa4.49□□□□□ -1.69
H2afv-201ENSMUST00000093346 Eppk1Q8R0W0 6548 aa4.43□□□□□ -1.7
H2afv-201ENSMUST00000093346 Gm11559Q9D3H7 191 aa4.43□□□□□ -1.7
H2afv-201ENSMUST00000093346 Gm40193A0A1B0GT39 78 aa4.41□□□□□ -1.7
H2afv-201ENSMUST00000093346 Gm11568A2A4M2 211 aa4.4□□□□□ -1.71
H2afv-201ENSMUST00000093346 Krtap9-1Q64526 186 aa4.4□□□□□ -1.71
H2afv-201ENSMUST00000093346 Gm4553A0A1B0GSA9 284 aa4.35□□□□□ -1.71
H2afv-201ENSMUST00000093346 Macf1Q9QXZ0 7354 aaKnown RBP4.34□□□□□ -1.71
H2afv-201ENSMUST00000093346 A030005L19RikA0A1Y7VIU2 113 aa4.33□□□□□ -1.72
H2afv-201ENSMUST00000093346 Kmt2dQ6PDK2 5588 aa4.32□□□□□ -1.72
H2afv-201ENSMUST00000093346 Lce1fB9EJP6 147 aa4.31□□□□□ -1.72
H2afv-201ENSMUST00000093346 Lce1cQ9D1C5 147 aa4.31□□□□□ -1.72
H2afv-201ENSMUST00000093346 Gm11554B1AQB2 190 aa4.3□□□□□ -1.72
H2afv-201ENSMUST00000093346 Gm11938Q9D3H4 131 aa4.25□□□□□ -1.73
H2afv-201ENSMUST00000093346 Gm11639A0A1D5RLM8 5808 aa4.23□□□□□ -1.73
H2afv-201ENSMUST00000093346 Gm45337A0A1B0GS71 263 aa4.19□□□□□ -1.74
H2afv-201ENSMUST00000093346 Gm2431E9Q8S1 172 aa4.19□□□□□ -1.74
H2afv-201ENSMUST00000093346 Mt1P02802 61 aaKnown RBP4.17□□□□□ -1.74
H2afv-201ENSMUST00000093346 Gm10153A0A1B0GRL1 320 aa4.11□□□□□ -1.75
H2afv-201ENSMUST00000093346 Krtap19-4Q925H7 84 aa4.11□□□□□ -1.75
H2afv-201ENSMUST00000093346 Lce3cQ91V05 98 aa4.1□□□□□ -1.75
H2afv-201ENSMUST00000093346 Gpr98Q8VHN7 6298 aaKnown RBP4.09□□□□□ -1.75
H2afv-201ENSMUST00000093346 Hmcn1D3YXG0 5634 aa4.09□□□□□ -1.75
H2afv-201ENSMUST00000093346 Gm40460A0A1B0GR10 244 aa4.04□□□□□ -1.76
H2afv-201ENSMUST00000093346 Gm7579A0A1B0GRJ4 243 aa4.04□□□□□ -1.76
H2afv-201ENSMUST00000093346 Lce3dE9Q8V1 98 aa4.04□□□□□ -1.76
H2afv-201ENSMUST00000093346 Krtap5-5Q2TA51 241 aa4.04□□□□□ -1.76
H2afv-201ENSMUST00000093346 Krtap5-4Q62220 223 aa4.04□□□□□ -1.76
H2afv-201ENSMUST00000093346 Muc19Q6PZE0 7524 aa4.02□□□□□ -1.77
H2afv-201ENSMUST00000093346 Mp68P56379 58 aa3.98□□□□□ -1.77
H2afv-201ENSMUST00000093346 Gm39115A0A1B0GSH7 232 aa3.95□□□□□ -1.78
H2afv-201ENSMUST00000093346 Lce3eF8VQJ0 98 aa3.94□□□□□ -1.78
H2afv-201ENSMUST00000093346 Lce3fQ6PAI4 98 aa3.94□□□□□ -1.78
H2afv-201ENSMUST00000093346 Gm20538F6Z9R1 75 aa3.92□□□□□ -1.78
H2afv-201ENSMUST00000093346 ObscnA2AAJ9 8891 aaKnown RBP3.91□□□□□ -1.78
H2afv-201ENSMUST00000093346 DstQ91ZU6 7393 aaKnown RBP3.89□□□□□ -1.79
H2afv-201ENSMUST00000093346 Sprr2dO70555 85 aa3.86□□□□□ -1.79
H2afv-201ENSMUST00000093346 Mt3P28184 68 aa3.86□□□□□ -1.79
H2afv-201ENSMUST00000093346 4933428G20RikQ9D3X4 101 aa3.85□□□□□ -1.79
