RNA–Protein interactions for RNA: ENSMUST00000047793.5

Hoxd1-201, Transcript of Homeobox protein Hox-D1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd1-201ENSMUST00000047793 Lce1dQ9D731 133 aa7.33□□□□□ -1.24
Hoxd1-201ENSMUST00000047793 Krtap4-7Q9D732 168 aa7.29□□□□□ -1.24
Hoxd1-201ENSMUST00000047793 Gm11938Q9D3H4 131 aa7.21□□□□□ -1.25
Hoxd1-201ENSMUST00000047793 Lce1eQ9D139 143 aa7.1□□□□□ -1.27
Hoxd1-201ENSMUST00000047793 Lce1a1Q9CQH5 143 aa7.04□□□□□ -1.28
Hoxd1-201ENSMUST00000047793 Gm10272F7CZ33 110 aa7.02□□□□□ -1.29
Hoxd1-201ENSMUST00000047793 Krtap20-2E9Q0A8 60 aa6.96□□□□□ -1.29
Hoxd1-201ENSMUST00000047793 Krtap19-4Q925H7 84 aa6.81□□□□□ -1.32
Hoxd1-201ENSMUST00000047793 A0A1Y7VJH8 109 aa6.66□□□□□ -1.34
Hoxd1-201ENSMUST00000047793 Lce1cQ9D1C5 147 aa6.66□□□□□ -1.34
Hoxd1-201ENSMUST00000047793 Sprr2iO70560 76 aa6.6□□□□□ -1.35
Hoxd1-201ENSMUST00000047793 Gm10100J3QK64 120 aa6.58□□□□□ -1.36
Hoxd1-201ENSMUST00000047793 Lce3bQ9CQM7 98 aa6.57□□□□□ -1.36
Hoxd1-201ENSMUST00000047793 Gm10142J3KMP7 120 aa6.49□□□□□ -1.37
Hoxd1-201ENSMUST00000047793 Krtap5-2Q9D5Z7 189 aa6.48□□□□□ -1.37
Hoxd1-201ENSMUST00000047793 Eppk1Q8R0W0 6548 aa6.47□□□□□ -1.37
Hoxd1-201ENSMUST00000047793 Syne1Q6ZWR6 8799 aa6.44□□□□□ -1.38
Hoxd1-201ENSMUST00000047793 Lce1kJ3QP15 125 aa6.43□□□□□ -1.38
Hoxd1-201ENSMUST00000047793 Lce1fB9EJP6 147 aa6.41□□□□□ -1.38
Hoxd1-201ENSMUST00000047793 Gm11559Q9D3H7 191 aa6.41□□□□□ -1.38
Hoxd1-201ENSMUST00000047793 Sprr2eO70556 76 aa6.36□□□□□ -1.39
Hoxd1-201ENSMUST00000047793 Sprr2hO70559 108 aa6.36□□□□□ -1.39
Hoxd1-201ENSMUST00000047793 Macf1Q9QXZ0 7354 aaKnown RBP6.35□□□□□ -1.39
Hoxd1-201ENSMUST00000047793 Gm11554B1AQB2 190 aa6.34□□□□□ -1.39
Hoxd1-201ENSMUST00000047793 Krtap28-10A0A1Y7VP58 119 aa6.33□□□□□ -1.4
Hoxd1-201ENSMUST00000047793 A030005L19RikA0A1Y7VIU2 113 aa6.31□□□□□ -1.4
Hoxd1-201ENSMUST00000047793 Lce3cQ91V05 98 aa6.26□□□□□ -1.41
Hoxd1-201ENSMUST00000047793 Sprr2fO70557 76 aa6.25□□□□□ -1.41
Hoxd1-201ENSMUST00000047793 Lce3dE9Q8V1 98 aa6.24□□□□□ -1.41
Hoxd1-201ENSMUST00000047793 Gm11568A2A4M2 211 aa6.23□□□□□ -1.41
Hoxd1-201ENSMUST00000047793 Krtap9-1Q64526 186 aa6.23□□□□□ -1.41
Hoxd1-201ENSMUST00000047793 Kmt2dQ6PDK2 5588 aa6.21□□□□□ -1.42
Hoxd1-201ENSMUST00000047793 Gm4553A0A1B0GSA9 284 aa6.21□□□□□ -1.42
Hoxd1-201ENSMUST00000047793 Gm11639A0A1D5RLM8 5808 aa6.18□□□□□ -1.42
Hoxd1-201ENSMUST00000047793 A0A1Y7VLE6 161 aa6.13□□□□□ -1.43
Hoxd1-201ENSMUST00000047793 Lce3eF8VQJ0 98 aa6.13□□□□□ -1.43
Hoxd1-201ENSMUST00000047793 Lce3fQ6PAI4 98 aa6.13□□□□□ -1.43
Hoxd1-201ENSMUST00000047793 Gm2431E9Q8S1 172 aa6.05□□□□□ -1.44
Hoxd1-201ENSMUST00000047793 Lce3aQ497I5 98 aa6.03□□□□□ -1.44
Hoxd1-201ENSMUST00000047793 Krtap28-13A0A087WQP5 138 aa6.02□□□□□ -1.44
