RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 Krtap4-13Q9D7P3 165 aa6.86□□□□□ -1.31
Ldb1-202ENSMUST00000056931 2300003K06RikA2A4M0 262 aa6.7□□□□□ -1.34
Ldb1-202ENSMUST00000056931 Syne1Q6ZWR6 8799 aa6.7□□□□□ -1.34
Ldb1-202ENSMUST00000056931 Sprr2kO70562 68 aa6.65□□□□□ -1.35
Ldb1-202ENSMUST00000056931 Lce1cQ9D1C5 147 aa6.55□□□□□ -1.36
Ldb1-202ENSMUST00000056931 Gm7544A0A1Y7VJ58 118 aa6.54□□□□□ -1.36
Ldb1-202ENSMUST00000056931 Krtap4-7Q9D732 168 aa6.53□□□□□ -1.36
Ldb1-202ENSMUST00000056931 Lce3bQ9CQM7 98 aa6.5□□□□□ -1.37
Ldb1-202ENSMUST00000056931 Krtap19-4Q925H7 84 aa6.47□□□□□ -1.37
Ldb1-202ENSMUST00000056931 Krtap6-3A0A087WQL6 57 aa6.43□□□□□ -1.38
Ldb1-202ENSMUST00000056931 Lce1lQ9D1G7 135 aa6.42□□□□□ -1.38
Ldb1-202ENSMUST00000056931 Gm10100J3QK64 120 aa6.39□□□□□ -1.39
Ldb1-202ENSMUST00000056931 Sprr2iO70560 76 aa6.32□□□□□ -1.4
Ldb1-202ENSMUST00000056931 Lce1fB9EJP6 147 aa6.31□□□□□ -1.4
Ldb1-202ENSMUST00000056931 Lce1a1Q9CQH5 143 aa6.31□□□□□ -1.4
Ldb1-202ENSMUST00000056931 A0A286YCP9 139 aa6.3□□□□□ -1.4
Ldb1-202ENSMUST00000056931 Gm10142J3KMP7 120 aa6.28□□□□□ -1.4
Ldb1-202ENSMUST00000056931 A0A1Y7VJH8 109 aa6.26□□□□□ -1.41
Ldb1-202ENSMUST00000056931 Lce1kJ3QP15 125 aa6.25□□□□□ -1.41
Ldb1-202ENSMUST00000056931 Krtap20-2E9Q0A8 60 aa6.16□□□□□ -1.42
Ldb1-202ENSMUST00000056931 Lce3cQ91V05 98 aa6.09□□□□□ -1.43
Ldb1-202ENSMUST00000056931 Sprr2hO70559 108 aa6.09□□□□□ -1.44
Ldb1-202ENSMUST00000056931 Lce3dE9Q8V1 98 aa6.06□□□□□ -1.44
Ldb1-202ENSMUST00000056931 Gm11568A2A4M2 211 aa6.04□□□□□ -1.44
Ldb1-202ENSMUST00000056931 Krtap9-1Q64526 186 aa6.04□□□□□ -1.44
Ldb1-202ENSMUST00000056931 Sprr2eO70556 76 aa6.04□□□□□ -1.44
Ldb1-202ENSMUST00000056931 Krtap5-2Q9D5Z7 189 aa6.04□□□□□ -1.44
Ldb1-202ENSMUST00000056931 Sprr2fO70557 76 aa5.99□□□□□ -1.45
Ldb1-202ENSMUST00000056931 Mt1P02802 61 aaKnown RBP5.97□□□□□ -1.45
Ldb1-202ENSMUST00000056931 Lce3eF8VQJ0 98 aa5.96□□□□□ -1.46
Ldb1-202ENSMUST00000056931 Lce3fQ6PAI4 98 aa5.96□□□□□ -1.46
Ldb1-202ENSMUST00000056931 A030003K21RikA0A1Y7VIM3 128 aa5.94□□□□□ -1.46
Ldb1-202ENSMUST00000056931 Gm6217A0A1Y7VJK9 128 aa5.94□□□□□ -1.46
Ldb1-202ENSMUST00000056931 ObscnA2AAJ9 8891 aaKnown RBP5.93□□□□□ -1.46
Ldb1-202ENSMUST00000056931 Krtap28-13A0A087WQP5 138 aa5.92□□□□□ -1.46
Ldb1-202ENSMUST00000056931 Lce3aQ497I5 98 aa5.83□□□□□ -1.48
Ldb1-202ENSMUST00000056931 Macf1Q9QXZ0 7354 aaKnown RBP5.82□□□□□ -1.48
Ldb1-202ENSMUST00000056931 A030005L19RikA0A1Y7VIU2 113 aa5.81□□□□□ -1.48
Ldb1-202ENSMUST00000056931 Krtap28-10A0A1Y7VP58 119 aa5.79□□□□□ -1.48
Ldb1-202ENSMUST00000056931 A0A1Y7VJ07 166 aa5.76□□□□□ -1.49
Ldb1-202ENSMUST00000056931 Krtap31-1Q9D644 177 aa5.74□□□□□ -1.49
