RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Gm38119A0A0A6YX29 146 aa7.36□□□□□ -1.23
Ptx3-201ENSMUST00000029421 Fsip2A2ARZ3 6995 aa7.3□□□□□ -1.24
Ptx3-201ENSMUST00000029421 Krtap28-13A0A087WQP5 138 aa7.26□□□□□ -1.25
Ptx3-201ENSMUST00000029421 Krtap19-4Q925H7 84 aa7.26□□□□□ -1.25
Ptx3-201ENSMUST00000029421 Krtap4-13Q9D7P3 165 aa7.24□□□□□ -1.25
Ptx3-201ENSMUST00000029421 A030005L19RikA0A1Y7VIU2 113 aa7.19□□□□□ -1.26
Ptx3-201ENSMUST00000029421 2300003K06RikA2A4M0 262 aa7.17□□□□□ -1.26
Ptx3-201ENSMUST00000029421 Syne1Q6ZWR6 8799 aa7.17□□□□□ -1.26
Ptx3-201ENSMUST00000029421 Sprr2kO70562 68 aa7.11□□□□□ -1.27
Ptx3-201ENSMUST00000029421 Lce3bQ9CQM7 98 aa7.11□□□□□ -1.27
Ptx3-201ENSMUST00000029421 Gm7544A0A1Y7VJ58 118 aa7.09□□□□□ -1.27
Ptx3-201ENSMUST00000029421 A030005K14RikA0A1Y7VNY1 122 aa7.07□□□□□ -1.28
Ptx3-201ENSMUST00000029421 Lce1cQ9D1C5 147 aa7.07□□□□□ -1.28
Ptx3-201ENSMUST00000029421 Gm10100J3QK64 120 aa7.05□□□□□ -1.28
Ptx3-201ENSMUST00000029421 Krtap6-3A0A087WQL6 57 aa6.98□□□□□ -1.29
Ptx3-201ENSMUST00000029421 Krtap4-7Q9D732 168 aa6.96□□□□□ -1.3
Ptx3-201ENSMUST00000029421 Gm10142J3KMP7 120 aa6.95□□□□□ -1.3
Ptx3-201ENSMUST00000029421 Sprr2iO70560 76 aa6.9□□□□□ -1.31
Ptx3-201ENSMUST00000029421 Lce1fB9EJP6 147 aa6.81□□□□□ -1.32
Ptx3-201ENSMUST00000029421 Lce1a1Q9CQH5 143 aa6.81□□□□□ -1.32
Ptx3-201ENSMUST00000029421 Lce1lQ9D1G7 135 aa6.81□□□□□ -1.32
Ptx3-201ENSMUST00000029421 Lce1kJ3QP15 125 aa6.76□□□□□ -1.33
Ptx3-201ENSMUST00000029421 Sprr2hO70559 108 aa6.73□□□□□ -1.33
Ptx3-201ENSMUST00000029421 Sprr2eO70556 76 aa6.7□□□□□ -1.34
Ptx3-201ENSMUST00000029421 Lce3cQ91V05 98 aa6.7□□□□□ -1.34
Ptx3-201ENSMUST00000029421 Lce3dE9Q8V1 98 aa6.66□□□□□ -1.34
Ptx3-201ENSMUST00000029421 Krtap20-2E9Q0A8 60 aa6.6□□□□□ -1.35
Ptx3-201ENSMUST00000029421 Lce3eF8VQJ0 98 aa6.57□□□□□ -1.36
Ptx3-201ENSMUST00000029421 Lce3fQ6PAI4 98 aa6.57□□□□□ -1.36
Ptx3-201ENSMUST00000029421 Sprr2fO70557 76 aa6.56□□□□□ -1.36
Ptx3-201ENSMUST00000029421 Mt1P02802 61 aaKnown RBP6.56□□□□□ -1.36
Ptx3-201ENSMUST00000029421 Krtap5-2Q9D5Z7 189 aa6.56□□□□□ -1.36
Ptx3-201ENSMUST00000029421 Gm11568A2A4M2 211 aa6.54□□□□□ -1.36
Ptx3-201ENSMUST00000029421 Krtap9-1Q64526 186 aa6.54□□□□□ -1.36
Ptx3-201ENSMUST00000029421 ObscnA2AAJ9 8891 aaKnown RBP6.46□□□□□ -1.37
Ptx3-201ENSMUST00000029421 Lce3aQ497I5 98 aa6.43□□□□□ -1.38
Ptx3-201ENSMUST00000029421 A0A1Y7VJ07 166 aa6.34□□□□□ -1.39
Ptx3-201ENSMUST00000029421 A030003K21RikA0A1Y7VIM3 128 aa6.28□□□□□ -1.4
Ptx3-201ENSMUST00000029421 Krtap31-1Q9D644 177 aa6.27□□□□□ -1.41
Ptx3-201ENSMUST00000029421 Gm10153A0A1B0GRL1 320 aa6.17□□□□□ -1.42