H2afv-201ENSMUST00000093346 A0A1Y7VLE6 161 aa3.82□□□□□ -1.8
H2afv-201ENSMUST00000093346 Krtap28-10A0A1Y7VP58 119 aa3.8□□□□□ -1.8
H2afv-201ENSMUST00000093346 Krtap28-13A0A087WQP5 138 aa3.79□□□□□ -1.8
H2afv-201ENSMUST00000093346 Lce3aQ497I5 98 aa3.77□□□□□ -1.81
H2afv-201ENSMUST00000093346 A030005K14RikA0A1Y7VNY1 122 aa3.74□□□□□ -1.81
H2afv-201ENSMUST00000093346 NebE9Q1W3 7152 aa3.71□□□□□ -1.82
H2afv-201ENSMUST00000093346 AhnakE9Q616 5656 aaKnown RBP3.7□□□□□ -1.82
H2afv-201ENSMUST00000093346 Sprr2fO70557 76 aa3.69□□□□□ -1.82
H2afv-201ENSMUST00000093346 Gm10100J3QK64 120 aa3.66□□□□□ -1.82
H2afv-201ENSMUST00000093346 Krtap4-16Q91W93 202 aa3.66□□□□□ -1.82
H2afv-201ENSMUST00000093346 Gm45618A0A1B0GSA0 219 aa3.64□□□□□ -1.83
H2afv-201ENSMUST00000093346 Gm10142J3KMP7 120 aa3.44□□□□□ -1.86
H2afv-201ENSMUST00000093346 A0A1Y7VJ07 166 aa3.43□□□□□ -1.86
H2afv-201ENSMUST00000093346 Ndufaf8A2AMZ4 74 aa3.42□□□□□ -1.86
H2afv-201ENSMUST00000093346 Sprr2eO70556 76 aa3.42□□□□□ -1.86
H2afv-201ENSMUST00000093346 Gm7544A0A1Y7VJ58 118 aa3.38□□□□□ -1.87
H2afv-201ENSMUST00000093346 A030014E15RikA0A1Y7VJV2 120 aa3.37□□□□□ -1.87
H2afv-201ENSMUST00000093346 Gm10024A0A0A0MQA4 119 aa3.34□□□□□ -1.87
H2afv-201ENSMUST00000093346 Sprr2hO70559 108 aa3.32□□□□□ -1.88
H2afv-201ENSMUST00000093346 Gm9112A2AI92 75 aa3.29□□□□□ -1.88
H2afv-201ENSMUST00000093346 1110025L11RikO09048 78 aa3.03□□□□□ -1.92
H2afv-201ENSMUST00000093346 Krtap6-5Q925H3 78 aa3.03□□□□□ -1.92
H2afv-201ENSMUST00000093346 Muc16A0A140LJ72 8478 aa3.01□□□□□ -1.93
H2afv-201ENSMUST00000093346 Gm29735A0A1B0GT06 219 aa2.99□□□□□ -1.93
H2afv-201ENSMUST00000093346 A030003K21RikA0A1Y7VIM3 128 aa2.82□□□□□ -1.96
H2afv-201ENSMUST00000093346 Gm11567Q9D141 195 aa2.82□□□□□ -1.96
H2afv-201ENSMUST00000093346 Gm10229O08631 77 aa2.72□□□□□ -1.97
H2afv-201ENSMUST00000093346 Krtap31-1Q9D644 177 aa2.71□□□□□ -1.98
H2afv-201ENSMUST00000093346 Gm6217A0A1Y7VJK9 128 aa2.7□□□□□ -1.98
H2afv-201ENSMUST00000093346 A0A286YCP9 139 aa2.69□□□□□ -1.98
H2afv-201ENSMUST00000093346 Krtap31-2Q8CAY5 177 aa2.65□□□□□ -1.99
H2afv-201ENSMUST00000093346 Krtap21-1Q925H4 128 aa2.44□□□□□ -2.02
H2afv-201ENSMUST00000093346 Sprr2bO70554 98 aa2.42□□□□□ -2.02
H2afv-201ENSMUST00000093346 Krtap6-2O08884 159 aa2.4□□□□□ -2.03
H2afv-201ENSMUST00000093346 Krtap5-1Q64507 230 aa2.21□□□□□ -2.06
H2afv-201ENSMUST00000093346 Phgr1Q8K0G7 91 aa2.01□□□□□ -2.09
H2afv-201ENSMUST00000093346 Gm4559A4IF42 199 aa1.72□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 72.5 ms