RNA–Protein interactions for RNA: ENSMUST00000041342.11

Cacna1b-201, Transcript of Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cacna1b, Length 6,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1b-201ENSMUST00000041342 Krtap4-1Q3UUY3 169 aa4.62□□□□□ -1.67
Cacna1b-201ENSMUST00000041342 Gm11938Q9D3H4 131 aa4.61□□□□□ -1.67
Cacna1b-201ENSMUST00000041342 Lce1eQ9D139 143 aa4.58□□□□□ -1.68
Cacna1b-201ENSMUST00000041342 Gm11562A0PK51 136 aa4.56□□□□□ -1.68
Cacna1b-201ENSMUST00000041342 Gm11596B1AQB0 205 aa4.51□□□□□ -1.69
Cacna1b-201ENSMUST00000041342 Sprr2fO70557 76 aa4.5□□□□□ -1.69
Cacna1b-201ENSMUST00000041342 Gm11564A2A4L9 201 aa4.49□□□□□ -1.69
Cacna1b-201ENSMUST00000041342 Gm11563B1AQ90 168 aa4.49□□□□□ -1.69
Cacna1b-201ENSMUST00000041342 Gm11595B1AQA7 289 aa4.49□□□□□ -1.69
Cacna1b-201ENSMUST00000041342 Krtap4-8B1AQA8 209 aa4.49□□□□□ -1.69
Cacna1b-201ENSMUST00000041342 Krtap4-9B1AQA9 244 aa4.42□□□□□ -1.7
Cacna1b-201ENSMUST00000041342 Krtap31-1Q9D644 177 aa4.41□□□□□ -1.7
Cacna1b-201ENSMUST00000041342 Gm10024A0A0A0MQA4 119 aa4.39□□□□□ -1.71
Cacna1b-201ENSMUST00000041342 2300003K06RikA2A4M0 262 aa4.38□□□□□ -1.71
Cacna1b-201ENSMUST00000041342 Krtap4-13Q9D7P3 165 aa4.29□□□□□ -1.72
Cacna1b-201ENSMUST00000041342 Sprr2hO70559 108 aa4.28□□□□□ -1.72
Cacna1b-201ENSMUST00000041342 Krtap4-7Q9D732 168 aa4.27□□□□□ -1.73
Cacna1b-201ENSMUST00000041342 Syne2Q6ZWQ0 6874 aaKnown RBP4.27□□□□□ -1.73
Cacna1b-201ENSMUST00000041342 Lce1kJ3QP15 125 aa4.26□□□□□ -1.73
Cacna1b-201ENSMUST00000041342 Fsip2A2ARZ3 6995 aa4.25□□□□□ -1.73
Cacna1b-201ENSMUST00000041342 Lce1a1Q9CQH5 143 aa4.22□□□□□ -1.73
Cacna1b-201ENSMUST00000041342 Sprr2eO70556 76 aa4.21□□□□□ -1.74
Cacna1b-201ENSMUST00000041342 Mt1P02802 61 aaKnown RBP4.02□□□□□ -1.77
Cacna1b-201ENSMUST00000041342 Krtap4-16Q91W93 202 aa4.02□□□□□ -1.77
Cacna1b-201ENSMUST00000041342 Gm11555B1AQ89 175 aa4□□□□□ -1.77
Cacna1b-201ENSMUST00000041342 Mt3P28184 68 aa3.98□□□□□ -1.77
Cacna1b-201ENSMUST00000041342 Syne1Q6ZWR6 8799 aa3.97□□□□□ -1.77
Cacna1b-201ENSMUST00000041342 Krtap31-2Q8CAY5 177 aa3.9□□□□□ -1.78
Cacna1b-201ENSMUST00000041342 Krtap6-3A0A087WQL6 57 aa3.9□□□□□ -1.78
Cacna1b-201ENSMUST00000041342 Krtap20-2E9Q0A8 60 aa3.85□□□□□ -1.79
Cacna1b-201ENSMUST00000041342 ObscnA2AAJ9 8891 aaKnown RBP3.73□□□□□ -1.81
Cacna1b-201ENSMUST00000041342 Gm11554B1AQB2 190 aa3.67□□□□□ -1.82
Cacna1b-201ENSMUST00000041342 Sprr2bO70554 98 aa3.59□□□□□ -1.83
Cacna1b-201ENSMUST00000041342 Gm11568A2A4M2 211 aa3.49□□□□□ -1.85
Cacna1b-201ENSMUST00000041342 Krtap9-1Q64526 186 aa3.49□□□□□ -1.85
Cacna1b-201ENSMUST00000041342 Muc16A0A140LJ72 8478 aa3.44□□□□□ -1.86
Cacna1b-201ENSMUST00000041342 Macf1Q9QXZ0 7354 aaKnown RBP3.38□□□□□ -1.87
Cacna1b-201ENSMUST00000041342 Gm11559Q9D3H7 191 aa3.26□□□□□ -1.89
Cacna1b-201ENSMUST00000041342 Krtap5-2Q9D5Z7 189 aa3.24□□□□□ -1.89
