RNA–Protein interactions for RNA: ENSMUST00000060516.13

Cd44-202, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 3,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-202ENSMUST00000060516 Krtap16-3Q8C1I6 86 aa2.12□□□□□ -2.07
Cd44-202ENSMUST00000060516 Krtap4-6Q3V4B7 195 aa2.11□□□□□ -2.07
Cd44-202ENSMUST00000060516 Gm11564A2A4L9 201 aa2.1□□□□□ -2.07
Cd44-202ENSMUST00000060516 Gm11595B1AQA7 289 aa2.1□□□□□ -2.07
Cd44-202ENSMUST00000060516 Krtap4-8B1AQA8 209 aa2.1□□□□□ -2.07
Cd44-202ENSMUST00000060516 Gm45337A0A1B0GS71 263 aa2.1□□□□□ -2.07
Cd44-202ENSMUST00000060516 Krtap19-1Q925H2 87 aa2.09□□□□□ -2.08
Cd44-202ENSMUST00000060516 Krtap20-2E9Q0A8 60 aa2.07□□□□□ -2.08
Cd44-202ENSMUST00000060516 Krtap19-3Q925H6 87 aa2.05□□□□□ -2.08
Cd44-202ENSMUST00000060516 Gm10100J3QK64 120 aa2.03□□□□□ -2.08
Cd44-202ENSMUST00000060516 Mdn1A2ANY6 5589 aaKnown RBP2.03□□□□□ -2.09
Cd44-202ENSMUST00000060516 Krtap9-3Q3V2C1 136 aa2.01□□□□□ -2.09
Cd44-202ENSMUST00000060516 Gm10153A0A1B0GRL1 320 aa2□□□□□ -2.09
Cd44-202ENSMUST00000060516 Tnp1P10856 55 aa2□□□□□ -2.09
Cd44-202ENSMUST00000060516 2310046K23RikA0A0A6YVW6 87 aa1.99□□□□□ -2.09
Cd44-202ENSMUST00000060516 Lce1a2Q9D1K4 149 aa1.96□□□□□ -2.1
Cd44-202ENSMUST00000060516 Lce1iQ9D6P5 149 aa1.96□□□□□ -2.1
Cd44-202ENSMUST00000060516 Krtap5-4Q62220 223 aa1.95□□□□□ -2.1
Cd44-202ENSMUST00000060516 Muc16A0A140LJ72 8478 aa1.95□□□□□ -2.1
Cd44-202ENSMUST00000060516 Krtap8-1O08633 61 aa1.95□□□□□ -2.1
Cd44-202ENSMUST00000060516 Krtap9-5A2A5X3 358 aa1.94□□□□□ -2.1
Cd44-202ENSMUST00000060516 Krtap19-9aF8WH65 55 aa1.93□□□□□ -2.1
Cd44-202ENSMUST00000060516 Sprr2kO70562 68 aa1.93□□□□□ -2.1
Cd44-202ENSMUST00000060516 Krtap12-1Q9Z287 130 aa1.93□□□□□ -2.1
Cd44-202ENSMUST00000060516 Syne1Q6ZWR6 8799 aa1.91□□□□□ -2.1
Cd44-202ENSMUST00000060516 Sprr2gO70558 76 aa1.9□□□□□ -2.1
Cd44-202ENSMUST00000060516 Krtap19-2Q925I0 141 aa1.89□□□□□ -2.11
Cd44-202ENSMUST00000060516 Gm10142J3KMP7 120 aa1.89□□□□□ -2.11
Cd44-202ENSMUST00000060516 2300003K06RikA2A4M0 262 aa1.88□□□□□ -2.11
Cd44-202ENSMUST00000060516 Mt4P47945 62 aa1.88□□□□□ -2.11
Cd44-202ENSMUST00000060516 Macf1Q9QXZ0 7354 aaKnown RBP1.88□□□□□ -2.11
Cd44-202ENSMUST00000060516 Krtap19-9bQ99NG9 58 aa1.87□□□□□ -2.11
Cd44-202ENSMUST00000060516 Krtap5-1Q64507 230 aa1.86□□□□□ -2.11
Cd44-202ENSMUST00000060516 Fsip2A2ARZ3 6995 aa1.86□□□□□ -2.11
Cd44-202ENSMUST00000060516 Gm6358A0A087WPH4 74 aa1.83□□□□□ -2.12
Cd44-202ENSMUST00000060516 Hmcn1D3YXG0 5634 aa1.82□□□□□ -2.12
Cd44-202ENSMUST00000060516 Gm4553A0A1B0GSA9 284 aa1.81□□□□□ -2.12
Cd44-202ENSMUST00000060516 Gm11639A0A1D5RLM8 5808 aa1.79□□□□□ -2.12
Cd44-202ENSMUST00000060516 Gm11938Q9D3H4 131 aa1.76□□□□□ -2.13
