RNA–Protein interactions for RNA: ENSMUST00000039144.6

Clstn1-201, Transcript of Calsyntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn1, Length 3,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1-201ENSMUST00000039144 Gm10100J3QK64 120 aa5.12□□□□□ -1.59
Clstn1-201ENSMUST00000039144 Fsip2A2ARZ3 6995 aa5.09□□□□□ -1.59
Clstn1-201ENSMUST00000039144 Lce1fB9EJP6 147 aa5.02□□□□□ -1.61
Clstn1-201ENSMUST00000039144 Lce1a1Q9CQH5 143 aa5.02□□□□□ -1.61
Clstn1-201ENSMUST00000039144 Lce3bQ9CQM7 98 aa5.01□□□□□ -1.61
Clstn1-201ENSMUST00000039144 Krtap4-13Q9D7P3 165 aa4.98□□□□□ -1.61
Clstn1-201ENSMUST00000039144 Gm38119A0A0A6YX29 146 aa4.94□□□□□ -1.62
Clstn1-201ENSMUST00000039144 Gm10142J3KMP7 120 aa4.93□□□□□ -1.62
Clstn1-201ENSMUST00000039144 2300003K06RikA2A4M0 262 aa4.89□□□□□ -1.63
Clstn1-201ENSMUST00000039144 Lce3cQ91V05 98 aa4.89□□□□□ -1.63
Clstn1-201ENSMUST00000039144 ObscnA2AAJ9 8891 aaKnown RBP4.87□□□□□ -1.63
Clstn1-201ENSMUST00000039144 Krtap6-3A0A087WQL6 57 aa4.86□□□□□ -1.63
Clstn1-201ENSMUST00000039144 Lce3dE9Q8V1 98 aa4.82□□□□□ -1.64
Clstn1-201ENSMUST00000039144 Sprr2kO70562 68 aa4.81□□□□□ -1.64
Clstn1-201ENSMUST00000039144 Sprr2iO70560 76 aa4.79□□□□□ -1.64
Clstn1-201ENSMUST00000039144 Krtap4-7Q9D732 168 aa4.78□□□□□ -1.64
Clstn1-201ENSMUST00000039144 Krtap19-4Q925H7 84 aa4.73□□□□□ -1.65
Clstn1-201ENSMUST00000039144 Krtap4-16Q91W93 202 aa4.72□□□□□ -1.65
Clstn1-201ENSMUST00000039144 A0A1Y7VJH8 109 aa4.7□□□□□ -1.66
Clstn1-201ENSMUST00000039144 Lce3eF8VQJ0 98 aa4.67□□□□□ -1.66
Clstn1-201ENSMUST00000039144 Lce3fQ6PAI4 98 aa4.67□□□□□ -1.66
Clstn1-201ENSMUST00000039144 Lce1lQ9D1G7 135 aa4.66□□□□□ -1.66
Clstn1-201ENSMUST00000039144 Sprr2hO70559 108 aa4.63□□□□□ -1.67
Clstn1-201ENSMUST00000039144 Macf1Q9QXZ0 7354 aaKnown RBP4.62□□□□□ -1.67
Clstn1-201ENSMUST00000039144 Lce3aQ497I5 98 aa4.59□□□□□ -1.68
Clstn1-201ENSMUST00000039144 Krtap5-2Q9D5Z7 189 aa4.58□□□□□ -1.68
Clstn1-201ENSMUST00000039144 Krtap31-1Q9D644 177 aa4.54□□□□□ -1.68
Clstn1-201ENSMUST00000039144 Sprr2fO70557 76 aa4.53□□□□□ -1.68
Clstn1-201ENSMUST00000039144 Sprr2eO70556 76 aa4.53□□□□□ -1.68
Clstn1-201ENSMUST00000039144 Lce1kJ3QP15 125 aa4.51□□□□□ -1.69
Clstn1-201ENSMUST00000039144 Krtap20-2E9Q0A8 60 aa4.5□□□□□ -1.69
Clstn1-201ENSMUST00000039144 Muc19Q6PZE0 7524 aa4.48□□□□□ -1.69
Clstn1-201ENSMUST00000039144 Gm11568A2A4M2 211 aa4.46□□□□□ -1.7
Clstn1-201ENSMUST00000039144 Krtap9-1Q64526 186 aa4.46□□□□□ -1.7
Clstn1-201ENSMUST00000039144 Mt1P02802 61 aaKnown RBP4.37□□□□□ -1.71
Clstn1-201ENSMUST00000039144 Gm4553A0A1B0GSA9 284 aa4.28□□□□□ -1.72
Clstn1-201ENSMUST00000039144 Gm11559Q9D3H7 191 aa4.27□□□□□ -1.73
Clstn1-201ENSMUST00000039144 Gm10153A0A1B0GRL1 320 aa4.25□□□□□ -1.73
Clstn1-201ENSMUST00000039144 Gm45337A0A1B0GS71 263 aa4.21□□□□□ -1.73
