RNA–Protein interactions for RNA: ENSMUST00000068452.9

Cnot1-201, Transcript of CCR4-NOT transcription complex subunit 1, mousemouse

TSL 1 (best) BASIC

Gene Cnot1, Length 8,152 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot1-201ENSMUST00000068452 Krtap4-8B1AQA8 209 aa1.73□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Krtap6-3A0A087WQL6 57 aa1.72□□□□□ -2.13
Cnot1-201ENSMUST00000068452 Sprr2eO70556 76 aa1.71□□□□□ -2.14
Cnot1-201ENSMUST00000068452 Mt4P47945 62 aa1.71□□□□□ -2.14
Cnot1-201ENSMUST00000068452 Krtap4-9B1AQA9 244 aa1.65□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Gm11555B1AQ89 175 aa1.64□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1iQ9D6P5 149 aa1.64□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Krtap19-4Q925H7 84 aa1.63□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1lQ9D1G7 135 aa1.63□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Eppk1Q8R0W0 6548 aa1.63□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1fB9EJP6 147 aa1.61□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1cQ9D1C5 147 aa1.61□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1dQ9D731 133 aa1.61□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1hQ9D6R3 140 aa1.61□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1bQ9D149 137 aa1.6□□□□□ -2.15
Cnot1-201ENSMUST00000068452 2300003K06RikA2A4M0 262 aa1.6□□□□□ -2.15
Cnot1-201ENSMUST00000068452 A0A1Y7VLE6 161 aa1.6□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1a2Q9D1K4 149 aa1.6□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Krtap4-7Q9D732 168 aa1.6□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Lce1eQ9D139 143 aa1.59□□□□□ -2.15
Cnot1-201ENSMUST00000068452 Krtap4-13Q9D7P3 165 aa1.58□□□□□ -2.16
Cnot1-201ENSMUST00000068452 Mdn1A2ANY6 5589 aaKnown RBP1.56□□□□□ -2.16
Cnot1-201ENSMUST00000068452 A030003K21RikA0A1Y7VIM3 128 aa1.56□□□□□ -2.16
Cnot1-201ENSMUST00000068452 Sprr2dO70555 85 aa1.55□□□□□ -2.16
Cnot1-201ENSMUST00000068452 Syne1Q6ZWR6 8799 aa1.54□□□□□ -2.16
Cnot1-201ENSMUST00000068452 Gpr98Q8VHN7 6298 aaKnown RBP1.54□□□□□ -2.16
Cnot1-201ENSMUST00000068452 Sprr2hO70559 108 aa1.54□□□□□ -2.16
Cnot1-201ENSMUST00000068452 Lce1a1Q9CQH5 143 aa1.52□□□□□ -2.17
Cnot1-201ENSMUST00000068452 Krtap20-2E9Q0A8 60 aa1.52□□□□□ -2.17
Cnot1-201ENSMUST00000068452 Gm11938Q9D3H4 131 aa1.51□□□□□ -2.17
Cnot1-201ENSMUST00000068452 Gm6217A0A1Y7VJK9 128 aa1.46□□□□□ -2.17
Cnot1-201ENSMUST00000068452 A0A1Y7VJ07 166 aa1.46□□□□□ -2.18
Cnot1-201ENSMUST00000068452 Lce1kJ3QP15 125 aa1.46□□□□□ -2.18
Cnot1-201ENSMUST00000068452 Krtap28-10A0A1Y7VP58 119 aa1.44□□□□□ -2.18
Cnot1-201ENSMUST00000068452 A0A1Y7VJH8 109 aa1.42□□□□□ -2.18
Cnot1-201ENSMUST00000068452 Sprr2bO70554 98 aa1.41□□□□□ -2.18
Cnot1-201ENSMUST00000068452 A030005K14RikA0A1Y7VNY1 122 aa1.36□□□□□ -2.19
Cnot1-201ENSMUST00000068452 A030014E15RikA0A1Y7VJV2 120 aa1.36□□□□□ -2.19
Cnot1-201ENSMUST00000068452 Mt1P02802 61 aaKnown RBP1.36□□□□□ -2.19
