RNA–Protein interactions for RNA: ENSMUST00000052366.4

Pcdhb1-201, Transcript of Protocadherin beta 1, mousemouse

APPRIS P1 BASIC

Gene Pcdhb1, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1-201ENSMUST00000052366 Lce3eF8VQJ0 98 aa3.85□□□□□ -1.79
Pcdhb1-201ENSMUST00000052366 Lce3fQ6PAI4 98 aa3.85□□□□□ -1.79
Pcdhb1-201ENSMUST00000052366 Gm11555B1AQ89 175 aa3.85□□□□□ -1.79
Pcdhb1-201ENSMUST00000052366 Fsip2A2ARZ3 6995 aa3.83□□□□□ -1.8
Pcdhb1-201ENSMUST00000052366 A0A1Y7VLE6 161 aa3.83□□□□□ -1.8
Pcdhb1-201ENSMUST00000052366 Mt4P47945 62 aa3.81□□□□□ -1.8
Pcdhb1-201ENSMUST00000052366 Sprr2hO70559 108 aa3.81□□□□□ -1.8
Pcdhb1-201ENSMUST00000052366 Lce1gQ9D195 139 aa3.81□□□□□ -1.8
Pcdhb1-201ENSMUST00000052366 Krtap28-13A0A087WQP5 138 aa3.77□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Sprr2iO70560 76 aa3.77□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Gm11564A2A4L9 201 aa3.76□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Gm11595B1AQA7 289 aa3.76□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Krtap4-8B1AQA8 209 aa3.76□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Krtap4-2B1AQ85 167 aa3.76□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Gm11596B1AQB0 205 aa3.75□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Gm7544A0A1Y7VJ58 118 aa3.74□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 ObscnA2AAJ9 8891 aaKnown RBP3.74□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 A030005L19RikA0A1Y7VIU2 113 aa3.72□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Syne2Q6ZWQ0 6874 aaKnown RBP3.72□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Krtap4-9B1AQA9 244 aa3.71□□□□□ -1.81
Pcdhb1-201ENSMUST00000052366 Lce3aQ497I5 98 aa3.7□□□□□ -1.82
Pcdhb1-201ENSMUST00000052366 Sprr2eO70556 76 aa3.69□□□□□ -1.82
Pcdhb1-201ENSMUST00000052366 Lce1bQ9D149 137 aa3.68□□□□□ -1.82
Pcdhb1-201ENSMUST00000052366 Krtap31-2Q8CAY5 177 aa3.67□□□□□ -1.82
Pcdhb1-201ENSMUST00000052366 A030005K14RikA0A1Y7VNY1 122 aa3.65□□□□□ -1.82
Pcdhb1-201ENSMUST00000052366 2300003K06RikA2A4M0 262 aa3.65□□□□□ -1.83
Pcdhb1-201ENSMUST00000052366 Krtap31-1Q9D644 177 aa3.6□□□□□ -1.83
Pcdhb1-201ENSMUST00000052366 Sprr2fO70557 76 aa3.6□□□□□ -1.83
Pcdhb1-201ENSMUST00000052366 Lce1lQ9D1G7 135 aa3.6□□□□□ -1.83
Pcdhb1-201ENSMUST00000052366 Krtap4-13Q9D7P3 165 aa3.6□□□□□ -1.83
Pcdhb1-201ENSMUST00000052366 Sprr2kO70562 68 aa3.59□□□□□ -1.83
Pcdhb1-201ENSMUST00000052366 Lce1kJ3QP15 125 aa3.58□□□□□ -1.84
Pcdhb1-201ENSMUST00000052366 Mt1P02802 61 aaKnown RBP3.57□□□□□ -1.84
Pcdhb1-201ENSMUST00000052366 Krtap4-16Q91W93 202 aa3.45□□□□□ -1.86
Pcdhb1-201ENSMUST00000052366 Gm11568A2A4M2 211 aa3.39□□□□□ -1.87
Pcdhb1-201ENSMUST00000052366 Krtap9-1Q64526 186 aa3.39□□□□□ -1.87
Pcdhb1-201ENSMUST00000052366 Krtap20-2E9Q0A8 60 aa3.34□□□□□ -1.87
