RNA–Protein interactions for RNA: ENSMUST00000052462.12

Pdpk1-201, Transcript of 3-phosphoinositide-dependent protein kinase 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdpk1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1-201ENSMUST00000052462 Gm11595B1AQA7 289 aa5.31□□□□□ -1.56
Pdpk1-201ENSMUST00000052462 Krtap4-8B1AQA8 209 aa5.31□□□□□ -1.56
Pdpk1-201ENSMUST00000052462 Syne2Q6ZWQ0 6874 aaKnown RBP5.29□□□□□ -1.56
Pdpk1-201ENSMUST00000052462 Gm10272F7CZ33 110 aa5.28□□□□□ -1.56
Pdpk1-201ENSMUST00000052462 Mt4P47945 62 aa5.2□□□□□ -1.58
Pdpk1-201ENSMUST00000052462 Lce1bQ9D149 137 aa5.18□□□□□ -1.58
Pdpk1-201ENSMUST00000052462 Krtap4-9B1AQA9 244 aa5.18□□□□□ -1.58
Pdpk1-201ENSMUST00000052462 Krtap31-2Q8CAY5 177 aa5.12□□□□□ -1.59
Pdpk1-201ENSMUST00000052462 Gm11938Q9D3H4 131 aa5.12□□□□□ -1.59
Pdpk1-201ENSMUST00000052462 Sprr2gO70558 76 aa5.07□□□□□ -1.6
Pdpk1-201ENSMUST00000052462 Sprr2dO70555 85 aa5.05□□□□□ -1.6
Pdpk1-201ENSMUST00000052462 Krtap4-13Q9D7P3 165 aa4.97□□□□□ -1.61
Pdpk1-201ENSMUST00000052462 Lce3bQ9CQM7 98 aa4.96□□□□□ -1.62
Pdpk1-201ENSMUST00000052462 Fsip2A2ARZ3 6995 aa4.94□□□□□ -1.62
Pdpk1-201ENSMUST00000052462 2300003K06RikA2A4M0 262 aa4.94□□□□□ -1.62
Pdpk1-201ENSMUST00000052462 Lce1eQ9D139 143 aa4.92□□□□□ -1.62
Pdpk1-201ENSMUST00000052462 Syne1Q6ZWR6 8799 aa4.9□□□□□ -1.62
Pdpk1-201ENSMUST00000052462 Sprr2kO70562 68 aa4.9□□□□□ -1.62
Pdpk1-201ENSMUST00000052462 Krtap19-4Q925H7 84 aa4.84□□□□□ -1.63
Pdpk1-201ENSMUST00000052462 4933428G20RikQ9D3X4 101 aa4.84□□□□□ -1.63
Pdpk1-201ENSMUST00000052462 Lce1cQ9D1C5 147 aa4.8□□□□□ -1.64
Pdpk1-201ENSMUST00000052462 Krtap6-3A0A087WQL6 57 aa4.72□□□□□ -1.65
Pdpk1-201ENSMUST00000052462 Lce1kJ3QP15 125 aa4.69□□□□□ -1.66
Pdpk1-201ENSMUST00000052462 Gm9112A2AI92 75 aa4.67□□□□□ -1.66
Pdpk1-201ENSMUST00000052462 Sprr2iO70560 76 aa4.67□□□□□ -1.66
Pdpk1-201ENSMUST00000052462 Lce3cQ91V05 98 aa4.66□□□□□ -1.66
Pdpk1-201ENSMUST00000052462 Gm11559Q9D3H7 191 aa4.62□□□□□ -1.67
Pdpk1-201ENSMUST00000052462 Lce1fB9EJP6 147 aa4.6□□□□□ -1.67
Pdpk1-201ENSMUST00000052462 Gm10100J3QK64 120 aa4.6□□□□□ -1.67
Pdpk1-201ENSMUST00000052462 Lce3dE9Q8V1 98 aa4.59□□□□□ -1.67
Pdpk1-201ENSMUST00000052462 Lce3eF8VQJ0 98 aa4.59□□□□□ -1.67
Pdpk1-201ENSMUST00000052462 Lce3fQ6PAI4 98 aa4.59□□□□□ -1.67
Pdpk1-201ENSMUST00000052462 Mt1P02802 61 aaKnown RBP4.58□□□□□ -1.68
Pdpk1-201ENSMUST00000052462 Krtap5-2Q9D5Z7 189 aa4.58□□□□□ -1.68
Pdpk1-201ENSMUST00000052462 Krtap20-2E9Q0A8 60 aa4.56□□□□□ -1.68
Pdpk1-201ENSMUST00000052462 Krtap31-1Q9D644 177 aa4.55□□□□□ -1.68
Pdpk1-201ENSMUST00000052462 Gm11568A2A4M2 211 aa4.53□□□□□ -1.68
Pdpk1-201ENSMUST00000052462 Krtap9-1Q64526 186 aa4.53□□□□□ -1.68
Pdpk1-201ENSMUST00000052462 Gm45618A0A1B0GSA0 219 aa4.49□□□□□ -1.69