Cnot1-201ENSMUST00000068452 Gm11554B1AQB2 190 aa1.35□□□□□ -2.19
Cnot1-201ENSMUST00000068452 Fsip2A2ARZ3 6995 aa1.33□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Krtap4-16Q91W93 202 aa1.33□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Gm11559Q9D3H7 191 aa1.32□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Krtap28-13A0A087WQP5 138 aa1.3□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Kmt2dQ6PDK2 5588 aa1.29□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Gm11639A0A1D5RLM8 5808 aa1.29□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Muc16A0A140LJ72 8478 aa1.28□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Gm7544A0A1Y7VJ58 118 aa1.28□□□□□ -2.2
Cnot1-201ENSMUST00000068452 Krtap5-2Q9D5Z7 189 aa1.28□□□□□ -2.21
Cnot1-201ENSMUST00000068452 A030005L19RikA0A1Y7VIU2 113 aa1.24□□□□□ -2.21
Cnot1-201ENSMUST00000068452 Gm4553A0A1B0GSA9 284 aa1.23□□□□□ -2.21
Cnot1-201ENSMUST00000068452 ObscnA2AAJ9 8891 aaKnown RBP1.22□□□□□ -2.21
Cnot1-201ENSMUST00000068452 Gm11568A2A4M2 211 aa1.21□□□□□ -2.22
Cnot1-201ENSMUST00000068452 Krtap9-1Q64526 186 aa1.21□□□□□ -2.22
Cnot1-201ENSMUST00000068452 Hmcn1D3YXG0 5634 aa1.18□□□□□ -2.22
Cnot1-201ENSMUST00000068452 A0A286YCP9 139 aa1.16□□□□□ -2.22
Cnot1-201ENSMUST00000068452 DstQ91ZU6 7393 aaKnown RBP1.15□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Gm2431E9Q8S1 172 aa1.14□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Gm45337A0A1B0GS71 263 aa1.13□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Gm40460A0A1B0GR10 244 aa1.12□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Gm7579A0A1B0GRJ4 243 aa1.12□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Krtap5-5Q2TA51 241 aa1.12□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Krtap5-4Q62220 223 aa1.12□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Macf1Q9QXZ0 7354 aaKnown RBP1.11□□□□□ -2.23
Cnot1-201ENSMUST00000068452 Gm39115A0A1B0GSH7 232 aa1.08□□□□□ -2.24
Cnot1-201ENSMUST00000068452 AhnakE9Q616 5656 aaKnown RBP1.08□□□□□ -2.24
Cnot1-201ENSMUST00000068452 Gm10153A0A1B0GRL1 320 aa1.08□□□□□ -2.24
Cnot1-201ENSMUST00000068452 1110025L11RikO09048 78 aa1.06□□□□□ -2.24
Cnot1-201ENSMUST00000068452 Krtap6-5Q925H3 78 aa1.06□□□□□ -2.24
Cnot1-201ENSMUST00000068452 Gm45618A0A1B0GSA0 219 aa1.02□□□□□ -2.25
Cnot1-201ENSMUST00000068452 Gm10229O08631 77 aa0.99□□□□□ -2.25
Cnot1-201ENSMUST00000068452 NebE9Q1W3 7152 aa0.97□□□□□ -2.25
Cnot1-201ENSMUST00000068452 Phgr1Q8K0G7 91 aa0.95□□□□□ -2.26
Cnot1-201ENSMUST00000068452 Gm11567Q9D141 195 aa0.89□□□□□ -2.27
Cnot1-201ENSMUST00000068452 Muc19Q6PZE0 7524 aa0.89□□□□□ -2.27
Cnot1-201ENSMUST00000068452 Gm29735A0A1B0GT06 219 aa0.85□□□□□ -2.27
Cnot1-201ENSMUST00000068452 Krtap6-2O08884 159 aa0.82□□□□□ -2.28
Cnot1-201ENSMUST00000068452 Krtap21-1Q925H4 128 aa0.78□□□□□ -2.29
Cnot1-201ENSMUST00000068452 Krtap5-1Q64507 230 aa0.62□□□□□ -2.31
Cnot1-201ENSMUST00000068452 Gm4559A4IF42 199 aa0.51□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 79.2 ms