RNA–Protein interactions for RNA: ENSMUST00000037903.14

Pkp4-201, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,378 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-201ENSMUST00000037903 Syne2Q6ZWQ0 6874 aaKnown RBP3.6□□□□□ -1.83
Pkp4-201ENSMUST00000037903 Krtap4-9B1AQA9 244 aa3.6□□□□□ -1.83
Pkp4-201ENSMUST00000037903 Lce1bQ9D149 137 aa3.59□□□□□ -1.83
Pkp4-201ENSMUST00000037903 Muc16A0A140LJ72 8478 aa3.57□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Lce1fB9EJP6 147 aa3.56□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Lce1cQ9D1C5 147 aa3.56□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Lce1lQ9D1G7 135 aa3.56□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Lce3aQ497I5 98 aa3.56□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Sprr2iO70560 76 aa3.55□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Gm11938Q9D3H4 131 aa3.55□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Krtap19-4Q925H7 84 aa3.54□□□□□ -1.84
Pkp4-201ENSMUST00000037903 Sprr2dO70555 85 aa3.51□□□□□ -1.85
Pkp4-201ENSMUST00000037903 Lce1eQ9D139 143 aa3.5□□□□□ -1.85
Pkp4-201ENSMUST00000037903 Krtap4-13Q9D7P3 165 aa3.5□□□□□ -1.85
Pkp4-201ENSMUST00000037903 2300003K06RikA2A4M0 262 aa3.5□□□□□ -1.85
Pkp4-201ENSMUST00000037903 Gm11562A0PK51 136 aa3.48□□□□□ -1.85
Pkp4-201ENSMUST00000037903 Krtap4-7Q9D732 168 aa3.41□□□□□ -1.86
Pkp4-201ENSMUST00000037903 Lce1kJ3QP15 125 aa3.38□□□□□ -1.87
Pkp4-201ENSMUST00000037903 Lce1a1Q9CQH5 143 aa3.35□□□□□ -1.87
Pkp4-201ENSMUST00000037903 Macf1Q9QXZ0 7354 aaKnown RBP3.35□□□□□ -1.87
Pkp4-201ENSMUST00000037903 ObscnA2AAJ9 8891 aaKnown RBP3.33□□□□□ -1.88
Pkp4-201ENSMUST00000037903 Gm11555B1AQ89 175 aa3.32□□□□□ -1.88
Pkp4-201ENSMUST00000037903 Gm10024A0A0A0MQA4 119 aa3.2□□□□□ -1.9
Pkp4-201ENSMUST00000037903 Sprr2hO70559 108 aa3.17□□□□□ -1.9
Pkp4-201ENSMUST00000037903 Krtap31-1Q9D644 177 aa3.16□□□□□ -1.9
Pkp4-201ENSMUST00000037903 Sprr2eO70556 76 aa3.14□□□□□ -1.91
Pkp4-201ENSMUST00000037903 Krtap20-2E9Q0A8 60 aa3.13□□□□□ -1.91
Pkp4-201ENSMUST00000037903 Mt1P02802 61 aaKnown RBP3.09□□□□□ -1.91
Pkp4-201ENSMUST00000037903 Krtap4-16Q91W93 202 aa3.05□□□□□ -1.92
Pkp4-201ENSMUST00000037903 Krtap6-3A0A087WQL6 57 aa3.04□□□□□ -1.92
Pkp4-201ENSMUST00000037903 Sprr2fO70557 76 aa3.03□□□□□ -1.92
Pkp4-201ENSMUST00000037903 Muc19Q6PZE0 7524 aa3.01□□□□□ -1.93
Pkp4-201ENSMUST00000037903 Gm11554B1AQB2 190 aa2.99□□□□□ -1.93
Pkp4-201ENSMUST00000037903 Mt3P28184 68 aa2.97□□□□□ -1.93
Pkp4-201ENSMUST00000037903 DstQ91ZU6 7393 aaKnown RBP2.84□□□□□ -1.95
Pkp4-201ENSMUST00000037903 Gm11568A2A4M2 211 aa2.84□□□□□ -1.96
Pkp4-201ENSMUST00000037903 Krtap9-1Q64526 186 aa2.84□□□□□ -1.96
Pkp4-201ENSMUST00000037903 NebE9Q1W3 7152 aa2.81□□□□□ -1.96
Pkp4-201ENSMUST00000037903 Krtap31-2Q8CAY5 177 aa2.75□□□□□ -1.97
