RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Sprr2gO70558 76 aa2.8□□□□□ -1.96
Ccdc60-201ENSMUST00000050178 Lce1eQ9D139 143 aa2.8□□□□□ -1.96
Ccdc60-201ENSMUST00000050178 Gm11938Q9D3H4 131 aa2.8□□□□□ -1.96
Ccdc60-201ENSMUST00000050178 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Ccdc60-201ENSMUST00000050178 Krtap5-2Q9D5Z7 189 aa2.78□□□□□ -1.96
Ccdc60-201ENSMUST00000050178 Lce1dQ9D731 133 aa2.78□□□□□ -1.96
Ccdc60-201ENSMUST00000050178 Krtap20-2E9Q0A8 60 aa2.77□□□□□ -1.97
Ccdc60-201ENSMUST00000050178 Lce1a1Q9CQH5 143 aa2.73□□□□□ -1.97
Ccdc60-201ENSMUST00000050178 Gm11559Q9D3H7 191 aa2.7□□□□□ -1.98
Ccdc60-201ENSMUST00000050178 Gm45337A0A1B0GS71 263 aa2.67□□□□□ -1.98
Ccdc60-201ENSMUST00000050178 Gm10272F7CZ33 110 aa2.67□□□□□ -1.98
Ccdc60-201ENSMUST00000050178 Gm4553A0A1B0GSA9 284 aa2.66□□□□□ -1.98
Ccdc60-201ENSMUST00000050178 Krtap4-9B1AQA9 244 aa2.66□□□□□ -1.98
Ccdc60-201ENSMUST00000050178 Mdn1A2ANY6 5589 aaKnown RBP2.63□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Gm40460A0A1B0GR10 244 aa2.63□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Gm7579A0A1B0GRJ4 243 aa2.63□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Krtap5-5Q2TA51 241 aa2.63□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Krtap5-4Q62220 223 aa2.63□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 A030003K21RikA0A1Y7VIM3 128 aa2.62□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Gm6217A0A1Y7VJK9 128 aa2.62□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Krtap19-4Q925H7 84 aa2.62□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 A0A286YCP9 139 aa2.61□□□□□ -1.99
Ccdc60-201ENSMUST00000050178 Lce1cQ9D1C5 147 aa2.57□□□□□ -2
Ccdc60-201ENSMUST00000050178 4933428G20RikQ9D3X4 101 aa2.55□□□□□ -2
Ccdc60-201ENSMUST00000050178 Gm39115A0A1B0GSH7 232 aa2.55□□□□□ -2
Ccdc60-201ENSMUST00000050178 2300003K06RikA2A4M0 262 aa2.52□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Mt4P47945 62 aa2.51□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Gm10153A0A1B0GRL1 320 aa2.5□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Lce1lQ9D1G7 135 aa2.5□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Gm11639A0A1D5RLM8 5808 aa2.5□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Krtap4-13Q9D7P3 165 aa2.49□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Lce1fB9EJP6 147 aa2.47□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Syne1Q6ZWR6 8799 aa2.47□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 Gpr98Q8VHN7 6298 aaKnown RBP2.46□□□□□ -2.01
Ccdc60-201ENSMUST00000050178 A0A1Y7VJ07 166 aa2.45□□□□□ -2.02
Ccdc60-201ENSMUST00000050178 Gm2431E9Q8S1 172 aa2.44□□□□□ -2.02
Ccdc60-201ENSMUST00000050178 Gm45618A0A1B0GSA0 219 aa2.42□□□□□ -2.02
Ccdc60-201ENSMUST00000050178 Lce3bQ9CQM7 98 aa2.42□□□□□ -2.02
Ccdc60-201ENSMUST00000050178 Sprr2hO70559 108 aa2.41□□□□□ -2.02
Ccdc60-201ENSMUST00000050178 Mt1P02802 61 aaKnown RBP2.4□□□□□ -2.02
