RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Gm11562A0PK51 136 aa6.16□□□□□ -1.42
Rpf1-201ENSMUST00000029838 Lce1eQ9D139 143 aa6.04□□□□□ -1.44
Rpf1-201ENSMUST00000029838 Gm11564A2A4L9 201 aa6.01□□□□□ -1.45
Rpf1-201ENSMUST00000029838 Gm11595B1AQA7 289 aa6.01□□□□□ -1.45
Rpf1-201ENSMUST00000029838 Krtap4-8B1AQA8 209 aa6.01□□□□□ -1.45
Rpf1-201ENSMUST00000029838 Lce1kJ3QP15 125 aa5.99□□□□□ -1.45
Rpf1-201ENSMUST00000029838 Syne2Q6ZWQ0 6874 aaKnown RBP5.95□□□□□ -1.46
Rpf1-201ENSMUST00000029838 Krtap4-9B1AQA9 244 aa5.94□□□□□ -1.46
Rpf1-201ENSMUST00000029838 Gm11559Q9D3H7 191 aa5.91□□□□□ -1.46
Rpf1-201ENSMUST00000029838 Gm10272F7CZ33 110 aa5.89□□□□□ -1.47
Rpf1-201ENSMUST00000029838 Lce1cQ9D1C5 147 aa5.88□□□□□ -1.47
Rpf1-201ENSMUST00000029838 Mt4P47945 62 aa5.86□□□□□ -1.47
Rpf1-201ENSMUST00000029838 Lce1fB9EJP6 147 aa5.81□□□□□ -1.48
Rpf1-201ENSMUST00000029838 Gm45618A0A1B0GSA0 219 aa5.78□□□□□ -1.48
Rpf1-201ENSMUST00000029838 Gm2431E9Q8S1 172 aa5.75□□□□□ -1.49
Rpf1-201ENSMUST00000029838 Gm11554B1AQB2 190 aa5.75□□□□□ -1.49
Rpf1-201ENSMUST00000029838 Krtap31-1Q9D644 177 aa5.72□□□□□ -1.49
Rpf1-201ENSMUST00000029838 Gm10100J3QK64 120 aa5.71□□□□□ -1.5
Rpf1-201ENSMUST00000029838 Gm11567Q9D141 195 aa5.7□□□□□ -1.5
Rpf1-201ENSMUST00000029838 Gm39115A0A1B0GSH7 232 aa5.68□□□□□ -1.5
Rpf1-201ENSMUST00000029838 Gm11938Q9D3H4 131 aa5.68□□□□□ -1.5
Rpf1-201ENSMUST00000029838 Sprr2kO70562 68 aa5.65□□□□□ -1.51
Rpf1-201ENSMUST00000029838 Krtap4-13Q9D7P3 165 aa5.62□□□□□ -1.51
Rpf1-201ENSMUST00000029838 Sprr2gO70558 76 aa5.6□□□□□ -1.51
Rpf1-201ENSMUST00000029838 Lce3bQ9CQM7 98 aa5.6□□□□□ -1.51
Rpf1-201ENSMUST00000029838 2300003K06RikA2A4M0 262 aa5.58□□□□□ -1.52
Rpf1-201ENSMUST00000029838 Sprr2dO70555 85 aa5.57□□□□□ -1.52
Rpf1-201ENSMUST00000029838 Gm9112A2AI92 75 aa5.56□□□□□ -1.52
Rpf1-201ENSMUST00000029838 Gm29735A0A1B0GT06 219 aa5.51□□□□□ -1.53
Rpf1-201ENSMUST00000029838 4933428G20RikQ9D3X4 101 aa5.47□□□□□ -1.53
Rpf1-201ENSMUST00000029838 Fsip2A2ARZ3 6995 aa5.45□□□□□ -1.54
Rpf1-201ENSMUST00000029838 Krtap19-4Q925H7 84 aa5.41□□□□□ -1.54
Rpf1-201ENSMUST00000029838 Krtap6-3A0A087WQL6 57 aa5.4□□□□□ -1.54
Rpf1-201ENSMUST00000029838 Syne1Q6ZWR6 8799 aa5.39□□□□□ -1.55
Rpf1-201ENSMUST00000029838 Sprr2iO70560 76 aa5.34□□□□□ -1.56
Rpf1-201ENSMUST00000029838 Lce3cQ91V05 98 aa5.26□□□□□ -1.57
Rpf1-201ENSMUST00000029838 Lce3dE9Q8V1 98 aa5.18□□□□□ -1.58
Rpf1-201ENSMUST00000029838 Lce3eF8VQJ0 98 aa5.15□□□□□ -1.58
Rpf1-201ENSMUST00000029838 Lce3fQ6PAI4 98 aa5.15□□□□□ -1.58
Rpf1-201ENSMUST00000029838 Krtap20-2E9Q0A8 60 aa5.12□□□□□ -1.59
Rpf1-201ENSMUST00000029838 Mt1P02802 61 aaKnown RBP5.12□□□□□ -1.59