Pkp4-201ENSMUST00000037903 A0A1Y7VJH8 109 aa2.72□□□□□ -1.97
Pkp4-201ENSMUST00000037903 Krtap28-10A0A1Y7VP58 119 aa2.68□□□□□ -1.98
Pkp4-201ENSMUST00000037903 Kmt2dQ6PDK2 5588 aa2.68□□□□□ -1.98
Pkp4-201ENSMUST00000037903 Hmcn1D3YXG0 5634 aa2.67□□□□□ -1.98
Pkp4-201ENSMUST00000037903 A0A1Y7VLE6 161 aa2.64□□□□□ -1.99
Pkp4-201ENSMUST00000037903 Krtap5-2Q9D5Z7 189 aa2.62□□□□□ -1.99
Pkp4-201ENSMUST00000037903 Gm11559Q9D3H7 191 aa2.61□□□□□ -1.99
Pkp4-201ENSMUST00000037903 A030005L19RikA0A1Y7VIU2 113 aa2.55□□□□□ -2
Pkp4-201ENSMUST00000037903 Krtap28-13A0A087WQP5 138 aa2.52□□□□□ -2.01
Pkp4-201ENSMUST00000037903 A030005K14RikA0A1Y7VNY1 122 aa2.47□□□□□ -2.01
Pkp4-201ENSMUST00000037903 Gm7544A0A1Y7VJ58 118 aa2.46□□□□□ -2.02
Pkp4-201ENSMUST00000037903 Gm11639A0A1D5RLM8 5808 aa2.44□□□□□ -2.02
Pkp4-201ENSMUST00000037903 1110025L11RikO09048 78 aa2.43□□□□□ -2.02
Pkp4-201ENSMUST00000037903 Krtap6-5Q925H3 78 aa2.43□□□□□ -2.02
Pkp4-201ENSMUST00000037903 Gm10153A0A1B0GRL1 320 aa2.43□□□□□ -2.02
Pkp4-201ENSMUST00000037903 Gm4553A0A1B0GSA9 284 aa2.42□□□□□ -2.02
Pkp4-201ENSMUST00000037903 Gm2431E9Q8S1 172 aa2.37□□□□□ -2.03
Pkp4-201ENSMUST00000037903 Gpr98Q8VHN7 6298 aaKnown RBP2.36□□□□□ -2.03
Pkp4-201ENSMUST00000037903 Eppk1Q8R0W0 6548 aa2.35□□□□□ -2.03
Pkp4-201ENSMUST00000037903 A030003K21RikA0A1Y7VIM3 128 aa2.3□□□□□ -2.04
Pkp4-201ENSMUST00000037903 Gm45337A0A1B0GS71 263 aa2.27□□□□□ -2.05
Pkp4-201ENSMUST00000037903 Sprr2bO70554 98 aa2.26□□□□□ -2.05
Pkp4-201ENSMUST00000037903 A0A1Y7VJ07 166 aa2.23□□□□□ -2.05
Pkp4-201ENSMUST00000037903 Gm6217A0A1Y7VJK9 128 aa2.22□□□□□ -2.05
Pkp4-201ENSMUST00000037903 Gm10229O08631 77 aa2.21□□□□□ -2.06
Pkp4-201ENSMUST00000037903 Gm40460A0A1B0GR10 244 aa2.19□□□□□ -2.06
Pkp4-201ENSMUST00000037903 Gm7579A0A1B0GRJ4 243 aa2.19□□□□□ -2.06
Pkp4-201ENSMUST00000037903 Krtap5-5Q2TA51 241 aa2.19□□□□□ -2.06
Pkp4-201ENSMUST00000037903 Krtap5-4Q62220 223 aa2.19□□□□□ -2.06
Pkp4-201ENSMUST00000037903 AhnakE9Q616 5656 aaKnown RBP2.18□□□□□ -2.06
Pkp4-201ENSMUST00000037903 A030014E15RikA0A1Y7VJV2 120 aa2.09□□□□□ -2.07
Pkp4-201ENSMUST00000037903 Gm39115A0A1B0GSH7 232 aa2.03□□□□□ -2.08
Pkp4-201ENSMUST00000037903 Phgr1Q8K0G7 91 aa2□□□□□ -2.09
Pkp4-201ENSMUST00000037903 Krtap21-1Q925H4 128 aa1.89□□□□□ -2.11
Pkp4-201ENSMUST00000037903 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Pkp4-201ENSMUST00000037903 Krtap6-2O08884 159 aa1.86□□□□□ -2.11
Pkp4-201ENSMUST00000037903 Gm45618A0A1B0GSA0 219 aa1.81□□□□□ -2.12
Pkp4-201ENSMUST00000037903 A0A286YCP9 139 aa1.8□□□□□ -2.12
Pkp4-201ENSMUST00000037903 Gm29735A0A1B0GT06 219 aa1.64□□□□□ -2.15
Pkp4-201ENSMUST00000037903 Krtap5-1Q64507 230 aa1.17□□□□□ -2.22
Pkp4-201ENSMUST00000037903 Gm4559A4IF42 199 aa0.97□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 12.6 ms