RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Gm38119A0A0A6YX29 146 aa7,36□□□□□ -1,23
Ptx3-201ENSMUST00000029421 Fsip2A2ARZ3 6995 aa7,3□□□□□ -1,24
Ptx3-201ENSMUST00000029421 Krtap28-13A0A087WQP5 138 aa7,26□□□□□ -1,25
Ptx3-201ENSMUST00000029421 Krtap19-4Q925H7 84 aa7,26□□□□□ -1,25
Ptx3-201ENSMUST00000029421 Krtap4-13Q9D7P3 165 aa7,24□□□□□ -1,25
Ptx3-201ENSMUST00000029421 A030005L19RikA0A1Y7VIU2 113 aa7,19□□□□□ -1,26
Ptx3-201ENSMUST00000029421 2300003K06RikA2A4M0 262 aa7,17□□□□□ -1,26
Ptx3-201ENSMUST00000029421 Syne1Q6ZWR6 8799 aa7,17□□□□□ -1,26
Ptx3-201ENSMUST00000029421 Sprr2kO70562 68 aa7,11□□□□□ -1,27
Ptx3-201ENSMUST00000029421 Lce3bQ9CQM7 98 aa7,11□□□□□ -1,27
Ptx3-201ENSMUST00000029421 Gm7544A0A1Y7VJ58 118 aa7,09□□□□□ -1,27
Ptx3-201ENSMUST00000029421 A030005K14RikA0A1Y7VNY1 122 aa7,07□□□□□ -1,28
Ptx3-201ENSMUST00000029421 Lce1cQ9D1C5 147 aa7,07□□□□□ -1,28
Ptx3-201ENSMUST00000029421 Gm10100J3QK64 120 aa7,05□□□□□ -1,28
Ptx3-201ENSMUST00000029421 Krtap6-3A0A087WQL6 57 aa6,98□□□□□ -1,29
Ptx3-201ENSMUST00000029421 Krtap4-7Q9D732 168 aa6,96□□□□□ -1,3
Ptx3-201ENSMUST00000029421 Gm10142J3KMP7 120 aa6,95□□□□□ -1,3
Ptx3-201ENSMUST00000029421 Sprr2iO70560 76 aa6,9□□□□□ -1,31
Ptx3-201ENSMUST00000029421 Lce1fB9EJP6 147 aa6,81□□□□□ -1,32
Ptx3-201ENSMUST00000029421 Lce1a1Q9CQH5 143 aa6,81□□□□□ -1,32
Ptx3-201ENSMUST00000029421 Lce1lQ9D1G7 135 aa6,81□□□□□ -1,32
Ptx3-201ENSMUST00000029421 Lce1kJ3QP15 125 aa6,76□□□□□ -1,33
Ptx3-201ENSMUST00000029421 Sprr2hO70559 108 aa6,73□□□□□ -1,33
Ptx3-201ENSMUST00000029421 Sprr2eO70556 76 aa6,7□□□□□ -1,34
Ptx3-201ENSMUST00000029421 Lce3cQ91V05 98 aa6,7□□□□□ -1,34
Ptx3-201ENSMUST00000029421 Lce3dE9Q8V1 98 aa6,66□□□□□ -1,34
Ptx3-201ENSMUST00000029421 Krtap20-2E9Q0A8 60 aa6,6□□□□□ -1,35
Ptx3-201ENSMUST00000029421 Lce3eF8VQJ0 98 aa6,57□□□□□ -1,36
Ptx3-201ENSMUST00000029421 Lce3fQ6PAI4 98 aa6,57□□□□□ -1,36
Ptx3-201ENSMUST00000029421 Sprr2fO70557 76 aa6,56□□□□□ -1,36
Ptx3-201ENSMUST00000029421 Mt1P02802 61 aaKnown RBP6,56□□□□□ -1,36
Ptx3-201ENSMUST00000029421 Krtap5-2Q9D5Z7 189 aa6,56□□□□□ -1,36
Ptx3-201ENSMUST00000029421 Gm11568A2A4M2 211 aa6,54□□□□□ -1,36
Ptx3-201ENSMUST00000029421 Krtap9-1Q64526 186 aa6,54□□□□□ -1,36
Ptx3-201ENSMUST00000029421 ObscnA2AAJ9 8891 aaKnown RBP6,46□□□□□ -1,37
Ptx3-201ENSMUST00000029421 Lce3aQ497I5 98 aa6,43□□□□□ -1,38
Ptx3-201ENSMUST00000029421 A0A1Y7VJ07 166 aa6,34□□□□□ -1,39
Ptx3-201ENSMUST00000029421 A030003K21RikA0A1Y7VIM3 128 aa6,28□□□□□ -1,4
Ptx3-201ENSMUST00000029421 Krtap31-1Q9D644 177 aa6,27□□□□□ -1,41
Ptx3-201ENSMUST00000029421 Gm10153A0A1B0GRL1 320 aa6,17□□□□□ -1,42
