RNA–Protein interactions for RNA: ENSMUST00000059272.9

Hoxd9-201, Transcript of Homeobox protein Hox-D9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd9, Length 2,136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9-201ENSMUST00000059272 Lce1dQ9D731 133 aa7.81□□□□□ -1.16
Hoxd9-201ENSMUST00000059272 Lce1lQ9D1G7 135 aa7.81□□□□□ -1.16
Hoxd9-201ENSMUST00000059272 Gm11938Q9D3H4 131 aa7.78□□□□□ -1.16
Hoxd9-201ENSMUST00000059272 4933428G20RikQ9D3X4 101 aa7.66□□□□□ -1.18
Hoxd9-201ENSMUST00000059272 Syne1Q6ZWR6 8799 aa7.64□□□□□ -1.19
Hoxd9-201ENSMUST00000059272 Lce3bQ9CQM7 98 aa7.6□□□□□ -1.19
Hoxd9-201ENSMUST00000059272 Lce1eQ9D139 143 aa7.6□□□□□ -1.19
Hoxd9-201ENSMUST00000059272 A0A1Y7VJH8 109 aa7.54□□□□□ -1.2
Hoxd9-201ENSMUST00000059272 Krtap19-4Q925H7 84 aa7.43□□□□□ -1.22
Hoxd9-201ENSMUST00000059272 Lce1kJ3QP15 125 aa7.42□□□□□ -1.22
Hoxd9-201ENSMUST00000059272 Krtap20-2E9Q0A8 60 aa7.41□□□□□ -1.22
Hoxd9-201ENSMUST00000059272 Sprr2iO70560 76 aa7.41□□□□□ -1.22
Hoxd9-201ENSMUST00000059272 Lce1a1Q9CQH5 143 aa7.34□□□□□ -1.23
Hoxd9-201ENSMUST00000059272 Lce1cQ9D1C5 147 aa7.33□□□□□ -1.24
Hoxd9-201ENSMUST00000059272 Krtap5-2Q9D5Z7 189 aa7.33□□□□□ -1.24
Hoxd9-201ENSMUST00000059272 Gm11568A2A4M2 211 aa7.2□□□□□ -1.26
Hoxd9-201ENSMUST00000059272 Krtap9-1Q64526 186 aa7.2□□□□□ -1.26
Hoxd9-201ENSMUST00000059272 Lce1fB9EJP6 147 aa7.13□□□□□ -1.27
Hoxd9-201ENSMUST00000059272 Gm10100J3QK64 120 aa7.1□□□□□ -1.27
Hoxd9-201ENSMUST00000059272 Mt1P02802 61 aaKnown RBP7.02□□□□□ -1.29
Hoxd9-201ENSMUST00000059272 Lce3cQ91V05 98 aa7.02□□□□□ -1.29
Hoxd9-201ENSMUST00000059272 Gm10142J3KMP7 120 aa6.96□□□□□ -1.3
Hoxd9-201ENSMUST00000059272 Gm11559Q9D3H7 191 aa6.94□□□□□ -1.3
Hoxd9-201ENSMUST00000059272 Lce3eF8VQJ0 98 aa6.91□□□□□ -1.3
Hoxd9-201ENSMUST00000059272 Lce3fQ6PAI4 98 aa6.91□□□□□ -1.3
Hoxd9-201ENSMUST00000059272 Lce3dE9Q8V1 98 aa6.9□□□□□ -1.3
Hoxd9-201ENSMUST00000059272 Gm4553A0A1B0GSA9 284 aa6.88□□□□□ -1.31
Hoxd9-201ENSMUST00000059272 Sprr2hO70559 108 aa6.79□□□□□ -1.32
Hoxd9-201ENSMUST00000059272 Gm10153A0A1B0GRL1 320 aa6.76□□□□□ -1.33
Hoxd9-201ENSMUST00000059272 Macf1Q9QXZ0 7354 aaKnown RBP6.74□□□□□ -1.33
Hoxd9-201ENSMUST00000059272 Gm11554B1AQB2 190 aa6.73□□□□□ -1.33
Hoxd9-201ENSMUST00000059272 ObscnA2AAJ9 8891 aaKnown RBP6.73□□□□□ -1.33
Hoxd9-201ENSMUST00000059272 Gm45337A0A1B0GS71 263 aa6.71□□□□□ -1.34
Hoxd9-201ENSMUST00000059272 Gm2431E9Q8S1 172 aa6.66□□□□□ -1.34
Hoxd9-201ENSMUST00000059272 Lce3aQ497I5 98 aa6.62□□□□□ -1.35
Hoxd9-201ENSMUST00000059272 A030005L19RikA0A1Y7VIU2 113 aa6.57□□□□□ -1.36
Hoxd9-201ENSMUST00000059272 Sprr2eO70556 76 aa6.55□□□□□ -1.36
Hoxd9-201ENSMUST00000059272 Gm40460A0A1B0GR10 244 aa6.49□□□□□ -1.37
Hoxd9-201ENSMUST00000059272 Gm7579A0A1B0GRJ4 243 aa6.49□□□□□ -1.37
