RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Lce3bQ9CQM7 98 aa7.39□□□□□ -1.23
Cln6-201ENSMUST00000034776 Lce1cQ9D1C5 147 aa7.37□□□□□ -1.23
Cln6-201ENSMUST00000034776 Krtap19-4Q925H7 84 aa7.33□□□□□ -1.24
Cln6-201ENSMUST00000034776 Krtap4-13Q9D7P3 165 aa7.3□□□□□ -1.24
Cln6-201ENSMUST00000034776 2300003K06RikA2A4M0 262 aa7.26□□□□□ -1.25
Cln6-201ENSMUST00000034776 Sprr2kO70562 68 aa7.15□□□□□ -1.26
Cln6-201ENSMUST00000034776 Lce1fB9EJP6 147 aa7.06□□□□□ -1.28
Cln6-201ENSMUST00000034776 Lce1a1Q9CQH5 143 aa7.06□□□□□ -1.28
Cln6-201ENSMUST00000034776 Gm10100J3QK64 120 aa7.03□□□□□ -1.28
Cln6-201ENSMUST00000034776 Krtap4-7Q9D732 168 aa7.03□□□□□ -1.28
Cln6-201ENSMUST00000034776 Lce3cQ91V05 98 aa7□□□□□ -1.29
Cln6-201ENSMUST00000034776 Lce1kJ3QP15 125 aa6.94□□□□□ -1.3
Cln6-201ENSMUST00000034776 A0A1Y7VJH8 109 aa6.92□□□□□ -1.3
Cln6-201ENSMUST00000034776 Lce3eF8VQJ0 98 aa6.91□□□□□ -1.3
Cln6-201ENSMUST00000034776 Lce3fQ6PAI4 98 aa6.91□□□□□ -1.3
Cln6-201ENSMUST00000034776 Sprr2iO70560 76 aa6.89□□□□□ -1.31
Cln6-201ENSMUST00000034776 ObscnA2AAJ9 8891 aaKnown RBP6.88□□□□□ -1.31
Cln6-201ENSMUST00000034776 Lce3dE9Q8V1 98 aa6.88□□□□□ -1.31
Cln6-201ENSMUST00000034776 Gm10142J3KMP7 120 aa6.86□□□□□ -1.31
Cln6-201ENSMUST00000034776 Mt1P02802 61 aaKnown RBP6.83□□□□□ -1.32
Cln6-201ENSMUST00000034776 Krtap6-3A0A087WQL6 57 aa6.8□□□□□ -1.32
Cln6-201ENSMUST00000034776 Lce1lQ9D1G7 135 aa6.8□□□□□ -1.32
Cln6-201ENSMUST00000034776 Gm11568A2A4M2 211 aa6.73□□□□□ -1.33
Cln6-201ENSMUST00000034776 Krtap9-1Q64526 186 aa6.73□□□□□ -1.33
Cln6-201ENSMUST00000034776 Krtap5-2Q9D5Z7 189 aa6.72□□□□□ -1.33
Cln6-201ENSMUST00000034776 Krtap20-2E9Q0A8 60 aa6.71□□□□□ -1.34
Cln6-201ENSMUST00000034776 Sprr2hO70559 108 aa6.7□□□□□ -1.34
Cln6-201ENSMUST00000034776 Lce3aQ497I5 98 aa6.61□□□□□ -1.35
Cln6-201ENSMUST00000034776 Gm10153A0A1B0GRL1 320 aa6.38□□□□□ -1.39
Cln6-201ENSMUST00000034776 Sprr2eO70556 76 aa6.37□□□□□ -1.39
Cln6-201ENSMUST00000034776 Gm4553A0A1B0GSA9 284 aa6.2□□□□□ -1.42
Cln6-201ENSMUST00000034776 Gm11559Q9D3H7 191 aa6.16□□□□□ -1.42
Cln6-201ENSMUST00000034776 Gm45337A0A1B0GS71 263 aa6.14□□□□□ -1.43
Cln6-201ENSMUST00000034776 Macf1Q9QXZ0 7354 aaKnown RBP6.1□□□□□ -1.43
Cln6-201ENSMUST00000034776 Mt3P28184 68 aa6.09□□□□□ -1.43
Cln6-201ENSMUST00000034776 A0A1Y7VLE6 161 aa6.07□□□□□ -1.44
Cln6-201ENSMUST00000034776 Gm2431E9Q8S1 172 aa5.99□□□□□ -1.45
Cln6-201ENSMUST00000034776 Sprr2fO70557 76 aa5.98□□□□□ -1.45
Cln6-201ENSMUST00000034776 Krtap31-1Q9D644 177 aa5.97□□□□□ -1.45
Cln6-201ENSMUST00000034776 Gm40460A0A1B0GR10 244 aa5.96□□□□□ -1.45
Cln6-201ENSMUST00000034776 Gm7579A0A1B0GRJ4 243 aa5.96□□□□□ -1.45