Ccdc60-201ENSMUST00000050178 Gm10100J3QK64 120 aa2.4□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 Gm11568A2A4M2 211 aa2.38□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 Krtap9-1Q64526 186 aa2.38□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 A030014E15RikA0A1Y7VJV2 120 aa2.35□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 Sprr2eO70556 76 aa2.35□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 Muc16A0A140LJ72 8478 aa2.35□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 Sprr2iO70560 76 aa2.34□□□□□ -2.03
Ccdc60-201ENSMUST00000050178 Gm10142J3KMP7 120 aa2.33□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Sprr2kO70562 68 aa2.32□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Lce3dE9Q8V1 98 aa2.29□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Lce1kJ3QP15 125 aa2.29□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Kmt2dQ6PDK2 5588 aa2.28□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Lce3eF8VQJ0 98 aa2.28□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Lce3fQ6PAI4 98 aa2.28□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Lce3cQ91V05 98 aa2.28□□□□□ -2.04
Ccdc60-201ENSMUST00000050178 Fsip2A2ARZ3 6995 aa2.26□□□□□ -2.05
Ccdc60-201ENSMUST00000050178 ObscnA2AAJ9 8891 aaKnown RBP2.25□□□□□ -2.05
Ccdc60-201ENSMUST00000050178 Lce3aQ497I5 98 aa2.18□□□□□ -2.06
Ccdc60-201ENSMUST00000050178 AhnakE9Q616 5656 aaKnown RBP2.18□□□□□ -2.06
Ccdc60-201ENSMUST00000050178 Sprr2fO70557 76 aa2.17□□□□□ -2.06
Ccdc60-201ENSMUST00000050178 Hmcn1D3YXG0 5634 aa2.13□□□□□ -2.07
Ccdc60-201ENSMUST00000050178 Mt3P28184 68 aa2.07□□□□□ -2.08
Ccdc60-201ENSMUST00000050178 Krtap4-16Q91W93 202 aa2.05□□□□□ -2.08
Ccdc60-201ENSMUST00000050178 Gm29735A0A1B0GT06 219 aa1.98□□□□□ -2.09
Ccdc60-201ENSMUST00000050178 Macf1Q9QXZ0 7354 aaKnown RBP1.97□□□□□ -2.09
Ccdc60-201ENSMUST00000050178 Gm11554B1AQB2 190 aa1.96□□□□□ -2.1
Ccdc60-201ENSMUST00000050178 Gm10024A0A0A0MQA4 119 aa1.93□□□□□ -2.1
Ccdc60-201ENSMUST00000050178 Muc19Q6PZE0 7524 aa1.86□□□□□ -2.11
Ccdc60-201ENSMUST00000050178 1110025L11RikO09048 78 aa1.81□□□□□ -2.12
Ccdc60-201ENSMUST00000050178 Krtap6-5Q925H3 78 aa1.81□□□□□ -2.12
Ccdc60-201ENSMUST00000050178 DstQ91ZU6 7393 aaKnown RBP1.77□□□□□ -2.13
Ccdc60-201ENSMUST00000050178 NebE9Q1W3 7152 aa1.74□□□□□ -2.13
Ccdc60-201ENSMUST00000050178 Gm11567Q9D141 195 aa1.71□□□□□ -2.13
Ccdc60-201ENSMUST00000050178 Sprr2bO70554 98 aa1.67□□□□□ -2.14
Ccdc60-201ENSMUST00000050178 Gm10229O08631 77 aa1.58□□□□□ -2.16
Ccdc60-201ENSMUST00000050178 Krtap21-1Q925H4 128 aa1.53□□□□□ -2.17
Ccdc60-201ENSMUST00000050178 Phgr1Q8K0G7 91 aa1.41□□□□□ -2.18
Ccdc60-201ENSMUST00000050178 Krtap6-2O08884 159 aa1.34□□□□□ -2.2
Ccdc60-201ENSMUST00000050178 Krtap5-1Q64507 230 aa1.26□□□□□ -2.21
Ccdc60-201ENSMUST00000050178 Gm4559A4IF42 199 aa1.23□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 50.4 ms