RNA–Protein interactions for RNA: ENSMUST00000063116.9

Msx1-201, Transcript of Homeobox protein MSX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1-201ENSMUST00000063116 Krtap4-9B1AQA9 244 aa6.89□□□□□ -1.31
Msx1-201ENSMUST00000063116 Mt4P47945 62 aa6.89□□□□□ -1.31
Msx1-201ENSMUST00000063116 Gm10272F7CZ33 110 aa6.84□□□□□ -1.31
Msx1-201ENSMUST00000063116 Lce1bQ9D149 137 aa6.82□□□□□ -1.32
Msx1-201ENSMUST00000063116 Fsip2A2ARZ3 6995 aa6.71□□□□□ -1.33
Msx1-201ENSMUST00000063116 Gm38119A0A0A6YX29 146 aa6.7□□□□□ -1.34
Msx1-201ENSMUST00000063116 Krtap4-13Q9D7P3 165 aa6.64□□□□□ -1.35
Msx1-201ENSMUST00000063116 2300003K06RikA2A4M0 262 aa6.54□□□□□ -1.36
Msx1-201ENSMUST00000063116 Gm11938Q9D3H4 131 aa6.54□□□□□ -1.36
Msx1-201ENSMUST00000063116 Sprr2gO70558 76 aa6.51□□□□□ -1.37
Msx1-201ENSMUST00000063116 Lce1dQ9D731 133 aa6.51□□□□□ -1.37
Msx1-201ENSMUST00000063116 Syne1Q6ZWR6 8799 aa6.5□□□□□ -1.37
Msx1-201ENSMUST00000063116 Sprr2dO70555 85 aa6.45□□□□□ -1.38
Msx1-201ENSMUST00000063116 Sprr2kO70562 68 aa6.45□□□□□ -1.38
Msx1-201ENSMUST00000063116 Lce3bQ9CQM7 98 aa6.4□□□□□ -1.38
Msx1-201ENSMUST00000063116 Lce1eQ9D139 143 aa6.36□□□□□ -1.39
Msx1-201ENSMUST00000063116 4933428G20RikQ9D3X4 101 aa6.29□□□□□ -1.4
Msx1-201ENSMUST00000063116 Krtap6-3A0A087WQL6 57 aa6.25□□□□□ -1.41
Msx1-201ENSMUST00000063116 Lce1cQ9D1C5 147 aa6.24□□□□□ -1.41
Msx1-201ENSMUST00000063116 Lce1lQ9D1G7 135 aa6.21□□□□□ -1.42
Msx1-201ENSMUST00000063116 Krtap19-4Q925H7 84 aa6.17□□□□□ -1.42
Msx1-201ENSMUST00000063116 Lce1kJ3QP15 125 aa6.13□□□□□ -1.43
Msx1-201ENSMUST00000063116 Sprr2iO70560 76 aa6.08□□□□□ -1.44
Msx1-201ENSMUST00000063116 Krtap20-2E9Q0A8 60 aa6.03□□□□□ -1.44
Msx1-201ENSMUST00000063116 Lce3cQ91V05 98 aa6□□□□□ -1.45
Msx1-201ENSMUST00000063116 Krtap5-2Q9D5Z7 189 aa6□□□□□ -1.45
Msx1-201ENSMUST00000063116 Gm11568A2A4M2 211 aa5.98□□□□□ -1.45
Msx1-201ENSMUST00000063116 Krtap9-1Q64526 186 aa5.98□□□□□ -1.45
Msx1-201ENSMUST00000063116 Lce1fB9EJP6 147 aa5.96□□□□□ -1.46
Msx1-201ENSMUST00000063116 Lce1a1Q9CQH5 143 aa5.96□□□□□ -1.46
Msx1-201ENSMUST00000063116 Mt1P02802 61 aaKnown RBP5.94□□□□□ -1.46
Msx1-201ENSMUST00000063116 Gm10100J3QK64 120 aa5.92□□□□□ -1.46
Msx1-201ENSMUST00000063116 Lce3dE9Q8V1 98 aa5.9□□□□□ -1.46
Msx1-201ENSMUST00000063116 Lce3eF8VQJ0 98 aa5.89□□□□□ -1.47
Msx1-201ENSMUST00000063116 Lce3fQ6PAI4 98 aa5.89□□□□□ -1.47
Msx1-201ENSMUST00000063116 ObscnA2AAJ9 8891 aaKnown RBP5.84□□□□□ -1.47
Msx1-201ENSMUST00000063116 Gm10142J3KMP7 120 aa5.79□□□□□ -1.48
Msx1-201ENSMUST00000063116 Gm10153A0A1B0GRL1 320 aa5.64□□□□□ -1.51
Msx1-201ENSMUST00000063116 Lce3aQ497I5 98 aa5.64□□□□□ -1.51
Msx1-201ENSMUST00000063116 Sprr2hO70559 108 aa5.6□□□□□ -1.51