Clstn1-201ENSMUST00000039144 Gm2431E9Q8S1 172 aa4.13□□□□□ -1.75
Clstn1-201ENSMUST00000039144 Gm40460A0A1B0GR10 244 aa4.09□□□□□ -1.75
Clstn1-201ENSMUST00000039144 Gm7579A0A1B0GRJ4 243 aa4.09□□□□□ -1.75
Clstn1-201ENSMUST00000039144 Krtap5-5Q2TA51 241 aa4.09□□□□□ -1.75
Clstn1-201ENSMUST00000039144 Krtap5-4Q62220 223 aa4.09□□□□□ -1.75
Clstn1-201ENSMUST00000039144 DstQ91ZU6 7393 aaKnown RBP4.07□□□□□ -1.76
Clstn1-201ENSMUST00000039144 A030005L19RikA0A1Y7VIU2 113 aa4.06□□□□□ -1.76
Clstn1-201ENSMUST00000039144 Gm10024A0A0A0MQA4 119 aa4.03□□□□□ -1.76
Clstn1-201ENSMUST00000039144 Gm11554B1AQB2 190 aa4.02□□□□□ -1.77
Clstn1-201ENSMUST00000039144 Kmt2dQ6PDK2 5588 aa3.97□□□□□ -1.77
Clstn1-201ENSMUST00000039144 Mt3P28184 68 aa3.93□□□□□ -1.78
Clstn1-201ENSMUST00000039144 A0A1Y7VLE6 161 aa3.92□□□□□ -1.78
Clstn1-201ENSMUST00000039144 Hmcn1D3YXG0 5634 aa3.9□□□□□ -1.79
Clstn1-201ENSMUST00000039144 Gm39115A0A1B0GSH7 232 aa3.89□□□□□ -1.79
Clstn1-201ENSMUST00000039144 Eppk1Q8R0W0 6548 aa3.84□□□□□ -1.79
Clstn1-201ENSMUST00000039144 Krtap31-2Q8CAY5 177 aa3.82□□□□□ -1.8
Clstn1-201ENSMUST00000039144 Gm11639A0A1D5RLM8 5808 aa3.6□□□□□ -1.83
Clstn1-201ENSMUST00000039144 NebE9Q1W3 7152 aa3.58□□□□□ -1.84
Clstn1-201ENSMUST00000039144 Gpr98Q8VHN7 6298 aaKnown RBP3.5□□□□□ -1.85
Clstn1-201ENSMUST00000039144 Gm45618A0A1B0GSA0 219 aa3.49□□□□□ -1.85
Clstn1-201ENSMUST00000039144 AhnakE9Q616 5656 aaKnown RBP3.39□□□□□ -1.87
Clstn1-201ENSMUST00000039144 A0A1Y7VJ07 166 aa3.26□□□□□ -1.89
Clstn1-201ENSMUST00000039144 1110025L11RikO09048 78 aa3.23□□□□□ -1.89
Clstn1-201ENSMUST00000039144 Krtap6-5Q925H3 78 aa3.23□□□□□ -1.89
Clstn1-201ENSMUST00000039144 Gm29735A0A1B0GT06 219 aa3.06□□□□□ -1.92
Clstn1-201ENSMUST00000039144 Gm11567Q9D141 195 aa2.91□□□□□ -1.94
Clstn1-201ENSMUST00000039144 Gm10229O08631 77 aa2.86□□□□□ -1.95
Clstn1-201ENSMUST00000039144 Sprr2bO70554 98 aa2.83□□□□□ -1.96
Clstn1-201ENSMUST00000039144 Phgr1Q8K0G7 91 aa2.8□□□□□ -1.96
Clstn1-201ENSMUST00000039144 A0A286YCP9 139 aa2.75□□□□□ -1.97
Clstn1-201ENSMUST00000039144 Krtap21-1Q925H4 128 aa2.65□□□□□ -1.98
Clstn1-201ENSMUST00000039144 Krtap6-2O08884 159 aa2.48□□□□□ -2.01
Clstn1-201ENSMUST00000039144 A030003K21RikA0A1Y7VIM3 128 aa2.09□□□□□ -2.07
Clstn1-201ENSMUST00000039144 Krtap5-1Q64507 230 aa2.04□□□□□ -2.08
Clstn1-201ENSMUST00000039144 Gm7544A0A1Y7VJ58 118 aa1.77□□□□□ -2.13
Clstn1-201ENSMUST00000039144 Gm4559A4IF42 199 aa1.76□□□□□ -2.13
Clstn1-201ENSMUST00000039144 Krtap28-10A0A1Y7VP58 119 aa1.69□□□□□ -2.14
Clstn1-201ENSMUST00000039144 Krtap28-13A0A087WQP5 138 aa1.64□□□□□ -2.15
Clstn1-201ENSMUST00000039144 Gm6217A0A1Y7VJK9 128 aa1.57□□□□□ -2.16
Clstn1-201ENSMUST00000039144 A030005K14RikA0A1Y7VNY1 122 aa1.53□□□□□ -2.16
Clstn1-201ENSMUST00000039144 A030014E15RikA0A1Y7VJV2 120 aa1.14□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 96.2 ms