Hoxd9-201ENSMUST00000059272 Krtap5-5Q2TA51 241 aa6.49□□□□□ -1.37
Hoxd9-201ENSMUST00000059272 Krtap5-4Q62220 223 aa6.49□□□□□ -1.37
Hoxd9-201ENSMUST00000059272 Kmt2dQ6PDK2 5588 aa6.48□□□□□ -1.37
Hoxd9-201ENSMUST00000059272 Hmcn1D3YXG0 5634 aa6.42□□□□□ -1.38
Hoxd9-201ENSMUST00000059272 Mt3P28184 68 aa6.37□□□□□ -1.39
Hoxd9-201ENSMUST00000059272 Eppk1Q8R0W0 6548 aa6.3□□□□□ -1.4
Hoxd9-201ENSMUST00000059272 Gm39115A0A1B0GSH7 232 aa6.2□□□□□ -1.42
Hoxd9-201ENSMUST00000059272 A0A1Y7VLE6 161 aa6.2□□□□□ -1.42
Hoxd9-201ENSMUST00000059272 Sprr2fO70557 76 aa6.2□□□□□ -1.42
Hoxd9-201ENSMUST00000059272 Krtap31-1Q9D644 177 aa6.09□□□□□ -1.43
Hoxd9-201ENSMUST00000059272 Muc19Q6PZE0 7524 aa6□□□□□ -1.45
Hoxd9-201ENSMUST00000059272 Gm11639A0A1D5RLM8 5808 aa5.92□□□□□ -1.46
Hoxd9-201ENSMUST00000059272 DstQ91ZU6 7393 aaKnown RBP5.92□□□□□ -1.46
Hoxd9-201ENSMUST00000059272 Gm10024A0A0A0MQA4 119 aa5.77□□□□□ -1.49
Hoxd9-201ENSMUST00000059272 Krtap4-16Q91W93 202 aa5.6□□□□□ -1.51
Hoxd9-201ENSMUST00000059272 Gm45618A0A1B0GSA0 219 aa5.58□□□□□ -1.52
Hoxd9-201ENSMUST00000059272 AhnakE9Q616 5656 aaKnown RBP5.51□□□□□ -1.53
Hoxd9-201ENSMUST00000059272 NebE9Q1W3 7152 aa5.48□□□□□ -1.53
Hoxd9-201ENSMUST00000059272 Gpr98Q8VHN7 6298 aaKnown RBP5.48□□□□□ -1.53
Hoxd9-201ENSMUST00000059272 1110025L11RikO09048 78 aa5.18□□□□□ -1.58
Hoxd9-201ENSMUST00000059272 Krtap6-5Q925H3 78 aa5.18□□□□□ -1.58
Hoxd9-201ENSMUST00000059272 A0A1Y7VJ07 166 aa5.12□□□□□ -1.59
Hoxd9-201ENSMUST00000059272 Muc16A0A140LJ72 8478 aa5.03□□□□□ -1.6
Hoxd9-201ENSMUST00000059272 Gm29735A0A1B0GT06 219 aa4.84□□□□□ -1.64
Hoxd9-201ENSMUST00000059272 Sprr2bO70554 98 aa4.73□□□□□ -1.65
Hoxd9-201ENSMUST00000059272 Gm11567Q9D141 195 aa4.69□□□□□ -1.66
Hoxd9-201ENSMUST00000059272 Gm10229O08631 77 aa4.62□□□□□ -1.67
Hoxd9-201ENSMUST00000059272 Krtap31-2Q8CAY5 177 aa4.57□□□□□ -1.68
Hoxd9-201ENSMUST00000059272 Krtap21-1Q925H4 128 aa4.24□□□□□ -1.73
Hoxd9-201ENSMUST00000059272 A0A286YCP9 139 aa4.02□□□□□ -1.77
Hoxd9-201ENSMUST00000059272 Krtap6-2O08884 159 aa4.02□□□□□ -1.77
Hoxd9-201ENSMUST00000059272 Phgr1Q8K0G7 91 aa4□□□□□ -1.77
Hoxd9-201ENSMUST00000059272 Krtap28-10A0A1Y7VP58 119 aa3.69□□□□□ -1.82
Hoxd9-201ENSMUST00000059272 Krtap28-13A0A087WQP5 138 aa3.68□□□□□ -1.82
Hoxd9-201ENSMUST00000059272 A030005K14RikA0A1Y7VNY1 122 aa3.62□□□□□ -1.83
Hoxd9-201ENSMUST00000059272 A030003K21RikA0A1Y7VIM3 128 aa3.47□□□□□ -1.85
Hoxd9-201ENSMUST00000059272 Krtap5-1Q64507 230 aa3.35□□□□□ -1.87
Hoxd9-201ENSMUST00000059272 A030014E15RikA0A1Y7VJV2 120 aa3.29□□□□□ -1.88
Hoxd9-201ENSMUST00000059272 Gm7544A0A1Y7VJ58 118 aa3.27□□□□□ -1.89
Hoxd9-201ENSMUST00000059272 Gm4559A4IF42 199 aa2.8□□□□□ -1.96
Hoxd9-201ENSMUST00000059272 Gm6217A0A1Y7VJK9 128 aa2.66□□□□□ -1.98
Retrieved 80 of 22,080 RNA–protein pairs in 11.7 ms