RNA–Protein interactions for RNA: ENSMUST00000060397.12

Rfx4-202, Transcript of Transcription factor RFX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rfx4, Length 3,534 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4-202ENSMUST00000060397 Gm11595B1AQA7 289 aa2.28□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Krtap4-8B1AQA8 209 aa2.28□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Lce1bQ9D149 137 aa2.25□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Krtap8-1O08633 61 aa2.24□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Krtap9-5A2A5X3 358 aa2.23□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Krtap19-9bQ99NG9 58 aa2.22□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Lce1hQ9D6R3 140 aa2.22□□□□□ -2.05
Rfx4-202ENSMUST00000060397 Gm11567Q9D141 195 aa2.21□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Lce1iQ9D6P5 149 aa2.21□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Gm10272F7CZ33 110 aa2.2□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Sprr2gO70558 76 aa2.2□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Krtap19-9aF8WH65 55 aa2.2□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Krtap19-2Q925I0 141 aa2.2□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Lce1a2Q9D1K4 149 aa2.19□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Gm2431E9Q8S1 172 aa2.18□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Lce1cQ9D1C5 147 aa2.18□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Sprr2iO70560 76 aa2.17□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Sprr2kO70562 68 aa2.17□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Gm11938Q9D3H4 131 aa2.15□□□□□ -2.06
Rfx4-202ENSMUST00000060397 Fsip2A2ARZ3 6995 aa2.14□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Lce1eQ9D139 143 aa2.14□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Krtap20-2E9Q0A8 60 aa2.13□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Krtap9-3Q3V2C1 136 aa2.12□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Krtap4-13Q9D7P3 165 aa2.12□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Gm6358A0A087WPH4 74 aa2.11□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Gpr98Q8VHN7 6298 aaKnown RBP2.1□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Lce1fB9EJP6 147 aa2.1□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Gm10100J3QK64 120 aa2.09□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Sprr2fO70557 76 aa2.09□□□□□ -2.07
Rfx4-202ENSMUST00000060397 Mt4P47945 62 aa2.08□□□□□ -2.08
Rfx4-202ENSMUST00000060397 Sprr2dO70555 85 aa2.07□□□□□ -2.08
Rfx4-202ENSMUST00000060397 Gm10142J3KMP7 120 aa2.07□□□□□ -2.08
Rfx4-202ENSMUST00000060397 Gm45337A0A1B0GS71 263 aa2.05□□□□□ -2.08
Rfx4-202ENSMUST00000060397 Mt2P02798 61 aa2.02□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Gm11559Q9D3H7 191 aa2.01□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Gm11639A0A1D5RLM8 5808 aa1.98□□□□□ -2.09
Rfx4-202ENSMUST00000060397 2300003K06RikA2A4M0 262 aa1.97□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Lce3bQ9CQM7 98 aa1.97□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Lce3dE9Q8V1 98 aa1.97□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Lce3cQ91V05 98 aa1.97□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Muc16A0A140LJ72 8478 aa1.97□□□□□ -2.09
Rfx4-202ENSMUST00000060397 Syne1Q6ZWR6 8799 aa1.95□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Gm10024A0A0A0MQA4 119 aa1.95□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Krtap22-2J3QNX6 67 aa1.95□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Sprr2eO70556 76 aa1.94□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Lce3eF8VQJ0 98 aa1.94□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Lce3fQ6PAI4 98 aa1.94□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Krtap4-16Q91W93 202 aa1.93□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Krtap5-4Q62220 223 aa1.93□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Lce3aQ497I5 98 aa1.92□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Gm10153A0A1B0GRL1 320 aa1.92□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Lce1kJ3QP15 125 aa1.91□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Krtap19-4Q925H7 84 aa1.9□□□□□ -2.1
Rfx4-202ENSMUST00000060397 Sprr2hO70559 108 aa1.88□□□□□ -2.11
Rfx4-202ENSMUST00000060397 Krtap5-1Q64507 230 aa1.88□□□□□ -2.11
Rfx4-202ENSMUST00000060397 Macf1Q9QXZ0 7354 aaKnown RBP1.88□□□□□ -2.11
Rfx4-202ENSMUST00000060397 Hmcn1D3YXG0 5634 aa1.84□□□□□ -2.11
Rfx4-202ENSMUST00000060397 Gm11568A2A4M2 211 aa1.82□□□□□ -2.12
Rfx4-202ENSMUST00000060397 Kmt2dQ6PDK2 5588 aa1.81□□□□□ -2.12
Rfx4-202ENSMUST00000060397 Gm4559A4IF42 199 aa1.79□□□□□ -2.12
Rfx4-202ENSMUST00000060397 Krtap9-1Q64526 186 aa1.78□□□□□ -2.12
Rfx4-202ENSMUST00000060397 Gm4553A0A1B0GSA9 284 aa1.78□□□□□ -2.12
Rfx4-202ENSMUST00000060397 Krtap5-2Q9D5Z7 189 aa1.73□□□□□ -2.13
Rfx4-202ENSMUST00000060397 Muc19Q6PZE0 7524 aa1.72□□□□□ -2.13
Rfx4-202ENSMUST00000060397 ObscnA2AAJ9 8891 aaKnown RBP1.69□□□□□ -2.14
Rfx4-202ENSMUST00000060397 DstQ91ZU6 7393 aaKnown RBP1.68□□□□□ -2.14
Rfx4-202ENSMUST00000060397 Krtap5-5Q2TA51 241 aa1.64□□□□□ -2.15
Rfx4-202ENSMUST00000060397 Gm40460A0A1B0GR10 244 aa1.54□□□□□ -2.16
Rfx4-202ENSMUST00000060397 Gm7579A0A1B0GRJ4 243 aa1.54□□□□□ -2.16
Rfx4-202ENSMUST00000060397 NebE9Q1W3 7152 aa1.54□□□□□ -2.16
Rfx4-202ENSMUST00000060397 Mt1P02802 61 aaKnown RBP1.52□□□□□ -2.17
Rfx4-202ENSMUST00000060397 AhnakE9Q616 5656 aaKnown RBP1.51□□□□□ -2.17
Rfx4-202ENSMUST00000060397 Mt3P28184 68 aa1.39□□□□□ -2.19
Rfx4-202ENSMUST00000060397 Sprr2bO70554 98 aa1.26□□□□□ -2.21
Rfx4-202ENSMUST00000060397 Phgr1Q8K0G7 91 aa1.18□□□□□ -2.22
Rfx4-202ENSMUST00000060397 1110025L11RikO09048 78 aa1.14□□□□□ -2.23
Rfx4-202ENSMUST00000060397 Krtap6-5Q925H3 78 aa1.14□□□□□ -2.23
Rfx4-202ENSMUST00000060397 Gm10229O08631 77 aa1□□□□□ -2.25
Rfx4-202ENSMUST00000060397 Krtap21-1Q925H4 128 aa0.95□□□□□ -2.26
Rfx4-202ENSMUST00000060397 Krtap6-2O08884 159 aa0.86□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 109 ms