Ptx3-201ENSMUST00000029421 A030014E15RikA0A1Y7VJV2 120 aa6.11□□□□□ -1.43
Ptx3-201ENSMUST00000029421 Gm4553A0A1B0GSA9 284 aa6.09□□□□□ -1.43
Ptx3-201ENSMUST00000029421 Gm11559Q9D3H7 191 aa6.09□□□□□ -1.43
Ptx3-201ENSMUST00000029421 A0A286YCP9 139 aa6.07□□□□□ -1.44
Ptx3-201ENSMUST00000029421 Gm6217A0A1Y7VJK9 128 aa6.02□□□□□ -1.44
Ptx3-201ENSMUST00000029421 Gm45337A0A1B0GS71 263 aa6□□□□□ -1.45
Ptx3-201ENSMUST00000029421 Macf1Q9QXZ0 7354 aaKnown RBP5.97□□□□□ -1.45
Ptx3-201ENSMUST00000029421 Gm2431E9Q8S1 172 aa5.9□□□□□ -1.46
Ptx3-201ENSMUST00000029421 Mt3P28184 68 aa5.9□□□□□ -1.47
Ptx3-201ENSMUST00000029421 Gm11554B1AQB2 190 aa5.88□□□□□ -1.47
Ptx3-201ENSMUST00000029421 Gm40460A0A1B0GR10 244 aa5.83□□□□□ -1.48
Ptx3-201ENSMUST00000029421 Gm7579A0A1B0GRJ4 243 aa5.83□□□□□ -1.48
Ptx3-201ENSMUST00000029421 Krtap5-5Q2TA51 241 aa5.83□□□□□ -1.48
Ptx3-201ENSMUST00000029421 Krtap5-4Q62220 223 aa5.83□□□□□ -1.48
Ptx3-201ENSMUST00000029421 Hmcn1D3YXG0 5634 aa5.78□□□□□ -1.48
Ptx3-201ENSMUST00000029421 Krtap4-16Q91W93 202 aa5.77□□□□□ -1.49
Ptx3-201ENSMUST00000029421 Kmt2dQ6PDK2 5588 aa5.75□□□□□ -1.49
Ptx3-201ENSMUST00000029421 Gm10024A0A0A0MQA4 119 aa5.65□□□□□ -1.5
Ptx3-201ENSMUST00000029421 Eppk1Q8R0W0 6548 aa5.64□□□□□ -1.51
Ptx3-201ENSMUST00000029421 Gm39115A0A1B0GSH7 232 aa5.47□□□□□ -1.53
Ptx3-201ENSMUST00000029421 Gm11639A0A1D5RLM8 5808 aa5.31□□□□□ -1.56
Ptx3-201ENSMUST00000029421 Muc19Q6PZE0 7524 aa5.26□□□□□ -1.57
Ptx3-201ENSMUST00000029421 DstQ91ZU6 7393 aaKnown RBP5.22□□□□□ -1.57
Ptx3-201ENSMUST00000029421 1110025L11RikO09048 78 aa4.92□□□□□ -1.62
Ptx3-201ENSMUST00000029421 Krtap6-5Q925H3 78 aa4.92□□□□□ -1.62
Ptx3-201ENSMUST00000029421 AhnakE9Q616 5656 aaKnown RBP4.92□□□□□ -1.62
Ptx3-201ENSMUST00000029421 Gm45618A0A1B0GSA0 219 aa4.91□□□□□ -1.62
Ptx3-201ENSMUST00000029421 Gpr98Q8VHN7 6298 aaKnown RBP4.9□□□□□ -1.62
Ptx3-201ENSMUST00000029421 NebE9Q1W3 7152 aa4.83□□□□□ -1.64
Ptx3-201ENSMUST00000029421 Muc16A0A140LJ72 8478 aa4.82□□□□□ -1.64
Ptx3-201ENSMUST00000029421 Sprr2bO70554 98 aa4.73□□□□□ -1.65
Ptx3-201ENSMUST00000029421 Gm29735A0A1B0GT06 219 aa4.37□□□□□ -1.71
Ptx3-201ENSMUST00000029421 Gm10229O08631 77 aa4.37□□□□□ -1.71
Ptx3-201ENSMUST00000029421 Gm11567Q9D141 195 aa4.32□□□□□ -1.72
Ptx3-201ENSMUST00000029421 Krtap31-2Q8CAY5 177 aa4.24□□□□□ -1.73
Ptx3-201ENSMUST00000029421 Krtap21-1Q925H4 128 aa4.04□□□□□ -1.76
Ptx3-201ENSMUST00000029421 Phgr1Q8K0G7 91 aa3.96□□□□□ -1.78
Ptx3-201ENSMUST00000029421 Krtap6-2O08884 159 aa3.75□□□□□ -1.81
Ptx3-201ENSMUST00000029421 Krtap5-1Q64507 230 aa3.07□□□□□ -1.92
Ptx3-201ENSMUST00000029421 Gm4559A4IF42 199 aa2.98□□□□□ -1.93
Retrieved 80 of 22,080 RNA–protein pairs in 12.6 ms