RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Lce1fB9EJP6 147 aa3.79□□□□□ -1.8
Pdlim5-201ENSMUST00000029941 Lce1cQ9D1C5 147 aa3.79□□□□□ -1.8
Pdlim5-201ENSMUST00000029941 Lce1lQ9D1G7 135 aa3.79□□□□□ -1.8
Pdlim5-201ENSMUST00000029941 A030005K14RikA0A1Y7VNY1 122 aa3.78□□□□□ -1.8
Pdlim5-201ENSMUST00000029941 Lce1bQ9D149 137 aa3.77□□□□□ -1.81
Pdlim5-201ENSMUST00000029941 Lce1gQ9D195 139 aa3.77□□□□□ -1.81
Pdlim5-201ENSMUST00000029941 Lce1eQ9D139 143 aa3.75□□□□□ -1.81
Pdlim5-201ENSMUST00000029941 A0A1Y7VJ07 166 aa3.74□□□□□ -1.81
Pdlim5-201ENSMUST00000029941 Krtap4-6Q3V4B7 195 aa3.73□□□□□ -1.81
Pdlim5-201ENSMUST00000029941 Gm10024A0A0A0MQA4 119 aa3.7□□□□□ -1.82
Pdlim5-201ENSMUST00000029941 Mt4P47945 62 aa3.69□□□□□ -1.82
Pdlim5-201ENSMUST00000029941 Sprr2hO70559 108 aa3.67□□□□□ -1.82
Pdlim5-201ENSMUST00000029941 Sprr2fO70557 76 aa3.63□□□□□ -1.83
Pdlim5-201ENSMUST00000029941 Krtap31-1Q9D644 177 aa3.63□□□□□ -1.83
Pdlim5-201ENSMUST00000029941 Krtap4-1Q3UUY3 169 aa3.62□□□□□ -1.83
Pdlim5-201ENSMUST00000029941 Gm7544A0A1Y7VJ58 118 aa3.61□□□□□ -1.83
Pdlim5-201ENSMUST00000029941 A030005L19RikA0A1Y7VIU2 113 aa3.6□□□□□ -1.83
Pdlim5-201ENSMUST00000029941 Krtap4-2B1AQ85 167 aa3.6□□□□□ -1.83
Pdlim5-201ENSMUST00000029941 Sprr2eO70556 76 aa3.57□□□□□ -1.84
Pdlim5-201ENSMUST00000029941 Lce1a1Q9CQH5 143 aa3.54□□□□□ -1.84
Pdlim5-201ENSMUST00000029941 Gm11564A2A4L9 201 aa3.51□□□□□ -1.85
Pdlim5-201ENSMUST00000029941 Gm11563B1AQ90 168 aa3.51□□□□□ -1.85
Pdlim5-201ENSMUST00000029941 Gm11595B1AQA7 289 aa3.51□□□□□ -1.85
Pdlim5-201ENSMUST00000029941 Krtap4-8B1AQA8 209 aa3.51□□□□□ -1.85
Pdlim5-201ENSMUST00000029941 Gm11596B1AQB0 205 aa3.5□□□□□ -1.85
Pdlim5-201ENSMUST00000029941 Krtap4-9B1AQA9 244 aa3.46□□□□□ -1.85
Pdlim5-201ENSMUST00000029941 2300003K06RikA2A4M0 262 aa3.46□□□□□ -1.86
Pdlim5-201ENSMUST00000029941 Lce1kJ3QP15 125 aa3.43□□□□□ -1.86
Pdlim5-201ENSMUST00000029941 A030014E15RikA0A1Y7VJV2 120 aa3.39□□□□□ -1.87
Pdlim5-201ENSMUST00000029941 Syne1Q6ZWR6 8799 aa3.39□□□□□ -1.87
Pdlim5-201ENSMUST00000029941 Krtap4-7Q9D732 168 aa3.37□□□□□ -1.87
Pdlim5-201ENSMUST00000029941 Krtap4-13Q9D7P3 165 aa3.36□□□□□ -1.87
Pdlim5-201ENSMUST00000029941 Fsip2A2ARZ3 6995 aa3.35□□□□□ -1.87
Pdlim5-201ENSMUST00000029941 Krtap4-16Q91W93 202 aa3.35□□□□□ -1.87
Pdlim5-201ENSMUST00000029941 Syne2Q6ZWQ0 6874 aaKnown RBP3.33□□□□□ -1.88
Pdlim5-201ENSMUST00000029941 Mt1P02802 61 aaKnown RBP3.3□□□□□ -1.88
Pdlim5-201ENSMUST00000029941 Mt3P28184 68 aa3.29□□□□□ -1.88
Pdlim5-201ENSMUST00000029941 ObscnA2AAJ9 8891 aaKnown RBP3.13□□□□□ -1.91
Pdlim5-201ENSMUST00000029941 Gm11555B1AQ89 175 aa3.12□□□□□ -1.91
Pdlim5-201ENSMUST00000029941 Krtap6-3A0A087WQL6 57 aa3.12□□□□□ -1.91