Ptx3-201ENSMUST00000029421 A030014E15RikA0A1Y7VJV2 120 aa6,11□□□□□ -1,43
Ptx3-201ENSMUST00000029421 Gm4553A0A1B0GSA9 284 aa6,09□□□□□ -1,43
Ptx3-201ENSMUST00000029421 Gm11559Q9D3H7 191 aa6,09□□□□□ -1,43
Ptx3-201ENSMUST00000029421 A0A286YCP9 139 aa6,07□□□□□ -1,44
Ptx3-201ENSMUST00000029421 Gm6217A0A1Y7VJK9 128 aa6,02□□□□□ -1,44
Ptx3-201ENSMUST00000029421 Gm45337A0A1B0GS71 263 aa6□□□□□ -1,45
Ptx3-201ENSMUST00000029421 Macf1Q9QXZ0 7354 aaKnown RBP5,97□□□□□ -1,45
Ptx3-201ENSMUST00000029421 Gm2431E9Q8S1 172 aa5,9□□□□□ -1,46
Ptx3-201ENSMUST00000029421 Mt3P28184 68 aa5,9□□□□□ -1,47
Ptx3-201ENSMUST00000029421 Gm11554B1AQB2 190 aa5,88□□□□□ -1,47
Ptx3-201ENSMUST00000029421 Gm40460A0A1B0GR10 244 aa5,83□□□□□ -1,48
Ptx3-201ENSMUST00000029421 Gm7579A0A1B0GRJ4 243 aa5,83□□□□□ -1,48
Ptx3-201ENSMUST00000029421 Krtap5-5Q2TA51 241 aa5,83□□□□□ -1,48
Ptx3-201ENSMUST00000029421 Krtap5-4Q62220 223 aa5,83□□□□□ -1,48
Ptx3-201ENSMUST00000029421 Hmcn1D3YXG0 5634 aa5,78□□□□□ -1,48
Ptx3-201ENSMUST00000029421 Krtap4-16Q91W93 202 aa5,77□□□□□ -1,49
Ptx3-201ENSMUST00000029421 Kmt2dQ6PDK2 5588 aa5,75□□□□□ -1,49
Ptx3-201ENSMUST00000029421 Gm10024A0A0A0MQA4 119 aa5,65□□□□□ -1,5
Ptx3-201ENSMUST00000029421 Eppk1Q8R0W0 6548 aa5,64□□□□□ -1,51
Ptx3-201ENSMUST00000029421 Gm39115A0A1B0GSH7 232 aa5,47□□□□□ -1,53
Ptx3-201ENSMUST00000029421 Gm11639A0A1D5RLM8 5808 aa5,31□□□□□ -1,56
Ptx3-201ENSMUST00000029421 Muc19Q6PZE0 7524 aa5,26□□□□□ -1,57
Ptx3-201ENSMUST00000029421 DstQ91ZU6 7393 aaKnown RBP5,22□□□□□ -1,57
Ptx3-201ENSMUST00000029421 1110025L11RikO09048 78 aa4,92□□□□□ -1,62
Ptx3-201ENSMUST00000029421 Krtap6-5Q925H3 78 aa4,92□□□□□ -1,62
Ptx3-201ENSMUST00000029421 AhnakE9Q616 5656 aaKnown RBP4,92□□□□□ -1,62
Ptx3-201ENSMUST00000029421 Gm45618A0A1B0GSA0 219 aa4,91□□□□□ -1,62
Ptx3-201ENSMUST00000029421 Gpr98Q8VHN7 6298 aaKnown RBP4,9□□□□□ -1,62
Ptx3-201ENSMUST00000029421 NebE9Q1W3 7152 aa4,83□□□□□ -1,64
Ptx3-201ENSMUST00000029421 Muc16A0A140LJ72 8478 aa4,82□□□□□ -1,64
Ptx3-201ENSMUST00000029421 Sprr2bO70554 98 aa4,73□□□□□ -1,65
Ptx3-201ENSMUST00000029421 Gm29735A0A1B0GT06 219 aa4,37□□□□□ -1,71
Ptx3-201ENSMUST00000029421 Gm10229O08631 77 aa4,37□□□□□ -1,71
Ptx3-201ENSMUST00000029421 Gm11567Q9D141 195 aa4,32□□□□□ -1,72
Ptx3-201ENSMUST00000029421 Krtap31-2Q8CAY5 177 aa4,24□□□□□ -1,73
Ptx3-201ENSMUST00000029421 Krtap21-1Q925H4 128 aa4,04□□□□□ -1,76
Ptx3-201ENSMUST00000029421 Phgr1Q8K0G7 91 aa3,96□□□□□ -1,78
Ptx3-201ENSMUST00000029421 Krtap6-2O08884 159 aa3,75□□□□□ -1,81
Ptx3-201ENSMUST00000029421 Krtap5-1Q64507 230 aa3,07□□□□□ -1,92
Ptx3-201ENSMUST00000029421 Gm4559A4IF42 199 aa2,98□□□□□ -1,93
Retrieved 80 of 22,080 RNA–protein pairs in 36,9 ms