Rpf1-201ENSMUST00000029838 Krtap5-2Q9D5Z7 189 aa5.12□□□□□ -1.59
Rpf1-201ENSMUST00000029838 Gm11568A2A4M2 211 aa5.04□□□□□ -1.6
Rpf1-201ENSMUST00000029838 Krtap9-1Q64526 186 aa5.04□□□□□ -1.6
Rpf1-201ENSMUST00000029838 Gm10142J3KMP7 120 aa5□□□□□ -1.61
Rpf1-201ENSMUST00000029838 Lce3aQ497I5 98 aa4.95□□□□□ -1.62
Rpf1-201ENSMUST00000029838 Gm10153A0A1B0GRL1 320 aa4.94□□□□□ -1.62
Rpf1-201ENSMUST00000029838 ObscnA2AAJ9 8891 aaKnown RBP4.88□□□□□ -1.63
Rpf1-201ENSMUST00000029838 Sprr2hO70559 108 aa4.82□□□□□ -1.64
Rpf1-201ENSMUST00000029838 Gm4553A0A1B0GSA9 284 aa4.77□□□□□ -1.65
Rpf1-201ENSMUST00000029838 Krtap5-4Q62220 223 aa4.72□□□□□ -1.65
Rpf1-201ENSMUST00000029838 Gm45337A0A1B0GS71 263 aa4.67□□□□□ -1.66
Rpf1-201ENSMUST00000029838 Mt3P28184 68 aa4.66□□□□□ -1.66
Rpf1-201ENSMUST00000029838 Sprr2eO70556 76 aa4.57□□□□□ -1.68
Rpf1-201ENSMUST00000029838 Gm40460A0A1B0GR10 244 aa4.55□□□□□ -1.68
Rpf1-201ENSMUST00000029838 Gm7579A0A1B0GRJ4 243 aa4.55□□□□□ -1.68
Rpf1-201ENSMUST00000029838 Krtap5-5Q2TA51 241 aa4.55□□□□□ -1.68
Rpf1-201ENSMUST00000029838 Macf1Q9QXZ0 7354 aaKnown RBP4.42□□□□□ -1.7
Rpf1-201ENSMUST00000029838 Hmcn1D3YXG0 5634 aa4.38□□□□□ -1.71
Rpf1-201ENSMUST00000029838 Kmt2dQ6PDK2 5588 aa4.38□□□□□ -1.71
Rpf1-201ENSMUST00000029838 Sprr2fO70557 76 aa4.29□□□□□ -1.72
Rpf1-201ENSMUST00000029838 Gm10024A0A0A0MQA4 119 aa4.25□□□□□ -1.73
Rpf1-201ENSMUST00000029838 Eppk1Q8R0W0 6548 aa4.1□□□□□ -1.75
Rpf1-201ENSMUST00000029838 DstQ91ZU6 7393 aaKnown RBP3.9□□□□□ -1.79
Rpf1-201ENSMUST00000029838 Krtap5-1Q64507 230 aa3.87□□□□□ -1.79
Rpf1-201ENSMUST00000029838 1110025L11RikO09048 78 aa3.86□□□□□ -1.79
Rpf1-201ENSMUST00000029838 Krtap6-5Q925H3 78 aa3.86□□□□□ -1.79
Rpf1-201ENSMUST00000029838 Krtap4-16Q91W93 202 aa3.84□□□□□ -1.79
Rpf1-201ENSMUST00000029838 Muc19Q6PZE0 7524 aa3.81□□□□□ -1.8
Rpf1-201ENSMUST00000029838 Gm11639A0A1D5RLM8 5808 aa3.8□□□□□ -1.8
Rpf1-201ENSMUST00000029838 Gm4559A4IF42 199 aa3.75□□□□□ -1.81
Rpf1-201ENSMUST00000029838 AhnakE9Q616 5656 aaKnown RBP3.75□□□□□ -1.81
Rpf1-201ENSMUST00000029838 Gpr98Q8VHN7 6298 aaKnown RBP3.51□□□□□ -1.85
Rpf1-201ENSMUST00000029838 NebE9Q1W3 7152 aa3.49□□□□□ -1.85
Rpf1-201ENSMUST00000029838 Muc16A0A140LJ72 8478 aa3.48□□□□□ -1.85
Rpf1-201ENSMUST00000029838 Sprr2bO70554 98 aa3.47□□□□□ -1.85
Rpf1-201ENSMUST00000029838 Gm10229O08631 77 aa3.43□□□□□ -1.86
Rpf1-201ENSMUST00000029838 Krtap21-1Q925H4 128 aa3.14□□□□□ -1.91
Rpf1-201ENSMUST00000029838 Krtap6-2O08884 159 aa2.94□□□□□ -1.94
Rpf1-201ENSMUST00000029838 Phgr1Q8K0G7 91 aa2.85□□□□□ -1.95
Retrieved 80 of 22,080 RNA–protein pairs in 71.4 ms