Msx1-201ENSMUST00000063116 Gm11559Q9D3H7 191 aa5.58□□□□□ -1.52
Msx1-201ENSMUST00000063116 Gm4553A0A1B0GSA9 284 aa5.57□□□□□ -1.52
Msx1-201ENSMUST00000063116 Gm45337A0A1B0GS71 263 aa5.49□□□□□ -1.53
Msx1-201ENSMUST00000063116 Macf1Q9QXZ0 7354 aaKnown RBP5.44□□□□□ -1.54
Msx1-201ENSMUST00000063116 Gm2431E9Q8S1 172 aa5.41□□□□□ -1.54
Msx1-201ENSMUST00000063116 Gm11554B1AQB2 190 aa5.39□□□□□ -1.55
Msx1-201ENSMUST00000063116 Sprr2eO70556 76 aa5.36□□□□□ -1.55
Msx1-201ENSMUST00000063116 Gm40460A0A1B0GR10 244 aa5.32□□□□□ -1.56
Msx1-201ENSMUST00000063116 Gm7579A0A1B0GRJ4 243 aa5.32□□□□□ -1.56
Msx1-201ENSMUST00000063116 Krtap5-5Q2TA51 241 aa5.32□□□□□ -1.56
Msx1-201ENSMUST00000063116 Krtap5-4Q62220 223 aa5.32□□□□□ -1.56
Msx1-201ENSMUST00000063116 Mt3P28184 68 aa5.31□□□□□ -1.56
Msx1-201ENSMUST00000063116 Hmcn1D3YXG0 5634 aa5.28□□□□□ -1.56
Msx1-201ENSMUST00000063116 Kmt2dQ6PDK2 5588 aa5.21□□□□□ -1.58
Msx1-201ENSMUST00000063116 Gm45618A0A1B0GSA0 219 aa5.09□□□□□ -1.6
Msx1-201ENSMUST00000063116 Sprr2fO70557 76 aa5.04□□□□□ -1.6
Msx1-201ENSMUST00000063116 Krtap31-1Q9D644 177 aa5.03□□□□□ -1.6
Msx1-201ENSMUST00000063116 Gm39115A0A1B0GSH7 232 aa5.01□□□□□ -1.61
Msx1-201ENSMUST00000063116 Eppk1Q8R0W0 6548 aa4.88□□□□□ -1.63
Msx1-201ENSMUST00000063116 Gm10024A0A0A0MQA4 119 aa4.85□□□□□ -1.63
Msx1-201ENSMUST00000063116 DstQ91ZU6 7393 aaKnown RBP4.72□□□□□ -1.65
Msx1-201ENSMUST00000063116 Muc19Q6PZE0 7524 aa4.7□□□□□ -1.66
Msx1-201ENSMUST00000063116 Gm11639A0A1D5RLM8 5808 aa4.67□□□□□ -1.66
Msx1-201ENSMUST00000063116 Krtap4-16Q91W93 202 aa4.64□□□□□ -1.67
Msx1-201ENSMUST00000063116 Gm29735A0A1B0GT06 219 aa4.6□□□□□ -1.67
Msx1-201ENSMUST00000063116 Gm11567Q9D141 195 aa4.58□□□□□ -1.68
Msx1-201ENSMUST00000063116 AhnakE9Q616 5656 aaKnown RBP4.47□□□□□ -1.69
Msx1-201ENSMUST00000063116 1110025L11RikO09048 78 aa4.44□□□□□ -1.7
Msx1-201ENSMUST00000063116 Krtap6-5Q925H3 78 aa4.44□□□□□ -1.7
Msx1-201ENSMUST00000063116 Muc16A0A140LJ72 8478 aa4.39□□□□□ -1.71
Msx1-201ENSMUST00000063116 NebE9Q1W3 7152 aa4.29□□□□□ -1.72
Msx1-201ENSMUST00000063116 Gpr98Q8VHN7 6298 aaKnown RBP4.25□□□□□ -1.73
Msx1-201ENSMUST00000063116 Gm10229O08631 77 aa3.94□□□□□ -1.78
Msx1-201ENSMUST00000063116 Sprr2bO70554 98 aa3.89□□□□□ -1.79
Msx1-201ENSMUST00000063116 Krtap5-1Q64507 230 aa3.74□□□□□ -1.81
Msx1-201ENSMUST00000063116 Krtap21-1Q925H4 128 aa3.64□□□□□ -1.83
Msx1-201ENSMUST00000063116 Gm4559A4IF42 199 aa3.56□□□□□ -1.84
Msx1-201ENSMUST00000063116 Krtap31-2Q8CAY5 177 aa3.45□□□□□ -1.86
Msx1-201ENSMUST00000063116 Krtap6-2O08884 159 aa3.39□□□□□ -1.87
Msx1-201ENSMUST00000063116 Phgr1Q8K0G7 91 aa3.31□□□□□ -1.88
Retrieved 80 of 22,080 RNA–protein pairs in 97.9 ms