RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 Gm11596B1AQB0 205 aa6.11□□□□□ -1.43
Shox2-201ENSMUST00000029422 Mt4P47945 62 aa6.06□□□□□ -1.44
Shox2-201ENSMUST00000029422 Lce3eF8VQJ0 98 aa6.05□□□□□ -1.44
Shox2-201ENSMUST00000029422 Lce3fQ6PAI4 98 aa6.05□□□□□ -1.44
Shox2-201ENSMUST00000029422 Gm11555B1AQ89 175 aa6.04□□□□□ -1.44
Shox2-201ENSMUST00000029422 Gm38119A0A0A6YX29 146 aa6.03□□□□□ -1.44
Shox2-201ENSMUST00000029422 Gm11564A2A4L9 201 aa6.02□□□□□ -1.44
Shox2-201ENSMUST00000029422 Gm11563B1AQ90 168 aa6.02□□□□□ -1.44
Shox2-201ENSMUST00000029422 Gm11595B1AQA7 289 aa6.02□□□□□ -1.44
Shox2-201ENSMUST00000029422 Krtap4-8B1AQA8 209 aa6.02□□□□□ -1.44
Shox2-201ENSMUST00000029422 Sprr2hO70559 108 aa6.02□□□□□ -1.44
Shox2-201ENSMUST00000029422 Lce3aQ497I5 98 aa5.97□□□□□ -1.45
Shox2-201ENSMUST00000029422 ObscnA2AAJ9 8891 aaKnown RBP5.97□□□□□ -1.45
Shox2-201ENSMUST00000029422 Krtap4-9B1AQA9 244 aa5.95□□□□□ -1.46
Shox2-201ENSMUST00000029422 Krtap31-1Q9D644 177 aa5.92□□□□□ -1.46
Shox2-201ENSMUST00000029422 Sprr2fO70557 76 aa5.87□□□□□ -1.47
Shox2-201ENSMUST00000029422 Sprr2eO70556 76 aa5.85□□□□□ -1.47
Shox2-201ENSMUST00000029422 Krtap4-16Q91W93 202 aa5.84□□□□□ -1.47
Shox2-201ENSMUST00000029422 Krtap4-13Q9D7P3 165 aa5.8□□□□□ -1.48
Shox2-201ENSMUST00000029422 2300003K06RikA2A4M0 262 aa5.78□□□□□ -1.48
Shox2-201ENSMUST00000029422 Muc16A0A140LJ72 8478 aa5.75□□□□□ -1.49
Shox2-201ENSMUST00000029422 Sprr2kO70562 68 aa5.73□□□□□ -1.49
Shox2-201ENSMUST00000029422 A0A1Y7VJH8 109 aa5.68□□□□□ -1.5
Shox2-201ENSMUST00000029422 Krtap31-2Q8CAY5 177 aa5.59□□□□□ -1.51
Shox2-201ENSMUST00000029422 Lce1bQ9D149 137 aa5.52□□□□□ -1.53
Shox2-201ENSMUST00000029422 Krtap4-7Q9D732 168 aa5.49□□□□□ -1.53
Shox2-201ENSMUST00000029422 Lce1lQ9D1G7 135 aa5.45□□□□□ -1.54
Shox2-201ENSMUST00000029422 Macf1Q9QXZ0 7354 aaKnown RBP5.44□□□□□ -1.54
Shox2-201ENSMUST00000029422 Krtap28-10A0A1Y7VP58 119 aa5.42□□□□□ -1.54
Shox2-201ENSMUST00000029422 Lce1kJ3QP15 125 aa5.39□□□□□ -1.55
Shox2-201ENSMUST00000029422 Mt1P02802 61 aaKnown RBP5.32□□□□□ -1.56
Shox2-201ENSMUST00000029422 A0A1Y7VLE6 161 aa5.3□□□□□ -1.56
Shox2-201ENSMUST00000029422 Krtap28-13A0A087WQP5 138 aa5.22□□□□□ -1.57
Shox2-201ENSMUST00000029422 Krtap20-2E9Q0A8 60 aa5.21□□□□□ -1.58
Shox2-201ENSMUST00000029422 Gm10024A0A0A0MQA4 119 aa5.17□□□□□ -1.58
Shox2-201ENSMUST00000029422 A030005K14RikA0A1Y7VNY1 122 aa5.09□□□□□ -1.6
Shox2-201ENSMUST00000029422 Krtap6-3A0A087WQL6 57 aa5.01□□□□□ -1.61
Shox2-201ENSMUST00000029422 Gm11568A2A4M2 211 aa5.01□□□□□ -1.61
Shox2-201ENSMUST00000029422 Krtap9-1Q64526 186 aa5.01□□□□□ -1.61
Shox2-201ENSMUST00000029422 A030005L19RikA0A1Y7VIU2 113 aa4.99□□□□□ -1.61
