RNA–Protein interactions for RNA: ENSMUST00000054963.9

Fdft1-201, Transcript of Squalene synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fdft1, Length 2,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1-201ENSMUST00000054963 Gm11564A2A4L9 201 aa3.42□□□□□ -1.86
Fdft1-201ENSMUST00000054963 Gm11595B1AQA7 289 aa3.42□□□□□ -1.86
Fdft1-201ENSMUST00000054963 Krtap4-8B1AQA8 209 aa3.42□□□□□ -1.86
Fdft1-201ENSMUST00000054963 Krtap19-4Q925H7 84 aa3.42□□□□□ -1.86
Fdft1-201ENSMUST00000054963 Mt4P47945 62 aa3.39□□□□□ -1.87
Fdft1-201ENSMUST00000054963 Sprr2iO70560 76 aa3.37□□□□□ -1.87
Fdft1-201ENSMUST00000054963 Lce3cQ91V05 98 aa3.37□□□□□ -1.87
Fdft1-201ENSMUST00000054963 Krtap4-9B1AQA9 244 aa3.35□□□□□ -1.87
Fdft1-201ENSMUST00000054963 Lce3dE9Q8V1 98 aa3.34□□□□□ -1.87
Fdft1-201ENSMUST00000054963 Gm38119A0A0A6YX29 146 aa3.33□□□□□ -1.88
Fdft1-201ENSMUST00000054963 Lce3eF8VQJ0 98 aa3.29□□□□□ -1.88
Fdft1-201ENSMUST00000054963 Lce3fQ6PAI4 98 aa3.29□□□□□ -1.88
Fdft1-201ENSMUST00000054963 Sprr2hO70559 108 aa3.28□□□□□ -1.88
Fdft1-201ENSMUST00000054963 ObscnA2AAJ9 8891 aaKnown RBP3.28□□□□□ -1.88
Fdft1-201ENSMUST00000054963 Krtap31-2Q8CAY5 177 aa3.26□□□□□ -1.89
Fdft1-201ENSMUST00000054963 Lce1bQ9D149 137 aa3.25□□□□□ -1.89
Fdft1-201ENSMUST00000054963 Krtap4-13Q9D7P3 165 aa3.25□□□□□ -1.89
Fdft1-201ENSMUST00000054963 Sprr2eO70556 76 aa3.22□□□□□ -1.89
Fdft1-201ENSMUST00000054963 Sprr2fO70557 76 aa3.22□□□□□ -1.89
Fdft1-201ENSMUST00000054963 Lce3aQ497I5 98 aa3.21□□□□□ -1.9
Fdft1-201ENSMUST00000054963 2300003K06RikA2A4M0 262 aa3.2□□□□□ -1.9
Fdft1-201ENSMUST00000054963 Krtap31-1Q9D644 177 aa3.19□□□□□ -1.9
Fdft1-201ENSMUST00000054963 Sprr2kO70562 68 aa3.19□□□□□ -1.9
Fdft1-201ENSMUST00000054963 A0A1Y7VJH8 109 aa3.16□□□□□ -1.9
Fdft1-201ENSMUST00000054963 Krtap4-16Q91W93 202 aa3.12□□□□□ -1.91
Fdft1-201ENSMUST00000054963 Lce1kJ3QP15 125 aa3.08□□□□□ -1.92
Fdft1-201ENSMUST00000054963 Lce1lQ9D1G7 135 aa3.06□□□□□ -1.92
Fdft1-201ENSMUST00000054963 Mt1P02802 61 aaKnown RBP3.03□□□□□ -1.92
Fdft1-201ENSMUST00000054963 Muc16A0A140LJ72 8478 aa3.01□□□□□ -1.93
Fdft1-201ENSMUST00000054963 A0A1Y7VLE6 161 aa3□□□□□ -1.93
Fdft1-201ENSMUST00000054963 Krtap28-10A0A1Y7VP58 119 aa2.99□□□□□ -1.93
Fdft1-201ENSMUST00000054963 Krtap28-13A0A087WQP5 138 aa2.98□□□□□ -1.93
Fdft1-201ENSMUST00000054963 A030005K14RikA0A1Y7VNY1 122 aa2.98□□□□□ -1.93
Fdft1-201ENSMUST00000054963 Krtap20-2E9Q0A8 60 aa2.94□□□□□ -1.94
Fdft1-201ENSMUST00000054963 Krtap6-3A0A087WQL6 57 aa2.94□□□□□ -1.94
Fdft1-201ENSMUST00000054963 Macf1Q9QXZ0 7354 aaKnown RBP2.94□□□□□ -1.94
Fdft1-201ENSMUST00000054963 Gm11568A2A4M2 211 aa2.9□□□□□ -1.95
Fdft1-201ENSMUST00000054963 Krtap9-1Q64526 186 aa2.9□□□□□ -1.95
Fdft1-201ENSMUST00000054963 Krtap5-2Q9D5Z7 189 aa2.83□□□□□ -1.96
