RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gm10272F7CZ33 110 aa8.54□□□□□ -1.04
Cpsf4-201ENSMUST00000070487 Lce1kJ3QP15 125 aa8.54□□□□□ -1.04
Cpsf4-201ENSMUST00000070487 Syne1Q6ZWR6 8799 aa8.5□□□□□ -1.05
Cpsf4-201ENSMUST00000070487 Lce3bQ9CQM7 98 aa8.5□□□□□ -1.05
Cpsf4-201ENSMUST00000070487 Tnp1P10856 55 aa8.38□□□□□ -1.07
Cpsf4-201ENSMUST00000070487 Gm11559Q9D3H7 191 aa8.32□□□□□ -1.08
Cpsf4-201ENSMUST00000070487 Gm11568A2A4M2 211 aa8.27□□□□□ -1.09
Cpsf4-201ENSMUST00000070487 Krtap9-1Q64526 186 aa8.27□□□□□ -1.09
Cpsf4-201ENSMUST00000070487 Gm40193A0A1B0GT39 78 aa8.24□□□□□ -1.09
Cpsf4-201ENSMUST00000070487 Gm4553A0A1B0GSA9 284 aa8.17□□□□□ -1.1
Cpsf4-201ENSMUST00000070487 A030005L19RikA0A1Y7VIU2 113 aa8.14□□□□□ -1.11
Cpsf4-201ENSMUST00000070487 Lce1fB9EJP6 147 aa8.08□□□□□ -1.12
Cpsf4-201ENSMUST00000070487 Lce1cQ9D1C5 147 aa8.08□□□□□ -1.12
Cpsf4-201ENSMUST00000070487 Gm11554B1AQB2 190 aa8.07□□□□□ -1.12
Cpsf4-201ENSMUST00000070487 Mp68P56379 58 aa8□□□□□ -1.13
Cpsf4-201ENSMUST00000070487 Gm11938Q9D3H4 131 aa7.98□□□□□ -1.13
Cpsf4-201ENSMUST00000070487 Eppk1Q8R0W0 6548 aa7.97□□□□□ -1.13
Cpsf4-201ENSMUST00000070487 Macf1Q9QXZ0 7354 aaKnown RBP7.97□□□□□ -1.13
Cpsf4-201ENSMUST00000070487 Gm2431E9Q8S1 172 aa7.88□□□□□ -1.15
Cpsf4-201ENSMUST00000070487 Gm45337A0A1B0GS71 263 aa7.87□□□□□ -1.15
Cpsf4-201ENSMUST00000070487 Kmt2dQ6PDK2 5588 aa7.85□□□□□ -1.15
Cpsf4-201ENSMUST00000070487 Mt1P02802 61 aaKnown RBP7.83□□□□□ -1.16
Cpsf4-201ENSMUST00000070487 Gm10153A0A1B0GRL1 320 aa7.75□□□□□ -1.17
Cpsf4-201ENSMUST00000070487 Krtap19-4Q925H7 84 aa7.69□□□□□ -1.18
Cpsf4-201ENSMUST00000070487 Lce3cQ91V05 98 aa7.67□□□□□ -1.18
Cpsf4-201ENSMUST00000070487 Gm40460A0A1B0GR10 244 aa7.6□□□□□ -1.19
Cpsf4-201ENSMUST00000070487 Gm7579A0A1B0GRJ4 243 aa7.6□□□□□ -1.19
Cpsf4-201ENSMUST00000070487 Krtap5-5Q2TA51 241 aa7.6□□□□□ -1.19
Cpsf4-201ENSMUST00000070487 Krtap5-4Q62220 223 aa7.6□□□□□ -1.19
Cpsf4-201ENSMUST00000070487 Lce3dE9Q8V1 98 aa7.56□□□□□ -1.2
Cpsf4-201ENSMUST00000070487 Gm11639A0A1D5RLM8 5808 aa7.48□□□□□ -1.21
Cpsf4-201ENSMUST00000070487 Gm20538F6Z9R1 75 aa7.47□□□□□ -1.21
Cpsf4-201ENSMUST00000070487 Hmcn1D3YXG0 5634 aa7.46□□□□□ -1.22
Cpsf4-201ENSMUST00000070487 Gm39115A0A1B0GSH7 232 aa7.41□□□□□ -1.22
Cpsf4-201ENSMUST00000070487 Lce3eF8VQJ0 98 aa7.37□□□□□ -1.23
Cpsf4-201ENSMUST00000070487 Lce3fQ6PAI4 98 aa7.37□□□□□ -1.23
Cpsf4-201ENSMUST00000070487 Muc19Q6PZE0 7524 aa7.36□□□□□ -1.23
Cpsf4-201ENSMUST00000070487 ObscnA2AAJ9 8891 aaKnown RBP7.31□□□□□ -1.24
Cpsf4-201ENSMUST00000070487 Sprr2dO70555 85 aa7.26□□□□□ -1.25
Cpsf4-201ENSMUST00000070487 Mt3P28184 68 aa7.23□□□□□ -1.25
Cpsf4-201ENSMUST00000070487 4933428G20RikQ9D3X4 101 aa7.16□□□□□ -1.26