Cd44-202ENSMUST00000060516 Gm4559A4IF42 199 aa1.76□□□□□ -2.13
Cd44-202ENSMUST00000060516 Gm10272F7CZ33 110 aa1.75□□□□□ -2.13
Cd44-202ENSMUST00000060516 DstQ91ZU6 7393 aaKnown RBP1.75□□□□□ -2.13
Cd44-202ENSMUST00000060516 Sprr2dO70555 85 aa1.74□□□□□ -2.13
Cd44-202ENSMUST00000060516 Krtap5-2Q9D5Z7 189 aa1.74□□□□□ -2.13
Cd44-202ENSMUST00000060516 Mt3P28184 68 aa1.74□□□□□ -2.13
Cd44-202ENSMUST00000060516 Krtap9-1Q64526 186 aa1.73□□□□□ -2.13
Cd44-202ENSMUST00000060516 Gpr98Q8VHN7 6298 aaKnown RBP1.72□□□□□ -2.13
Cd44-202ENSMUST00000060516 Mt2P02798 61 aa1.7□□□□□ -2.14
Cd44-202ENSMUST00000060516 4933428G20RikQ9D3X4 101 aa1.7□□□□□ -2.14
Cd44-202ENSMUST00000060516 Kmt2dQ6PDK2 5588 aa1.68□□□□□ -2.14
Cd44-202ENSMUST00000060516 Krtap22-2J3QNX6 67 aa1.67□□□□□ -2.14
Cd44-202ENSMUST00000060516 Muc19Q6PZE0 7524 aa1.65□□□□□ -2.15
Cd44-202ENSMUST00000060516 Krtap5-5Q2TA51 241 aa1.62□□□□□ -2.15
Cd44-202ENSMUST00000060516 Sprr2iO70560 76 aa1.61□□□□□ -2.15
Cd44-202ENSMUST00000060516 Gm40460A0A1B0GR10 244 aa1.6□□□□□ -2.15
Cd44-202ENSMUST00000060516 Gm7579A0A1B0GRJ4 243 aa1.6□□□□□ -2.15
Cd44-202ENSMUST00000060516 Krtap4-16Q91W93 202 aa1.58□□□□□ -2.16
Cd44-202ENSMUST00000060516 Krtap19-4Q925H7 84 aa1.57□□□□□ -2.16
Cd44-202ENSMUST00000060516 Gm11568A2A4M2 211 aa1.55□□□□□ -2.16
Cd44-202ENSMUST00000060516 ObscnA2AAJ9 8891 aaKnown RBP1.53□□□□□ -2.16
Cd44-202ENSMUST00000060516 Sprr2eO70556 76 aa1.52□□□□□ -2.17
Cd44-202ENSMUST00000060516 Sprr2hO70559 108 aa1.52□□□□□ -2.17
Cd44-202ENSMUST00000060516 Lce3bQ9CQM7 98 aa1.51□□□□□ -2.17
Cd44-202ENSMUST00000060516 NebE9Q1W3 7152 aa1.51□□□□□ -2.17
Cd44-202ENSMUST00000060516 Sprr2fO70557 76 aa1.5□□□□□ -2.17
Cd44-202ENSMUST00000060516 AhnakE9Q616 5656 aaKnown RBP1.49□□□□□ -2.17
Cd44-202ENSMUST00000060516 Lce3dE9Q8V1 98 aa1.46□□□□□ -2.18
Cd44-202ENSMUST00000060516 Lce3cQ91V05 98 aa1.46□□□□□ -2.18
Cd44-202ENSMUST00000060516 Lce3eF8VQJ0 98 aa1.44□□□□□ -2.18
Cd44-202ENSMUST00000060516 Lce3fQ6PAI4 98 aa1.44□□□□□ -2.18
Cd44-202ENSMUST00000060516 Lce3aQ497I5 98 aa1.41□□□□□ -2.18
Cd44-202ENSMUST00000060516 Mt1P02802 61 aaKnown RBP1.3□□□□□ -2.2
Cd44-202ENSMUST00000060516 Gm10024A0A0A0MQA4 119 aa1.27□□□□□ -2.21
Cd44-202ENSMUST00000060516 Gm10229O08631 77 aa1.05□□□□□ -2.24
Cd44-202ENSMUST00000060516 1110025L11RikO09048 78 aa1.02□□□□□ -2.25
Cd44-202ENSMUST00000060516 Krtap6-5Q925H3 78 aa1.02□□□□□ -2.25
Cd44-202ENSMUST00000060516 Sprr2bO70554 98 aa0.98□□□□□ -2.25
Cd44-202ENSMUST00000060516 Phgr1Q8K0G7 91 aa0.89□□□□□ -2.27
Cd44-202ENSMUST00000060516 Krtap21-1Q925H4 128 aa0.86□□□□□ -2.27
Cd44-202ENSMUST00000060516 Krtap6-2O08884 159 aa0.76□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 62.2 ms