Cln6-201ENSMUST00000034776 Krtap5-5Q2TA51 241 aa5.96□□□□□ -1.45
Cln6-201ENSMUST00000034776 Krtap5-4Q62220 223 aa5.96□□□□□ -1.45
Cln6-201ENSMUST00000034776 Hmcn1D3YXG0 5634 aa5.91□□□□□ -1.46
Cln6-201ENSMUST00000034776 Gm11554B1AQB2 190 aa5.9□□□□□ -1.47
Cln6-201ENSMUST00000034776 Gm10024A0A0A0MQA4 119 aa5.71□□□□□ -1.5
Cln6-201ENSMUST00000034776 Kmt2dQ6PDK2 5588 aa5.68□□□□□ -1.5
Cln6-201ENSMUST00000034776 A030005L19RikA0A1Y7VIU2 113 aa5.61□□□□□ -1.51
Cln6-201ENSMUST00000034776 Gm39115A0A1B0GSH7 232 aa5.55□□□□□ -1.52
Cln6-201ENSMUST00000034776 Krtap4-16Q91W93 202 aa5.54□□□□□ -1.52
Cln6-201ENSMUST00000034776 Krtap31-2Q8CAY5 177 aa5.43□□□□□ -1.54
Cln6-201ENSMUST00000034776 DstQ91ZU6 7393 aaKnown RBP5.25□□□□□ -1.57
Cln6-201ENSMUST00000034776 Muc16A0A140LJ72 8478 aa5.24□□□□□ -1.57
Cln6-201ENSMUST00000034776 Eppk1Q8R0W0 6548 aa5.19□□□□□ -1.58
Cln6-201ENSMUST00000034776 1110025L11RikO09048 78 aa5.17□□□□□ -1.58
Cln6-201ENSMUST00000034776 Krtap6-5Q925H3 78 aa5.17□□□□□ -1.58
Cln6-201ENSMUST00000034776 Muc19Q6PZE0 7524 aa5.16□□□□□ -1.58
Cln6-201ENSMUST00000034776 Gm11639A0A1D5RLM8 5808 aa5.09□□□□□ -1.59
Cln6-201ENSMUST00000034776 AhnakE9Q616 5656 aaKnown RBP4.93□□□□□ -1.62
Cln6-201ENSMUST00000034776 A0A1Y7VJ07 166 aa4.89□□□□□ -1.63
Cln6-201ENSMUST00000034776 Gm45618A0A1B0GSA0 219 aa4.83□□□□□ -1.64
Cln6-201ENSMUST00000034776 NebE9Q1W3 7152 aa4.65□□□□□ -1.66
Cln6-201ENSMUST00000034776 Sprr2bO70554 98 aa4.58□□□□□ -1.68
Cln6-201ENSMUST00000034776 Gm10229O08631 77 aa4.57□□□□□ -1.68
Cln6-201ENSMUST00000034776 Gm29735A0A1B0GT06 219 aa4.5□□□□□ -1.69
Cln6-201ENSMUST00000034776 Gpr98Q8VHN7 6298 aaKnown RBP4.5□□□□□ -1.69
Cln6-201ENSMUST00000034776 Gm11567Q9D141 195 aa4.46□□□□□ -1.69
Cln6-201ENSMUST00000034776 Krtap21-1Q925H4 128 aa4.25□□□□□ -1.73
Cln6-201ENSMUST00000034776 A0A286YCP9 139 aa4.06□□□□□ -1.76
Cln6-201ENSMUST00000034776 Phgr1Q8K0G7 91 aa3.96□□□□□ -1.78
Cln6-201ENSMUST00000034776 Krtap6-2O08884 159 aa3.9□□□□□ -1.79
Cln6-201ENSMUST00000034776 A030003K21RikA0A1Y7VIM3 128 aa2.92□□□□□ -1.94
Cln6-201ENSMUST00000034776 Krtap5-1Q64507 230 aa2.81□□□□□ -1.96
Cln6-201ENSMUST00000034776 Krtap28-10A0A1Y7VP58 119 aa2.78□□□□□ -1.96
Cln6-201ENSMUST00000034776 Krtap28-13A0A087WQP5 138 aa2.63□□□□□ -1.99
Cln6-201ENSMUST00000034776 Gm7544A0A1Y7VJ58 118 aa2.62□□□□□ -1.99
Cln6-201ENSMUST00000034776 Gm4559A4IF42 199 aa2.59□□□□□ -2
Cln6-201ENSMUST00000034776 A030005K14RikA0A1Y7VNY1 122 aa2.57□□□□□ -2
Cln6-201ENSMUST00000034776 Gm6217A0A1Y7VJK9 128 aa2.31□□□□□ -2.04
Cln6-201ENSMUST00000034776 A030014E15RikA0A1Y7VJV2 120 aa2.14□□□□□ -2.07
Retrieved 80 of 22,080 RNA–protein pairs in 7.5 ms