RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

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Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Krtap4-13Q9D7P3 165 aa6,3□□□□□ -1,4
Ccdc50-201ENSMUST00000039443 Fsip2A2ARZ3 6995 aa6,29□□□□□ -1,4
Ccdc50-201ENSMUST00000039443 Krtap19-4Q925H7 84 aa6,25□□□□□ -1,41
Ccdc50-201ENSMUST00000039443 Krtap28-13A0A087WQP5 138 aa6,21□□□□□ -1,41
Ccdc50-201ENSMUST00000039443 Lce1cQ9D1C5 147 aa6,21□□□□□ -1,42
Ccdc50-201ENSMUST00000039443 Gm38119A0A0A6YX29 146 aa6,2□□□□□ -1,42
Ccdc50-201ENSMUST00000039443 Sprr2kO70562 68 aa6,2□□□□□ -1,42
Ccdc50-201ENSMUST00000039443 Krtap6-3A0A087WQL6 57 aa6,17□□□□□ -1,42
Ccdc50-201ENSMUST00000039443 2300003K06RikA2A4M0 262 aa6,15□□□□□ -1,43
Ccdc50-201ENSMUST00000039443 Gm10100J3QK64 120 aa6,15□□□□□ -1,43
Ccdc50-201ENSMUST00000039443 Lce3bQ9CQM7 98 aa6,1□□□□□ -1,43
Ccdc50-201ENSMUST00000039443 Gm10142J3KMP7 120 aa6,06□□□□□ -1,44
Ccdc50-201ENSMUST00000039443 Sprr2iO70560 76 aa6,03□□□□□ -1,44
Ccdc50-201ENSMUST00000039443 Krtap4-7Q9D732 168 aa6,03□□□□□ -1,44
Ccdc50-201ENSMUST00000039443 A030005K14RikA0A1Y7VNY1 122 aa6,01□□□□□ -1,45
Ccdc50-201ENSMUST00000039443 A030005L19RikA0A1Y7VIU2 113 aa5,99□□□□□ -1,45
Ccdc50-201ENSMUST00000039443 Lce1fB9EJP6 147 aa5,99□□□□□ -1,45
Ccdc50-201ENSMUST00000039443 Lce1a1Q9CQH5 143 aa5,99□□□□□ -1,45
Ccdc50-201ENSMUST00000039443 Lce1lQ9D1G7 135 aa5,99□□□□□ -1,45
Ccdc50-201ENSMUST00000039443 Sprr2hO70559 108 aa5,86□□□□□ -1,47
Ccdc50-201ENSMUST00000039443 Lce3cQ91V05 98 aa5,85□□□□□ -1,47
Ccdc50-201ENSMUST00000039443 Sprr2eO70556 76 aa5,83□□□□□ -1,48
Ccdc50-201ENSMUST00000039443 Lce3dE9Q8V1 98 aa5,82□□□□□ -1,48
Ccdc50-201ENSMUST00000039443 Sprr2fO70557 76 aa5,73□□□□□ -1,49
Ccdc50-201ENSMUST00000039443 Lce3eF8VQJ0 98 aa5,71□□□□□ -1,5
Ccdc50-201ENSMUST00000039443 Lce3fQ6PAI4 98 aa5,71□□□□□ -1,5
Ccdc50-201ENSMUST00000039443 Gm7544A0A1Y7VJ58 118 aa5,69□□□□□ -1,5
Ccdc50-201ENSMUST00000039443 Syne1Q6ZWR6 8799 aa5,67□□□□□ -1,5
Ccdc50-201ENSMUST00000039443 Krtap20-2E9Q0A8 60 aa5,65□□□□□ -1,51
Ccdc50-201ENSMUST00000039443 Lce3aQ497I5 98 aa5,61□□□□□ -1,51
Ccdc50-201ENSMUST00000039443 Krtap5-2Q9D5Z7 189 aa5,59□□□□□ -1,51
Ccdc50-201ENSMUST00000039443 Lce1kJ3QP15 125 aa5,58□□□□□ -1,52
Ccdc50-201ENSMUST00000039443 Krtap31-1Q9D644 177 aa5,5□□□□□ -1,53
Ccdc50-201ENSMUST00000039443 A0A1Y7VJ07 166 aa5,43□□□□□ -1,54
Ccdc50-201ENSMUST00000039443 Gm11568A2A4M2 211 aa5,42□□□□□ -1,54
Ccdc50-201ENSMUST00000039443 Krtap9-1Q64526 186 aa5,42□□□□□ -1,54
Ccdc50-201ENSMUST00000039443 ObscnA2AAJ9 8891 aaKnown RBP5,4□□□□□ -1,54
Ccdc50-201ENSMUST00000039443 Gm11559Q9D3H7 191 aa5,33□□□□□ -1,56
Ccdc50-201ENSMUST00000039443 Gm4553A0A1B0GSA9 284 aa5,28□□□□□ -1,56
Ccdc50-201ENSMUST00000039443 Mt1P02802 61 aaKnown RBP5,27□□□□□ -1,57
