RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Lce1bQ9D149 137 aa4.82□□□□□ -1.64
Clcnka-201ENSMUST00000042617 Lce1cQ9D1C5 147 aa4.81□□□□□ -1.64
Clcnka-201ENSMUST00000042617 Lce1lQ9D1G7 135 aa4.8□□□□□ -1.64
Clcnka-201ENSMUST00000042617 Krtap31-2Q8CAY5 177 aa4.8□□□□□ -1.64
Clcnka-201ENSMUST00000042617 Sprr2kO70562 68 aa4.79□□□□□ -1.64
Clcnka-201ENSMUST00000042617 Sprr2iO70560 76 aa4.76□□□□□ -1.65
Clcnka-201ENSMUST00000042617 2300003K06RikA2A4M0 262 aa4.75□□□□□ -1.65
Clcnka-201ENSMUST00000042617 Gm38119A0A0A6YX29 146 aa4.74□□□□□ -1.65
Clcnka-201ENSMUST00000042617 Gm10100J3QK64 120 aa4.71□□□□□ -1.66
Clcnka-201ENSMUST00000042617 Krtap19-4Q925H7 84 aa4.7□□□□□ -1.66
Clcnka-201ENSMUST00000042617 Krtap4-7Q9D732 168 aa4.7□□□□□ -1.66
Clcnka-201ENSMUST00000042617 Lce1fB9EJP6 147 aa4.65□□□□□ -1.67
Clcnka-201ENSMUST00000042617 Lce1a1Q9CQH5 143 aa4.65□□□□□ -1.67
Clcnka-201ENSMUST00000042617 Gm10142J3KMP7 120 aa4.64□□□□□ -1.67
Clcnka-201ENSMUST00000042617 Lce3bQ9CQM7 98 aa4.63□□□□□ -1.67
Clcnka-201ENSMUST00000042617 Syne1Q6ZWR6 8799 aa4.55□□□□□ -1.68
Clcnka-201ENSMUST00000042617 Krtap20-2E9Q0A8 60 aa4.54□□□□□ -1.68
Clcnka-201ENSMUST00000042617 Sprr2eO70556 76 aa4.51□□□□□ -1.69
Clcnka-201ENSMUST00000042617 Sprr2fO70557 76 aa4.51□□□□□ -1.69
Clcnka-201ENSMUST00000042617 Sprr2hO70559 108 aa4.51□□□□□ -1.69
Clcnka-201ENSMUST00000042617 Lce3cQ91V05 98 aa4.48□□□□□ -1.69
Clcnka-201ENSMUST00000042617 Lce3dE9Q8V1 98 aa4.47□□□□□ -1.69
Clcnka-201ENSMUST00000042617 Lce3eF8VQJ0 98 aa4.38□□□□□ -1.71
Clcnka-201ENSMUST00000042617 Lce3fQ6PAI4 98 aa4.38□□□□□ -1.71
Clcnka-201ENSMUST00000042617 Eppk1Q8R0W0 6548 aa4.34□□□□□ -1.71
Clcnka-201ENSMUST00000042617 A0A1Y7VJH8 109 aa4.33□□□□□ -1.72
Clcnka-201ENSMUST00000042617 Lce3aQ497I5 98 aa4.32□□□□□ -1.72
Clcnka-201ENSMUST00000042617 Lce1kJ3QP15 125 aa4.26□□□□□ -1.73
Clcnka-201ENSMUST00000042617 Krtap5-2Q9D5Z7 189 aa4.17□□□□□ -1.74
Clcnka-201ENSMUST00000042617 Gm11559Q9D3H7 191 aa4.17□□□□□ -1.74
Clcnka-201ENSMUST00000042617 ObscnA2AAJ9 8891 aaKnown RBP4.16□□□□□ -1.74
Clcnka-201ENSMUST00000042617 A030005L19RikA0A1Y7VIU2 113 aa4.15□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Gm11568A2A4M2 211 aa4.13□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Krtap9-1Q64526 186 aa4.13□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Gm11554B1AQB2 190 aa4.12□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Krtap4-16Q91W93 202 aa4.12□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Gm11639A0A1D5RLM8 5808 aa4.11□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Macf1Q9QXZ0 7354 aaKnown RBP4.1□□□□□ -1.75
Clcnka-201ENSMUST00000042617 Kmt2dQ6PDK2 5588 aa4.03□□□□□ -1.76
Clcnka-201ENSMUST00000042617 Gm4553A0A1B0GSA9 284 aa4.02□□□□□ -1.77
