RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Lce3bQ9CQM7 98 aa7,39□□□□□ -1,23
Cln6-201ENSMUST00000034776 Lce1cQ9D1C5 147 aa7,37□□□□□ -1,23
Cln6-201ENSMUST00000034776 Krtap19-4Q925H7 84 aa7,33□□□□□ -1,24
Cln6-201ENSMUST00000034776 Krtap4-13Q9D7P3 165 aa7,3□□□□□ -1,24
Cln6-201ENSMUST00000034776 2300003K06RikA2A4M0 262 aa7,26□□□□□ -1,25
Cln6-201ENSMUST00000034776 Sprr2kO70562 68 aa7,15□□□□□ -1,26
Cln6-201ENSMUST00000034776 Lce1fB9EJP6 147 aa7,06□□□□□ -1,28
Cln6-201ENSMUST00000034776 Lce1a1Q9CQH5 143 aa7,06□□□□□ -1,28
Cln6-201ENSMUST00000034776 Gm10100J3QK64 120 aa7,03□□□□□ -1,28
Cln6-201ENSMUST00000034776 Krtap4-7Q9D732 168 aa7,03□□□□□ -1,28
Cln6-201ENSMUST00000034776 Lce3cQ91V05 98 aa7□□□□□ -1,29
Cln6-201ENSMUST00000034776 Lce1kJ3QP15 125 aa6,94□□□□□ -1,3
Cln6-201ENSMUST00000034776 A0A1Y7VJH8 109 aa6,92□□□□□ -1,3
Cln6-201ENSMUST00000034776 Lce3eF8VQJ0 98 aa6,91□□□□□ -1,3
Cln6-201ENSMUST00000034776 Lce3fQ6PAI4 98 aa6,91□□□□□ -1,3
Cln6-201ENSMUST00000034776 Sprr2iO70560 76 aa6,89□□□□□ -1,31
Cln6-201ENSMUST00000034776 ObscnA2AAJ9 8891 aaKnown RBP6,88□□□□□ -1,31
Cln6-201ENSMUST00000034776 Lce3dE9Q8V1 98 aa6,88□□□□□ -1,31
Cln6-201ENSMUST00000034776 Gm10142J3KMP7 120 aa6,86□□□□□ -1,31
Cln6-201ENSMUST00000034776 Mt1P02802 61 aaKnown RBP6,83□□□□□ -1,32
Cln6-201ENSMUST00000034776 Krtap6-3A0A087WQL6 57 aa6,8□□□□□ -1,32
Cln6-201ENSMUST00000034776 Lce1lQ9D1G7 135 aa6,8□□□□□ -1,32
Cln6-201ENSMUST00000034776 Gm11568A2A4M2 211 aa6,73□□□□□ -1,33
Cln6-201ENSMUST00000034776 Krtap9-1Q64526 186 aa6,73□□□□□ -1,33
Cln6-201ENSMUST00000034776 Krtap5-2Q9D5Z7 189 aa6,72□□□□□ -1,33
Cln6-201ENSMUST00000034776 Krtap20-2E9Q0A8 60 aa6,71□□□□□ -1,34
Cln6-201ENSMUST00000034776 Sprr2hO70559 108 aa6,7□□□□□ -1,34
Cln6-201ENSMUST00000034776 Lce3aQ497I5 98 aa6,61□□□□□ -1,35
Cln6-201ENSMUST00000034776 Gm10153A0A1B0GRL1 320 aa6,38□□□□□ -1,39
Cln6-201ENSMUST00000034776 Sprr2eO70556 76 aa6,37□□□□□ -1,39
Cln6-201ENSMUST00000034776 Gm4553A0A1B0GSA9 284 aa6,2□□□□□ -1,42
Cln6-201ENSMUST00000034776 Gm11559Q9D3H7 191 aa6,16□□□□□ -1,42
Cln6-201ENSMUST00000034776 Gm45337A0A1B0GS71 263 aa6,14□□□□□ -1,43
Cln6-201ENSMUST00000034776 Macf1Q9QXZ0 7354 aaKnown RBP6,1□□□□□ -1,43
Cln6-201ENSMUST00000034776 Mt3P28184 68 aa6,09□□□□□ -1,43
Cln6-201ENSMUST00000034776 A0A1Y7VLE6 161 aa6,07□□□□□ -1,44
Cln6-201ENSMUST00000034776 Gm2431E9Q8S1 172 aa5,99□□□□□ -1,45
Cln6-201ENSMUST00000034776 Sprr2fO70557 76 aa5,98□□□□□ -1,45
Cln6-201ENSMUST00000034776 Krtap31-1Q9D644 177 aa5,97□□□□□ -1,45
Cln6-201ENSMUST00000034776 Gm40460A0A1B0GR10 244 aa5,96□□□□□ -1,45
Cln6-201ENSMUST00000034776 Gm7579A0A1B0GRJ4 243 aa5,96□□□□□ -1,45