Shox2-201ENSMUST00000029422 Kmt2dQ6PDK2 5588 aa4.91□□□□□ -1.62
Shox2-201ENSMUST00000029422 Gm11554B1AQB2 190 aa4.8□□□□□ -1.64
Shox2-201ENSMUST00000029422 Hmcn1D3YXG0 5634 aa4.78□□□□□ -1.64
Shox2-201ENSMUST00000029422 Gm7544A0A1Y7VJ58 118 aa4.75□□□□□ -1.65
Shox2-201ENSMUST00000029422 Krtap5-2Q9D5Z7 189 aa4.73□□□□□ -1.65
Shox2-201ENSMUST00000029422 Muc19Q6PZE0 7524 aa4.7□□□□□ -1.66
Shox2-201ENSMUST00000029422 Mt3P28184 68 aa4.63□□□□□ -1.67
Shox2-201ENSMUST00000029422 A0A1Y7VJ07 166 aa4.58□□□□□ -1.68
Shox2-201ENSMUST00000029422 Gm11559Q9D3H7 191 aa4.51□□□□□ -1.69
Shox2-201ENSMUST00000029422 Gm10153A0A1B0GRL1 320 aa4.49□□□□□ -1.69
Shox2-201ENSMUST00000029422 DstQ91ZU6 7393 aaKnown RBP4.46□□□□□ -1.7
Shox2-201ENSMUST00000029422 A030014E15RikA0A1Y7VJV2 120 aa4.39□□□□□ -1.71
Shox2-201ENSMUST00000029422 Gm2431E9Q8S1 172 aa4.35□□□□□ -1.71
Shox2-201ENSMUST00000029422 Gm4553A0A1B0GSA9 284 aa4.35□□□□□ -1.71
Shox2-201ENSMUST00000029422 NebE9Q1W3 7152 aa4.32□□□□□ -1.72
Shox2-201ENSMUST00000029422 A030003K21RikA0A1Y7VIM3 128 aa4.26□□□□□ -1.73
Shox2-201ENSMUST00000029422 Gm45337A0A1B0GS71 263 aa4.23□□□□□ -1.73
Shox2-201ENSMUST00000029422 Gm11639A0A1D5RLM8 5808 aa4.22□□□□□ -1.73
Shox2-201ENSMUST00000029422 Eppk1Q8R0W0 6548 aa4.16□□□□□ -1.74
Shox2-201ENSMUST00000029422 1110025L11RikO09048 78 aa4.15□□□□□ -1.74
Shox2-201ENSMUST00000029422 Krtap6-5Q925H3 78 aa4.15□□□□□ -1.74
Shox2-201ENSMUST00000029422 Gm40460A0A1B0GR10 244 aa4.05□□□□□ -1.76
Shox2-201ENSMUST00000029422 Gm7579A0A1B0GRJ4 243 aa4.05□□□□□ -1.76
Shox2-201ENSMUST00000029422 Krtap5-5Q2TA51 241 aa4.05□□□□□ -1.76
Shox2-201ENSMUST00000029422 Krtap5-4Q62220 223 aa4.05□□□□□ -1.76
Shox2-201ENSMUST00000029422 Gm6217A0A1Y7VJK9 128 aa4.04□□□□□ -1.76
Shox2-201ENSMUST00000029422 A0A286YCP9 139 aa3.93□□□□□ -1.78
Shox2-201ENSMUST00000029422 AhnakE9Q616 5656 aaKnown RBP3.8□□□□□ -1.8
Shox2-201ENSMUST00000029422 Gm39115A0A1B0GSH7 232 aa3.79□□□□□ -1.8
Shox2-201ENSMUST00000029422 Sprr2bO70554 98 aa3.78□□□□□ -1.8
Shox2-201ENSMUST00000029422 Gpr98Q8VHN7 6298 aaKnown RBP3.72□□□□□ -1.81
Shox2-201ENSMUST00000029422 Gm10229O08631 77 aa3.67□□□□□ -1.82
Shox2-201ENSMUST00000029422 Phgr1Q8K0G7 91 aa3.61□□□□□ -1.83
Shox2-201ENSMUST00000029422 Krtap21-1Q925H4 128 aa3.41□□□□□ -1.86
Shox2-201ENSMUST00000029422 Gm11567Q9D141 195 aa3.39□□□□□ -1.87
Shox2-201ENSMUST00000029422 Gm45618A0A1B0GSA0 219 aa3.23□□□□□ -1.89
Shox2-201ENSMUST00000029422 Krtap6-2O08884 159 aa3.04□□□□□ -1.92
Shox2-201ENSMUST00000029422 Gm29735A0A1B0GT06 219 aa3.01□□□□□ -1.93
Shox2-201ENSMUST00000029422 Krtap5-1Q64507 230 aa2.12□□□□□ -2.07
Shox2-201ENSMUST00000029422 Gm4559A4IF42 199 aa2.09□□□□□ -2.07
Retrieved 80 of 22,080 RNA–protein pairs in 31.6 ms