Clcnka-201ENSMUST00000042617 Mt1P02802 61 aaKnown RBP3.99□□□□□ -1.77
Clcnka-201ENSMUST00000042617 Muc19Q6PZE0 7524 aa3.94□□□□□ -1.78
Clcnka-201ENSMUST00000042617 Gpr98Q8VHN7 6298 aaKnown RBP3.92□□□□□ -1.78
Clcnka-201ENSMUST00000042617 Gm2431E9Q8S1 172 aa3.92□□□□□ -1.78
Clcnka-201ENSMUST00000042617 Gm10153A0A1B0GRL1 320 aa3.84□□□□□ -1.8
Clcnka-201ENSMUST00000042617 Hmcn1D3YXG0 5634 aa3.82□□□□□ -1.8
Clcnka-201ENSMUST00000042617 Gm45337A0A1B0GS71 263 aa3.82□□□□□ -1.8
Clcnka-201ENSMUST00000042617 Muc16A0A140LJ72 8478 aa3.76□□□□□ -1.81
Clcnka-201ENSMUST00000042617 Gm10024A0A0A0MQA4 119 aa3.7□□□□□ -1.82
Clcnka-201ENSMUST00000042617 DstQ91ZU6 7393 aaKnown RBP3.68□□□□□ -1.82
Clcnka-201ENSMUST00000042617 Gm40460A0A1B0GR10 244 aa3.66□□□□□ -1.82
Clcnka-201ENSMUST00000042617 Gm7579A0A1B0GRJ4 243 aa3.66□□□□□ -1.82
Clcnka-201ENSMUST00000042617 Gm39115A0A1B0GSH7 232 aa3.66□□□□□ -1.82
Clcnka-201ENSMUST00000042617 Krtap5-5Q2TA51 241 aa3.66□□□□□ -1.82
Clcnka-201ENSMUST00000042617 Krtap5-4Q62220 223 aa3.66□□□□□ -1.82
Clcnka-201ENSMUST00000042617 NebE9Q1W3 7152 aa3.62□□□□□ -1.83
Clcnka-201ENSMUST00000042617 A0A1Y7VLE6 161 aa3.57□□□□□ -1.84
Clcnka-201ENSMUST00000042617 Mt3P28184 68 aa3.57□□□□□ -1.84
Clcnka-201ENSMUST00000042617 Gm45618A0A1B0GSA0 219 aa3.46□□□□□ -1.85
Clcnka-201ENSMUST00000042617 AhnakE9Q616 5656 aaKnown RBP3.37□□□□□ -1.87
Clcnka-201ENSMUST00000042617 1110025L11RikO09048 78 aa3.03□□□□□ -1.92
Clcnka-201ENSMUST00000042617 Krtap6-5Q925H3 78 aa3.03□□□□□ -1.92
Clcnka-201ENSMUST00000042617 Sprr2bO70554 98 aa2.99□□□□□ -1.93
Clcnka-201ENSMUST00000042617 A0A1Y7VJ07 166 aa2.95□□□□□ -1.94
Clcnka-201ENSMUST00000042617 Krtap28-10A0A1Y7VP58 119 aa2.82□□□□□ -1.96
Clcnka-201ENSMUST00000042617 Gm11567Q9D141 195 aa2.71□□□□□ -1.98
Clcnka-201ENSMUST00000042617 Gm29735A0A1B0GT06 219 aa2.7□□□□□ -1.98
Clcnka-201ENSMUST00000042617 Gm10229O08631 77 aa2.68□□□□□ -1.98
Clcnka-201ENSMUST00000042617 Gm7544A0A1Y7VJ58 118 aa2.67□□□□□ -1.98
Clcnka-201ENSMUST00000042617 Phgr1Q8K0G7 91 aa2.63□□□□□ -1.99
Clcnka-201ENSMUST00000042617 Krtap28-13A0A087WQP5 138 aa2.62□□□□□ -1.99
Clcnka-201ENSMUST00000042617 A030005K14RikA0A1Y7VNY1 122 aa2.6□□□□□ -1.99
Clcnka-201ENSMUST00000042617 A0A286YCP9 139 aa2.59□□□□□ -2
Clcnka-201ENSMUST00000042617 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Clcnka-201ENSMUST00000042617 A030003K21RikA0A1Y7VIM3 128 aa2.35□□□□□ -2.03
Clcnka-201ENSMUST00000042617 Gm6217A0A1Y7VJK9 128 aa2.29□□□□□ -2.04
Clcnka-201ENSMUST00000042617 Krtap6-2O08884 159 aa2.28□□□□□ -2.04
Clcnka-201ENSMUST00000042617 Krtap5-1Q64507 230 aa2.19□□□□□ -2.06
Clcnka-201ENSMUST00000042617 A030014E15RikA0A1Y7VJV2 120 aa2.07□□□□□ -2.08
Clcnka-201ENSMUST00000042617 Gm4559A4IF42 199 aa1.58□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 6.8 ms