Cln6-201ENSMUST00000034776 Krtap5-5Q2TA51 241 aa5,96□□□□□ -1,45
Cln6-201ENSMUST00000034776 Krtap5-4Q62220 223 aa5,96□□□□□ -1,45
Cln6-201ENSMUST00000034776 Hmcn1D3YXG0 5634 aa5,91□□□□□ -1,46
Cln6-201ENSMUST00000034776 Gm11554B1AQB2 190 aa5,9□□□□□ -1,47
Cln6-201ENSMUST00000034776 Gm10024A0A0A0MQA4 119 aa5,71□□□□□ -1,5
Cln6-201ENSMUST00000034776 Kmt2dQ6PDK2 5588 aa5,68□□□□□ -1,5
Cln6-201ENSMUST00000034776 A030005L19RikA0A1Y7VIU2 113 aa5,61□□□□□ -1,51
Cln6-201ENSMUST00000034776 Gm39115A0A1B0GSH7 232 aa5,55□□□□□ -1,52
Cln6-201ENSMUST00000034776 Krtap4-16Q91W93 202 aa5,54□□□□□ -1,52
Cln6-201ENSMUST00000034776 Krtap31-2Q8CAY5 177 aa5,43□□□□□ -1,54
Cln6-201ENSMUST00000034776 DstQ91ZU6 7393 aaKnown RBP5,25□□□□□ -1,57
Cln6-201ENSMUST00000034776 Muc16A0A140LJ72 8478 aa5,24□□□□□ -1,57
Cln6-201ENSMUST00000034776 Eppk1Q8R0W0 6548 aa5,19□□□□□ -1,58
Cln6-201ENSMUST00000034776 1110025L11RikO09048 78 aa5,17□□□□□ -1,58
Cln6-201ENSMUST00000034776 Krtap6-5Q925H3 78 aa5,17□□□□□ -1,58
Cln6-201ENSMUST00000034776 Muc19Q6PZE0 7524 aa5,16□□□□□ -1,58
Cln6-201ENSMUST00000034776 Gm11639A0A1D5RLM8 5808 aa5,09□□□□□ -1,59
Cln6-201ENSMUST00000034776 AhnakE9Q616 5656 aaKnown RBP4,93□□□□□ -1,62
Cln6-201ENSMUST00000034776 A0A1Y7VJ07 166 aa4,89□□□□□ -1,63
Cln6-201ENSMUST00000034776 Gm45618A0A1B0GSA0 219 aa4,83□□□□□ -1,64
Cln6-201ENSMUST00000034776 NebE9Q1W3 7152 aa4,65□□□□□ -1,66
Cln6-201ENSMUST00000034776 Sprr2bO70554 98 aa4,58□□□□□ -1,68
Cln6-201ENSMUST00000034776 Gm10229O08631 77 aa4,57□□□□□ -1,68
Cln6-201ENSMUST00000034776 Gm29735A0A1B0GT06 219 aa4,5□□□□□ -1,69
Cln6-201ENSMUST00000034776 Gpr98Q8VHN7 6298 aaKnown RBP4,5□□□□□ -1,69
Cln6-201ENSMUST00000034776 Gm11567Q9D141 195 aa4,46□□□□□ -1,69
Cln6-201ENSMUST00000034776 Krtap21-1Q925H4 128 aa4,25□□□□□ -1,73
Cln6-201ENSMUST00000034776 A0A286YCP9 139 aa4,06□□□□□ -1,76
Cln6-201ENSMUST00000034776 Phgr1Q8K0G7 91 aa3,96□□□□□ -1,78
Cln6-201ENSMUST00000034776 Krtap6-2O08884 159 aa3,9□□□□□ -1,79
Cln6-201ENSMUST00000034776 A030003K21RikA0A1Y7VIM3 128 aa2,92□□□□□ -1,94
Cln6-201ENSMUST00000034776 Krtap5-1Q64507 230 aa2,81□□□□□ -1,96
Cln6-201ENSMUST00000034776 Krtap28-10A0A1Y7VP58 119 aa2,78□□□□□ -1,96
Cln6-201ENSMUST00000034776 Krtap28-13A0A087WQP5 138 aa2,63□□□□□ -1,99
Cln6-201ENSMUST00000034776 Gm7544A0A1Y7VJ58 118 aa2,62□□□□□ -1,99
Cln6-201ENSMUST00000034776 Gm4559A4IF42 199 aa2,59□□□□□ -2
Cln6-201ENSMUST00000034776 A030005K14RikA0A1Y7VNY1 122 aa2,57□□□□□ -2
Cln6-201ENSMUST00000034776 Gm6217A0A1Y7VJK9 128 aa2,31□□□□□ -2,04
Cln6-201ENSMUST00000034776 A030014E15RikA0A1Y7VJV2 120 aa2,14□□□□□ -2,07
Retrieved 80 of 22,080 RNA–protein pairs in 40 ms