Pdpk1-201ENSMUST00000052462 Gm10142J3KMP7 120 aa4.49□□□□□ -1.69
Pdpk1-201ENSMUST00000052462 Gm2431E9Q8S1 172 aa4.47□□□□□ -1.69
Pdpk1-201ENSMUST00000052462 ObscnA2AAJ9 8891 aaKnown RBP4.46□□□□□ -1.7
Pdpk1-201ENSMUST00000052462 Gm11554B1AQB2 190 aa4.46□□□□□ -1.7
Pdpk1-201ENSMUST00000052462 Gm11567Q9D141 195 aa4.45□□□□□ -1.7
Pdpk1-201ENSMUST00000052462 Gm39115A0A1B0GSH7 232 aa4.42□□□□□ -1.7
Pdpk1-201ENSMUST00000052462 Lce3aQ497I5 98 aa4.39□□□□□ -1.71
Pdpk1-201ENSMUST00000052462 Sprr2hO70559 108 aa4.37□□□□□ -1.71
Pdpk1-201ENSMUST00000052462 Gm10153A0A1B0GRL1 320 aa4.31□□□□□ -1.72
Pdpk1-201ENSMUST00000052462 Gm29735A0A1B0GT06 219 aa4.28□□□□□ -1.72
Pdpk1-201ENSMUST00000052462 Gm4553A0A1B0GSA9 284 aa4.25□□□□□ -1.73
Pdpk1-201ENSMUST00000052462 Gm45337A0A1B0GS71 263 aa4.19□□□□□ -1.74
Pdpk1-201ENSMUST00000052462 Sprr2eO70556 76 aa4.15□□□□□ -1.75
Pdpk1-201ENSMUST00000052462 Mt3P28184 68 aa4.11□□□□□ -1.75
Pdpk1-201ENSMUST00000052462 Gm40460A0A1B0GR10 244 aa4.07□□□□□ -1.76
Pdpk1-201ENSMUST00000052462 Gm7579A0A1B0GRJ4 243 aa4.07□□□□□ -1.76
Pdpk1-201ENSMUST00000052462 Krtap5-5Q2TA51 241 aa4.07□□□□□ -1.76
Pdpk1-201ENSMUST00000052462 Krtap5-4Q62220 223 aa4.07□□□□□ -1.76
Pdpk1-201ENSMUST00000052462 Macf1Q9QXZ0 7354 aaKnown RBP4.01□□□□□ -1.77
Pdpk1-201ENSMUST00000052462 Hmcn1D3YXG0 5634 aa3.89□□□□□ -1.79
Pdpk1-201ENSMUST00000052462 Sprr2fO70557 76 aa3.85□□□□□ -1.79
Pdpk1-201ENSMUST00000052462 Kmt2dQ6PDK2 5588 aa3.79□□□□□ -1.8
Pdpk1-201ENSMUST00000052462 Gm10024A0A0A0MQA4 119 aa3.77□□□□□ -1.81
Pdpk1-201ENSMUST00000052462 Krtap4-16Q91W93 202 aa3.54□□□□□ -1.84
Pdpk1-201ENSMUST00000052462 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Pdpk1-201ENSMUST00000052462 DstQ91ZU6 7393 aaKnown RBP3.47□□□□□ -1.85
Pdpk1-201ENSMUST00000052462 1110025L11RikO09048 78 aa3.45□□□□□ -1.86
Pdpk1-201ENSMUST00000052462 Krtap6-5Q925H3 78 aa3.45□□□□□ -1.86
Pdpk1-201ENSMUST00000052462 Muc19Q6PZE0 7524 aa3.43□□□□□ -1.86
Pdpk1-201ENSMUST00000052462 Gm11639A0A1D5RLM8 5808 aa3.33□□□□□ -1.88
Pdpk1-201ENSMUST00000052462 Muc16A0A140LJ72 8478 aa3.31□□□□□ -1.88
Pdpk1-201ENSMUST00000052462 AhnakE9Q616 5656 aaKnown RBP3.21□□□□□ -1.89
Pdpk1-201ENSMUST00000052462 NebE9Q1W3 7152 aa3.1□□□□□ -1.91
Pdpk1-201ENSMUST00000052462 Gm10229O08631 77 aa3.06□□□□□ -1.92
Pdpk1-201ENSMUST00000052462 Sprr2bO70554 98 aa3.05□□□□□ -1.92
Pdpk1-201ENSMUST00000052462 Gpr98Q8VHN7 6298 aaKnown RBP3.03□□□□□ -1.92
Pdpk1-201ENSMUST00000052462 Krtap5-1Q64507 230 aa2.96□□□□□ -1.94
Pdpk1-201ENSMUST00000052462 Krtap21-1Q925H4 128 aa2.82□□□□□ -1.96
Pdpk1-201ENSMUST00000052462 Gm4559A4IF42 199 aa2.79□□□□□ -1.96
Pdpk1-201ENSMUST00000052462 Krtap6-2O08884 159 aa2.63□□□□□ -1.99
Pdpk1-201ENSMUST00000052462 Phgr1Q8K0G7 91 aa2.59□□□□□ -1.99
Retrieved 80 of 22,080 RNA–protein pairs in 6 ms