Cpsf4-201ENSMUST00000070487 DstQ91ZU6 7393 aaKnown RBP7.12□□□□□ -1.27
Cpsf4-201ENSMUST00000070487 Gpr98Q8VHN7 6298 aaKnown RBP7.11□□□□□ -1.27
Cpsf4-201ENSMUST00000070487 Ndufaf8A2AMZ4 74 aa7.11□□□□□ -1.27
Cpsf4-201ENSMUST00000070487 Lce3aQ497I5 98 aa7.05□□□□□ -1.28
Cpsf4-201ENSMUST00000070487 Gm10100J3QK64 120 aa6.87□□□□□ -1.31
Cpsf4-201ENSMUST00000070487 Sprr2fO70557 76 aa6.87□□□□□ -1.31
Cpsf4-201ENSMUST00000070487 A0A1Y7VLE6 161 aa6.86□□□□□ -1.31
Cpsf4-201ENSMUST00000070487 Krtap4-16Q91W93 202 aa6.86□□□□□ -1.31
Cpsf4-201ENSMUST00000070487 Gm45618A0A1B0GSA0 219 aa6.85□□□□□ -1.31
Cpsf4-201ENSMUST00000070487 NebE9Q1W3 7152 aa6.77□□□□□ -1.33
Cpsf4-201ENSMUST00000070487 AhnakE9Q616 5656 aaKnown RBP6.59□□□□□ -1.35
Cpsf4-201ENSMUST00000070487 Gm10142J3KMP7 120 aa6.43□□□□□ -1.38
Cpsf4-201ENSMUST00000070487 Sprr2eO70556 76 aa6.38□□□□□ -1.39
Cpsf4-201ENSMUST00000070487 Sprr2hO70559 108 aa6.25□□□□□ -1.41
Cpsf4-201ENSMUST00000070487 Gm10024A0A0A0MQA4 119 aa6.23□□□□□ -1.41
Cpsf4-201ENSMUST00000070487 Gm9112A2AI92 75 aa6.21□□□□□ -1.42
Cpsf4-201ENSMUST00000070487 Krtap31-2Q8CAY5 177 aa5.84□□□□□ -1.47
Cpsf4-201ENSMUST00000070487 A0A1Y7VJ07 166 aa5.74□□□□□ -1.49
Cpsf4-201ENSMUST00000070487 1110025L11RikO09048 78 aa5.68□□□□□ -1.5
Cpsf4-201ENSMUST00000070487 Krtap6-5Q925H3 78 aa5.68□□□□□ -1.5
Cpsf4-201ENSMUST00000070487 Gm29735A0A1B0GT06 219 aa5.63□□□□□ -1.51
Cpsf4-201ENSMUST00000070487 Muc16A0A140LJ72 8478 aa5.59□□□□□ -1.51
Cpsf4-201ENSMUST00000070487 Krtap31-1Q9D644 177 aa5.43□□□□□ -1.54
Cpsf4-201ENSMUST00000070487 Gm11567Q9D141 195 aa5.3□□□□□ -1.56
Cpsf4-201ENSMUST00000070487 A030005K14RikA0A1Y7VNY1 122 aa5.11□□□□□ -1.59
Cpsf4-201ENSMUST00000070487 Krtap28-13A0A087WQP5 138 aa5.1□□□□□ -1.59
Cpsf4-201ENSMUST00000070487 Gm10229O08631 77 aa5.09□□□□□ -1.59
Cpsf4-201ENSMUST00000070487 Krtap28-10A0A1Y7VP58 119 aa4.9□□□□□ -1.63
Cpsf4-201ENSMUST00000070487 A030014E15RikA0A1Y7VJV2 120 aa4.79□□□□□ -1.64
Cpsf4-201ENSMUST00000070487 Krtap21-1Q925H4 128 aa4.59□□□□□ -1.67
Cpsf4-201ENSMUST00000070487 Krtap6-2O08884 159 aa4.51□□□□□ -1.69
Cpsf4-201ENSMUST00000070487 Gm7544A0A1Y7VJ58 118 aa4.5□□□□□ -1.69
Cpsf4-201ENSMUST00000070487 Sprr2bO70554 98 aa4.49□□□□□ -1.69
Cpsf4-201ENSMUST00000070487 A030003K21RikA0A1Y7VIM3 128 aa4.29□□□□□ -1.72
Cpsf4-201ENSMUST00000070487 Krtap5-1Q64507 230 aa4.15□□□□□ -1.74
Cpsf4-201ENSMUST00000070487 A0A286YCP9 139 aa3.95□□□□□ -1.78
Cpsf4-201ENSMUST00000070487 Phgr1Q8K0G7 91 aa3.77□□□□□ -1.81
Cpsf4-201ENSMUST00000070487 Gm6217A0A1Y7VJK9 128 aa3.35□□□□□ -1.87
Cpsf4-201ENSMUST00000070487 Gm4559A4IF42 199 aa3.24□□□□□ -1.89
Retrieved 80 of 22,080 RNA–protein pairs in 11.3 ms