Fdft1-201ENSMUST00000054963 Gm10024A0A0A0MQA4 119 aa2.78□□□□□ -1.97
Fdft1-201ENSMUST00000054963 Kmt2dQ6PDK2 5588 aa2.73□□□□□ -1.97
Fdft1-201ENSMUST00000054963 Gm7544A0A1Y7VJ58 118 aa2.71□□□□□ -1.97
Fdft1-201ENSMUST00000054963 A0A1Y7VJ07 166 aa2.71□□□□□ -1.98
Fdft1-201ENSMUST00000054963 Gm11559Q9D3H7 191 aa2.71□□□□□ -1.98
Fdft1-201ENSMUST00000054963 Gm10153A0A1B0GRL1 320 aa2.68□□□□□ -1.98
Fdft1-201ENSMUST00000054963 A030005L19RikA0A1Y7VIU2 113 aa2.68□□□□□ -1.98
Fdft1-201ENSMUST00000054963 Hmcn1D3YXG0 5634 aa2.67□□□□□ -1.98
Fdft1-201ENSMUST00000054963 Gm11554B1AQB2 190 aa2.65□□□□□ -1.98
Fdft1-201ENSMUST00000054963 Mt3P28184 68 aa2.63□□□□□ -1.99
Fdft1-201ENSMUST00000054963 Gm4553A0A1B0GSA9 284 aa2.62□□□□□ -1.99
Fdft1-201ENSMUST00000054963 A030014E15RikA0A1Y7VJV2 120 aa2.62□□□□□ -1.99
Fdft1-201ENSMUST00000054963 Muc19Q6PZE0 7524 aa2.6□□□□□ -1.99
Fdft1-201ENSMUST00000054963 Gm45337A0A1B0GS71 263 aa2.57□□□□□ -2
Fdft1-201ENSMUST00000054963 Gm2431E9Q8S1 172 aa2.56□□□□□ -2
Fdft1-201ENSMUST00000054963 Gm40460A0A1B0GR10 244 aa2.47□□□□□ -2.01
Fdft1-201ENSMUST00000054963 Gm7579A0A1B0GRJ4 243 aa2.47□□□□□ -2.01
Fdft1-201ENSMUST00000054963 Krtap5-5Q2TA51 241 aa2.47□□□□□ -2.01
Fdft1-201ENSMUST00000054963 Krtap5-4Q62220 223 aa2.47□□□□□ -2.01
Fdft1-201ENSMUST00000054963 DstQ91ZU6 7393 aaKnown RBP2.46□□□□□ -2.02
Fdft1-201ENSMUST00000054963 Eppk1Q8R0W0 6548 aa2.4□□□□□ -2.03
Fdft1-201ENSMUST00000054963 A030003K21RikA0A1Y7VIM3 128 aa2.38□□□□□ -2.03
Fdft1-201ENSMUST00000054963 Gm11639A0A1D5RLM8 5808 aa2.36□□□□□ -2.03
Fdft1-201ENSMUST00000054963 1110025L11RikO09048 78 aa2.33□□□□□ -2.04
Fdft1-201ENSMUST00000054963 Krtap6-5Q925H3 78 aa2.33□□□□□ -2.04
Fdft1-201ENSMUST00000054963 Gm39115A0A1B0GSH7 232 aa2.31□□□□□ -2.04
Fdft1-201ENSMUST00000054963 NebE9Q1W3 7152 aa2.29□□□□□ -2.04
Fdft1-201ENSMUST00000054963 Gm6217A0A1Y7VJK9 128 aa2.28□□□□□ -2.04
Fdft1-201ENSMUST00000054963 AhnakE9Q616 5656 aaKnown RBP2.19□□□□□ -2.06
Fdft1-201ENSMUST00000054963 A0A286YCP9 139 aa2.13□□□□□ -2.07
Fdft1-201ENSMUST00000054963 Gpr98Q8VHN7 6298 aaKnown RBP2.11□□□□□ -2.07
Fdft1-201ENSMUST00000054963 Sprr2bO70554 98 aa2.09□□□□□ -2.08
Fdft1-201ENSMUST00000054963 Gm10229O08631 77 aa2.06□□□□□ -2.08
Fdft1-201ENSMUST00000054963 Gm45618A0A1B0GSA0 219 aa2.01□□□□□ -2.09
Fdft1-201ENSMUST00000054963 Gm11567Q9D141 195 aa1.99□□□□□ -2.09
Fdft1-201ENSMUST00000054963 Phgr1Q8K0G7 91 aa1.94□□□□□ -2.1
Fdft1-201ENSMUST00000054963 Krtap21-1Q925H4 128 aa1.92□□□□□ -2.1
Fdft1-201ENSMUST00000054963 Gm29735A0A1B0GT06 219 aa1.85□□□□□ -2.11
Fdft1-201ENSMUST00000054963 Krtap6-2O08884 159 aa1.73□□□□□ -2.13
Fdft1-201ENSMUST00000054963 Krtap5-1Q64507 230 aa1.23□□□□□ -2.21
Fdft1-201ENSMUST00000054963 Gm4559A4IF42 199 aa1.16□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 34.3 ms