Hoxd1-201ENSMUST00000047793 Muc19Q6PZE0 7524 aa6.01□□□□□ -1.45
Hoxd1-201ENSMUST00000047793 Mt1P02802 61 aaKnown RBP6□□□□□ -1.45
Hoxd1-201ENSMUST00000047793 Gm45337A0A1B0GS71 263 aa5.92□□□□□ -1.46
Hoxd1-201ENSMUST00000047793 Krtap31-1Q9D644 177 aa5.9□□□□□ -1.46
Hoxd1-201ENSMUST00000047793 ObscnA2AAJ9 8891 aaKnown RBP5.87□□□□□ -1.47
Hoxd1-201ENSMUST00000047793 Gpr98Q8VHN7 6298 aaKnown RBP5.87□□□□□ -1.47
Hoxd1-201ENSMUST00000047793 Hmcn1D3YXG0 5634 aa5.86□□□□□ -1.47
Hoxd1-201ENSMUST00000047793 A030005K14RikA0A1Y7VNY1 122 aa5.83□□□□□ -1.48
Hoxd1-201ENSMUST00000047793 Gm10153A0A1B0GRL1 320 aa5.76□□□□□ -1.49
Hoxd1-201ENSMUST00000047793 Gm7544A0A1Y7VJ58 118 aa5.71□□□□□ -1.5
Hoxd1-201ENSMUST00000047793 Gm40460A0A1B0GR10 244 aa5.69□□□□□ -1.5
Hoxd1-201ENSMUST00000047793 Gm7579A0A1B0GRJ4 243 aa5.69□□□□□ -1.5
Hoxd1-201ENSMUST00000047793 Krtap5-5Q2TA51 241 aa5.69□□□□□ -1.5
Hoxd1-201ENSMUST00000047793 Krtap5-4Q62220 223 aa5.69□□□□□ -1.5
Hoxd1-201ENSMUST00000047793 DstQ91ZU6 7393 aaKnown RBP5.66□□□□□ -1.5
Hoxd1-201ENSMUST00000047793 Gm39115A0A1B0GSH7 232 aa5.64□□□□□ -1.51
Hoxd1-201ENSMUST00000047793 NebE9Q1W3 7152 aa5.51□□□□□ -1.53
Hoxd1-201ENSMUST00000047793 Krtap4-16Q91W93 202 aa5.46□□□□□ -1.54
Hoxd1-201ENSMUST00000047793 Mt3P28184 68 aa5.41□□□□□ -1.54
Hoxd1-201ENSMUST00000047793 Gm45618A0A1B0GSA0 219 aa5.28□□□□□ -1.56
Hoxd1-201ENSMUST00000047793 Gm10024A0A0A0MQA4 119 aa5.25□□□□□ -1.57
Hoxd1-201ENSMUST00000047793 A0A1Y7VJ07 166 aa5.25□□□□□ -1.57
Hoxd1-201ENSMUST00000047793 AhnakE9Q616 5656 aaKnown RBP5.23□□□□□ -1.57
Hoxd1-201ENSMUST00000047793 A030003K21RikA0A1Y7VIM3 128 aa5.09□□□□□ -1.6
Hoxd1-201ENSMUST00000047793 A030014E15RikA0A1Y7VJV2 120 aa4.98□□□□□ -1.61
Hoxd1-201ENSMUST00000047793 Gm6217A0A1Y7VJK9 128 aa4.81□□□□□ -1.64
Hoxd1-201ENSMUST00000047793 A0A286YCP9 139 aa4.78□□□□□ -1.64
Hoxd1-201ENSMUST00000047793 1110025L11RikO09048 78 aa4.54□□□□□ -1.68
Hoxd1-201ENSMUST00000047793 Krtap6-5Q925H3 78 aa4.54□□□□□ -1.68
Hoxd1-201ENSMUST00000047793 Sprr2bO70554 98 aa4.43□□□□□ -1.7
Hoxd1-201ENSMUST00000047793 Krtap31-2Q8CAY5 177 aa4.36□□□□□ -1.71
Hoxd1-201ENSMUST00000047793 Muc16A0A140LJ72 8478 aa4.34□□□□□ -1.71
Hoxd1-201ENSMUST00000047793 Gm29735A0A1B0GT06 219 aa4.17□□□□□ -1.74
Hoxd1-201ENSMUST00000047793 Gm10229O08631 77 aa4.03□□□□□ -1.76
Hoxd1-201ENSMUST00000047793 Gm11567Q9D141 195 aa3.95□□□□□ -1.78
Hoxd1-201ENSMUST00000047793 Phgr1Q8K0G7 91 aa3.72□□□□□ -1.81
Hoxd1-201ENSMUST00000047793 Krtap21-1Q925H4 128 aa3.71□□□□□ -1.82
Hoxd1-201ENSMUST00000047793 Krtap6-2O08884 159 aa3.43□□□□□ -1.86
Hoxd1-201ENSMUST00000047793 Krtap5-1Q64507 230 aa3.3□□□□□ -1.88
Hoxd1-201ENSMUST00000047793 Gm4559A4IF42 199 aa2.43□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 9.6 ms