Ccdc50-201ENSMUST00000039443 A030014E15RikA0A1Y7VJV2 120 aa5,21□□□□□ -1,58
Ccdc50-201ENSMUST00000039443 Gm11554B1AQB2 190 aa5,14□□□□□ -1,59
Ccdc50-201ENSMUST00000039443 Krtap4-16Q91W93 202 aa5,14□□□□□ -1,59
Ccdc50-201ENSMUST00000039443 Gm45337A0A1B0GS71 263 aa5,12□□□□□ -1,59
Ccdc50-201ENSMUST00000039443 Gm10153A0A1B0GRL1 320 aa5,11□□□□□ -1,59
Ccdc50-201ENSMUST00000039443 Gm2431E9Q8S1 172 aa5,08□□□□□ -1,6
Ccdc50-201ENSMUST00000039443 Macf1Q9QXZ0 7354 aaKnown RBP5,06□□□□□ -1,6
Ccdc50-201ENSMUST00000039443 A030003K21RikA0A1Y7VIM3 128 aa5,05□□□□□ -1,6
Ccdc50-201ENSMUST00000039443 Kmt2dQ6PDK2 5588 aa5,01□□□□□ -1,61
Ccdc50-201ENSMUST00000039443 Gm40460A0A1B0GR10 244 aa4,96□□□□□ -1,62
Ccdc50-201ENSMUST00000039443 Gm7579A0A1B0GRJ4 243 aa4,96□□□□□ -1,62
Ccdc50-201ENSMUST00000039443 Krtap5-5Q2TA51 241 aa4,96□□□□□ -1,62
Ccdc50-201ENSMUST00000039443 Krtap5-4Q62220 223 aa4,96□□□□□ -1,62
Ccdc50-201ENSMUST00000039443 Eppk1Q8R0W0 6548 aa4,96□□□□□ -1,62
Ccdc50-201ENSMUST00000039443 Gm10024A0A0A0MQA4 119 aa4,91□□□□□ -1,62
Ccdc50-201ENSMUST00000039443 Hmcn1D3YXG0 5634 aa4,84□□□□□ -1,63
Ccdc50-201ENSMUST00000039443 Mt3P28184 68 aa4,8□□□□□ -1,64
Ccdc50-201ENSMUST00000039443 Gm39115A0A1B0GSH7 232 aa4,78□□□□□ -1,64
Ccdc50-201ENSMUST00000039443 Gm6217A0A1Y7VJK9 128 aa4,78□□□□□ -1,64
Ccdc50-201ENSMUST00000039443 A0A286YCP9 139 aa4,68□□□□□ -1,66
Ccdc50-201ENSMUST00000039443 Gm11639A0A1D5RLM8 5808 aa4,62□□□□□ -1,67
Ccdc50-201ENSMUST00000039443 Muc19Q6PZE0 7524 aa4,59□□□□□ -1,68
Ccdc50-201ENSMUST00000039443 DstQ91ZU6 7393 aaKnown RBP4,49□□□□□ -1,69
Ccdc50-201ENSMUST00000039443 Gm45618A0A1B0GSA0 219 aa4,35□□□□□ -1,71
Ccdc50-201ENSMUST00000039443 Gpr98Q8VHN7 6298 aaKnown RBP4,3□□□□□ -1,72
Ccdc50-201ENSMUST00000039443 AhnakE9Q616 5656 aaKnown RBP4,25□□□□□ -1,73
Ccdc50-201ENSMUST00000039443 NebE9Q1W3 7152 aa4,2□□□□□ -1,74
Ccdc50-201ENSMUST00000039443 1110025L11RikO09048 78 aa4,13□□□□□ -1,75
Ccdc50-201ENSMUST00000039443 Krtap6-5Q925H3 78 aa4,13□□□□□ -1,75
Ccdc50-201ENSMUST00000039443 Muc16A0A140LJ72 8478 aa4,13□□□□□ -1,75
Ccdc50-201ENSMUST00000039443 Sprr2bO70554 98 aa4,03□□□□□ -1,76
Ccdc50-201ENSMUST00000039443 Krtap31-2Q8CAY5 177 aa3,82□□□□□ -1,8
Ccdc50-201ENSMUST00000039443 Gm29735A0A1B0GT06 219 aa3,69□□□□□ -1,82
Ccdc50-201ENSMUST00000039443 Gm10229O08631 77 aa3,63□□□□□ -1,83
Ccdc50-201ENSMUST00000039443 Gm11567Q9D141 195 aa3,51□□□□□ -1,85
Ccdc50-201ENSMUST00000039443 Phgr1Q8K0G7 91 aa3,44□□□□□ -1,86
Ccdc50-201ENSMUST00000039443 Krtap21-1Q925H4 128 aa3,41□□□□□ -1,86
Ccdc50-201ENSMUST00000039443 Krtap6-2O08884 159 aa3,01□□□□□ -1,93
Ccdc50-201ENSMUST00000039443 Krtap5-1Q64507 230 aa2,6□□□□□ -1,99
Ccdc50-201ENSMUST00000039443 Gm4559A4IF42 199 aa2,45□□□□□ -2,02
Retrieved 80 of 22,080 RNA–protein pairs in 47,9 ms