Ldb1-202ENSMUST00000056931 Gm11559Q9D3H7 191 aa5.69□□□□□ -1.5
Ldb1-202ENSMUST00000056931 A030005K14RikA0A1Y7VNY1 122 aa5.67□□□□□ -1.5
Ldb1-202ENSMUST00000056931 Gm10153A0A1B0GRL1 320 aa5.64□□□□□ -1.51
Ldb1-202ENSMUST00000056931 Gm4553A0A1B0GSA9 284 aa5.63□□□□□ -1.51
Ldb1-202ENSMUST00000056931 Gm11554B1AQB2 190 aa5.58□□□□□ -1.52
Ldb1-202ENSMUST00000056931 Gm45337A0A1B0GS71 263 aa5.51□□□□□ -1.53
Ldb1-202ENSMUST00000056931 Gm2431E9Q8S1 172 aa5.51□□□□□ -1.53
Ldb1-202ENSMUST00000056931 Hmcn1D3YXG0 5634 aa5.5□□□□□ -1.53
Ldb1-202ENSMUST00000056931 Krtap4-16Q91W93 202 aa5.43□□□□□ -1.54
Ldb1-202ENSMUST00000056931 Kmt2dQ6PDK2 5588 aa5.4□□□□□ -1.55
Ldb1-202ENSMUST00000056931 Mt3P28184 68 aa5.35□□□□□ -1.55
Ldb1-202ENSMUST00000056931 Gm40460A0A1B0GR10 244 aa5.32□□□□□ -1.56
Ldb1-202ENSMUST00000056931 Gm7579A0A1B0GRJ4 243 aa5.32□□□□□ -1.56
Ldb1-202ENSMUST00000056931 Krtap5-5Q2TA51 241 aa5.32□□□□□ -1.56
Ldb1-202ENSMUST00000056931 Krtap5-4Q62220 223 aa5.32□□□□□ -1.56
Ldb1-202ENSMUST00000056931 Eppk1Q8R0W0 6548 aa5.25□□□□□ -1.57
Ldb1-202ENSMUST00000056931 Muc19Q6PZE0 7524 aa5.12□□□□□ -1.59
Ldb1-202ENSMUST00000056931 Gm10024A0A0A0MQA4 119 aa5.09□□□□□ -1.59
Ldb1-202ENSMUST00000056931 Gm39115A0A1B0GSH7 232 aa5.06□□□□□ -1.6
Ldb1-202ENSMUST00000056931 DstQ91ZU6 7393 aaKnown RBP5.01□□□□□ -1.61
Ldb1-202ENSMUST00000056931 Gm11639A0A1D5RLM8 5808 aa4.98□□□□□ -1.61
Ldb1-202ENSMUST00000056931 Muc16A0A140LJ72 8478 aa4.72□□□□□ -1.65
Ldb1-202ENSMUST00000056931 Krtap31-2Q8CAY5 177 aa4.7□□□□□ -1.66
Ldb1-202ENSMUST00000056931 NebE9Q1W3 7152 aa4.65□□□□□ -1.66
Ldb1-202ENSMUST00000056931 AhnakE9Q616 5656 aaKnown RBP4.65□□□□□ -1.66
Ldb1-202ENSMUST00000056931 Gpr98Q8VHN7 6298 aaKnown RBP4.6□□□□□ -1.67
Ldb1-202ENSMUST00000056931 A030014E15RikA0A1Y7VJV2 120 aa4.55□□□□□ -1.68
Ldb1-202ENSMUST00000056931 Gm45618A0A1B0GSA0 219 aa4.5□□□□□ -1.69
Ldb1-202ENSMUST00000056931 1110025L11RikO09048 78 aa4.44□□□□□ -1.7
Ldb1-202ENSMUST00000056931 Krtap6-5Q925H3 78 aa4.44□□□□□ -1.7
Ldb1-202ENSMUST00000056931 Sprr2bO70554 98 aa4.11□□□□□ -1.75
Ldb1-202ENSMUST00000056931 Gm11567Q9D141 195 aa3.97□□□□□ -1.77
Ldb1-202ENSMUST00000056931 Gm29735A0A1B0GT06 219 aa3.96□□□□□ -1.78
Ldb1-202ENSMUST00000056931 Gm10229O08631 77 aa3.95□□□□□ -1.78
Ldb1-202ENSMUST00000056931 Krtap21-1Q925H4 128 aa3.63□□□□□ -1.83
Ldb1-202ENSMUST00000056931 Phgr1Q8K0G7 91 aa3.58□□□□□ -1.84
Ldb1-202ENSMUST00000056931 Krtap6-2O08884 159 aa3.41□□□□□ -1.86
Ldb1-202ENSMUST00000056931 Krtap5-1Q64507 230 aa2.73□□□□□ -1.97
Ldb1-202ENSMUST00000056931 Gm4559A4IF42 199 aa2.35□□□□□ -2.03
Retrieved 80 of 22,080 RNA–protein pairs in 42.3 ms