Cacna1b-201ENSMUST00000041342 1110025L11RikO09048 78 aa3.2□□□□□ -1.9
Cacna1b-201ENSMUST00000041342 Krtap6-5Q925H3 78 aa3.2□□□□□ -1.9
Cacna1b-201ENSMUST00000041342 DstQ91ZU6 7393 aaKnown RBP3.16□□□□□ -1.9
Cacna1b-201ENSMUST00000041342 Kmt2dQ6PDK2 5588 aa3.1□□□□□ -1.91
Cacna1b-201ENSMUST00000041342 Gm4553A0A1B0GSA9 284 aa2.99□□□□□ -1.93
Cacna1b-201ENSMUST00000041342 Gm10153A0A1B0GRL1 320 aa2.98□□□□□ -1.93
Cacna1b-201ENSMUST00000041342 Eppk1Q8R0W0 6548 aa2.97□□□□□ -1.93
Cacna1b-201ENSMUST00000041342 Gm10229O08631 77 aa2.94□□□□□ -1.94
Cacna1b-201ENSMUST00000041342 Muc19Q6PZE0 7524 aa2.94□□□□□ -1.94
Cacna1b-201ENSMUST00000041342 Hmcn1D3YXG0 5634 aa2.93□□□□□ -1.94
Cacna1b-201ENSMUST00000041342 NebE9Q1W3 7152 aa2.9□□□□□ -1.95
Cacna1b-201ENSMUST00000041342 A0A1Y7VJH8 109 aa2.88□□□□□ -1.95
Cacna1b-201ENSMUST00000041342 Gm2431E9Q8S1 172 aa2.88□□□□□ -1.95
Cacna1b-201ENSMUST00000041342 Gm45337A0A1B0GS71 263 aa2.8□□□□□ -1.96
Cacna1b-201ENSMUST00000041342 Gm40460A0A1B0GR10 244 aa2.74□□□□□ -1.97
Cacna1b-201ENSMUST00000041342 Gm7579A0A1B0GRJ4 243 aa2.74□□□□□ -1.97
Cacna1b-201ENSMUST00000041342 Krtap5-5Q2TA51 241 aa2.74□□□□□ -1.97
Cacna1b-201ENSMUST00000041342 Krtap5-4Q62220 223 aa2.74□□□□□ -1.97
Cacna1b-201ENSMUST00000041342 Phgr1Q8K0G7 91 aa2.67□□□□□ -1.98
Cacna1b-201ENSMUST00000041342 Gm11639A0A1D5RLM8 5808 aa2.61□□□□□ -1.99
Cacna1b-201ENSMUST00000041342 A030005L19RikA0A1Y7VIU2 113 aa2.61□□□□□ -1.99
Cacna1b-201ENSMUST00000041342 AhnakE9Q616 5656 aaKnown RBP2.55□□□□□ -2
Cacna1b-201ENSMUST00000041342 A0A1Y7VLE6 161 aa2.54□□□□□ -2
Cacna1b-201ENSMUST00000041342 Gm39115A0A1B0GSH7 232 aa2.51□□□□□ -2.01
Cacna1b-201ENSMUST00000041342 Gpr98Q8VHN7 6298 aaKnown RBP2.49□□□□□ -2.01
Cacna1b-201ENSMUST00000041342 Krtap21-1Q925H4 128 aa2.44□□□□□ -2.02
Cacna1b-201ENSMUST00000041342 Krtap6-2O08884 159 aa2.41□□□□□ -2.02
Cacna1b-201ENSMUST00000041342 Gm11567Q9D141 195 aa2.26□□□□□ -2.05
Cacna1b-201ENSMUST00000041342 Gm45618A0A1B0GSA0 219 aa2.1□□□□□ -2.07
Cacna1b-201ENSMUST00000041342 Gm29735A0A1B0GT06 219 aa2.07□□□□□ -2.08
Cacna1b-201ENSMUST00000041342 A0A1Y7VJ07 166 aa1.68□□□□□ -2.14
Cacna1b-201ENSMUST00000041342 A0A286YCP9 139 aa1.46□□□□□ -2.18
Cacna1b-201ENSMUST00000041342 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Cacna1b-201ENSMUST00000041342 Gm4559A4IF42 199 aa1.11□□□□□ -2.23
Cacna1b-201ENSMUST00000041342 A030003K21RikA0A1Y7VIM3 128 aa0.95□□□□□ -2.26
Cacna1b-201ENSMUST00000041342 Krtap28-10A0A1Y7VP58 119 aa0.95□□□□□ -2.26
Cacna1b-201ENSMUST00000041342 Gm6217A0A1Y7VJK9 128 aa0.9□□□□□ -2.27
Cacna1b-201ENSMUST00000041342 A030005K14RikA0A1Y7VNY1 122 aa0.89□□□□□ -2.27
Cacna1b-201ENSMUST00000041342 A030014E15RikA0A1Y7VJV2 120 aa0.81□□□□□ -2.28
Cacna1b-201ENSMUST00000041342 Gm7544A0A1Y7VJ58 118 aa0.78□□□□□ -2.28
Cacna1b-201ENSMUST00000041342 Krtap28-13A0A087WQP5 138 aa0.77□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 8.2 ms