Pcdhb1-201ENSMUST00000052366 Gm10024A0A0A0MQA4 119 aa3.27□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 A0A1Y7VJ07 166 aa3.27□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 A0A286YCP9 139 aa3.27□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 Macf1Q9QXZ0 7354 aaKnown RBP3.26□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 A030003K21RikA0A1Y7VIM3 128 aa3.24□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 Gm6217A0A1Y7VJK9 128 aa3.24□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 Krtap5-2Q9D5Z7 189 aa3.22□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 Muc16A0A140LJ72 8478 aa3.22□□□□□ -1.89
Pcdhb1-201ENSMUST00000052366 Gm10153A0A1B0GRL1 320 aa3.15□□□□□ -1.9
Pcdhb1-201ENSMUST00000052366 Mt3P28184 68 aa3.15□□□□□ -1.91
Pcdhb1-201ENSMUST00000052366 Krtap6-3A0A087WQL6 57 aa3.12□□□□□ -1.91
Pcdhb1-201ENSMUST00000052366 A030014E15RikA0A1Y7VJV2 120 aa3.08□□□□□ -1.92
Pcdhb1-201ENSMUST00000052366 Hmcn1D3YXG0 5634 aa3.08□□□□□ -1.92
Pcdhb1-201ENSMUST00000052366 Kmt2dQ6PDK2 5588 aa3.06□□□□□ -1.92
Pcdhb1-201ENSMUST00000052366 Gm11554B1AQB2 190 aa2.93□□□□□ -1.94
Pcdhb1-201ENSMUST00000052366 Gm4553A0A1B0GSA9 284 aa2.92□□□□□ -1.94
Pcdhb1-201ENSMUST00000052366 Gm45337A0A1B0GS71 263 aa2.92□□□□□ -1.94
Pcdhb1-201ENSMUST00000052366 Gm11559Q9D3H7 191 aa2.91□□□□□ -1.94
Pcdhb1-201ENSMUST00000052366 Gm2431E9Q8S1 172 aa2.86□□□□□ -1.95
Pcdhb1-201ENSMUST00000052366 Muc19Q6PZE0 7524 aa2.83□□□□□ -1.96
Pcdhb1-201ENSMUST00000052366 Gm40460A0A1B0GR10 244 aa2.82□□□□□ -1.96
Pcdhb1-201ENSMUST00000052366 Gm7579A0A1B0GRJ4 243 aa2.82□□□□□ -1.96
Pcdhb1-201ENSMUST00000052366 Krtap5-5Q2TA51 241 aa2.82□□□□□ -1.96
Pcdhb1-201ENSMUST00000052366 Krtap5-4Q62220 223 aa2.82□□□□□ -1.96
Pcdhb1-201ENSMUST00000052366 1110025L11RikO09048 78 aa2.76□□□□□ -1.97
Pcdhb1-201ENSMUST00000052366 Krtap6-5Q925H3 78 aa2.76□□□□□ -1.97
Pcdhb1-201ENSMUST00000052366 Eppk1Q8R0W0 6548 aa2.75□□□□□ -1.97
Pcdhb1-201ENSMUST00000052366 DstQ91ZU6 7393 aaKnown RBP2.67□□□□□ -1.98
Pcdhb1-201ENSMUST00000052366 Gm11639A0A1D5RLM8 5808 aa2.61□□□□□ -1.99
Pcdhb1-201ENSMUST00000052366 Gm39115A0A1B0GSH7 232 aa2.56□□□□□ -2
Pcdhb1-201ENSMUST00000052366 Gpr98Q8VHN7 6298 aaKnown RBP2.55□□□□□ -2
Pcdhb1-201ENSMUST00000052366 Sprr2bO70554 98 aa2.51□□□□□ -2.01
Pcdhb1-201ENSMUST00000052366 AhnakE9Q616 5656 aaKnown RBP2.48□□□□□ -2.01
Pcdhb1-201ENSMUST00000052366 Gm10229O08631 77 aa2.44□□□□□ -2.02
Pcdhb1-201ENSMUST00000052366 NebE9Q1W3 7152 aa2.38□□□□□ -2.03
Pcdhb1-201ENSMUST00000052366 Gm11567Q9D141 195 aa2.29□□□□□ -2.04
Pcdhb1-201ENSMUST00000052366 Krtap21-1Q925H4 128 aa2.26□□□□□ -2.05
Pcdhb1-201ENSMUST00000052366 Phgr1Q8K0G7 91 aa2.25□□□□□ -2.05
Pcdhb1-201ENSMUST00000052366 Gm45618A0A1B0GSA0 219 aa2.23□□□□□ -2.05
Pcdhb1-201ENSMUST00000052366 Gm29735A0A1B0GT06 219 aa2.14□□□□□ -2.07
Pcdhb1-201ENSMUST00000052366 Krtap6-2O08884 159 aa2.04□□□□□ -2.08
Pcdhb1-201ENSMUST00000052366 Krtap5-1Q64507 230 aa1.56□□□□□ -2.16
Pcdhb1-201ENSMUST00000052366 Gm4559A4IF42 199 aa1.5□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 21.4 ms