Pdlim5-201ENSMUST00000029941 Krtap20-2E9Q0A8 60 aa3.05□□□□□ -1.92
Pdlim5-201ENSMUST00000029941 Sprr2bO70554 98 aa2.91□□□□□ -1.94
Pdlim5-201ENSMUST00000029941 Gm11554B1AQB2 190 aa2.87□□□□□ -1.95
Pdlim5-201ENSMUST00000029941 A0A286YCP9 139 aa2.82□□□□□ -1.96
Pdlim5-201ENSMUST00000029941 Muc16A0A140LJ72 8478 aa2.82□□□□□ -1.96
Pdlim5-201ENSMUST00000029941 Gm11568A2A4M2 211 aa2.8□□□□□ -1.96
Pdlim5-201ENSMUST00000029941 Krtap9-1Q64526 186 aa2.8□□□□□ -1.96
Pdlim5-201ENSMUST00000029941 Macf1Q9QXZ0 7354 aaKnown RBP2.7□□□□□ -1.98
Pdlim5-201ENSMUST00000029941 1110025L11RikO09048 78 aa2.66□□□□□ -1.98
Pdlim5-201ENSMUST00000029941 Krtap6-5Q925H3 78 aa2.66□□□□□ -1.98
Pdlim5-201ENSMUST00000029941 Eppk1Q8R0W0 6548 aa2.61□□□□□ -1.99
Pdlim5-201ENSMUST00000029941 Krtap5-2Q9D5Z7 189 aa2.6□□□□□ -1.99
Pdlim5-201ENSMUST00000029941 Gm11559Q9D3H7 191 aa2.57□□□□□ -2
Pdlim5-201ENSMUST00000029941 Kmt2dQ6PDK2 5588 aa2.56□□□□□ -2
Pdlim5-201ENSMUST00000029941 DstQ91ZU6 7393 aaKnown RBP2.55□□□□□ -2
Pdlim5-201ENSMUST00000029941 Gm10229O08631 77 aa2.44□□□□□ -2.02
Pdlim5-201ENSMUST00000029941 Gm10153A0A1B0GRL1 320 aa2.41□□□□□ -2.02
Pdlim5-201ENSMUST00000029941 Hmcn1D3YXG0 5634 aa2.38□□□□□ -2.03
Pdlim5-201ENSMUST00000029941 Gm4553A0A1B0GSA9 284 aa2.38□□□□□ -2.03
Pdlim5-201ENSMUST00000029941 Muc19Q6PZE0 7524 aa2.35□□□□□ -2.03
Pdlim5-201ENSMUST00000029941 Krtap31-2Q8CAY5 177 aa2.33□□□□□ -2.04
Pdlim5-201ENSMUST00000029941 NebE9Q1W3 7152 aa2.28□□□□□ -2.04
Pdlim5-201ENSMUST00000029941 Gm2431E9Q8S1 172 aa2.27□□□□□ -2.05
Pdlim5-201ENSMUST00000029941 Phgr1Q8K0G7 91 aa2.26□□□□□ -2.05
Pdlim5-201ENSMUST00000029941 Gm45337A0A1B0GS71 263 aa2.25□□□□□ -2.05
Pdlim5-201ENSMUST00000029941 Gm11639A0A1D5RLM8 5808 aa2.23□□□□□ -2.05
Pdlim5-201ENSMUST00000029941 Gm40460A0A1B0GR10 244 aa2.21□□□□□ -2.06
Pdlim5-201ENSMUST00000029941 Gm7579A0A1B0GRJ4 243 aa2.21□□□□□ -2.06
Pdlim5-201ENSMUST00000029941 Krtap5-5Q2TA51 241 aa2.21□□□□□ -2.06
Pdlim5-201ENSMUST00000029941 Krtap5-4Q62220 223 aa2.21□□□□□ -2.06
Pdlim5-201ENSMUST00000029941 AhnakE9Q616 5656 aaKnown RBP2.09□□□□□ -2.08
Pdlim5-201ENSMUST00000029941 Gpr98Q8VHN7 6298 aaKnown RBP2.05□□□□□ -2.08
Pdlim5-201ENSMUST00000029941 Krtap21-1Q925H4 128 aa2.03□□□□□ -2.08
Pdlim5-201ENSMUST00000029941 Gm39115A0A1B0GSH7 232 aa1.99□□□□□ -2.09
Pdlim5-201ENSMUST00000029941 Krtap6-2O08884 159 aa1.98□□□□□ -2.09
Pdlim5-201ENSMUST00000029941 Gm11567Q9D141 195 aa1.83□□□□□ -2.12
Pdlim5-201ENSMUST00000029941 Gm45618A0A1B0GSA0 219 aa1.77□□□□□ -2.13
Pdlim5-201ENSMUST00000029941 Gm29735A0A1B0GT06 219 aa1.69□□□□□ -2.14
Pdlim5-201ENSMUST00000029941 Krtap5-1Q64507 230 aa1.31□□□□□ -2.2
Pdlim5-201ENSMUST00000029941 Gm4559A4IF42 199 aa1.08□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 103.7 ms