RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 ObscnA2AAJ9 8891 aaKnown RBP5.51□□□□□ -1.53
Ptpra-201ENSMUST00000028769 Krtap19-4Q925H7 84 aa5.5□□□□□ -1.53
Ptpra-201ENSMUST00000028769 Lce3eF8VQJ0 98 aa5.5□□□□□ -1.53
Ptpra-201ENSMUST00000028769 Lce3fQ6PAI4 98 aa5.5□□□□□ -1.53
Ptpra-201ENSMUST00000028769 Krtap31-2Q8CAY5 177 aa5.49□□□□□ -1.53
Ptpra-201ENSMUST00000028769 Lce1gQ9D195 139 aa5.42□□□□□ -1.54
Ptpra-201ENSMUST00000028769 Gm11555B1AQ89 175 aa5.41□□□□□ -1.54
Ptpra-201ENSMUST00000028769 Krtap4-2B1AQ85 167 aa5.4□□□□□ -1.55
Ptpra-201ENSMUST00000028769 Gm11564A2A4L9 201 aa5.37□□□□□ -1.55
Ptpra-201ENSMUST00000028769 Gm11563B1AQ90 168 aa5.37□□□□□ -1.55
Ptpra-201ENSMUST00000028769 Gm11595B1AQA7 289 aa5.37□□□□□ -1.55
Ptpra-201ENSMUST00000028769 Krtap4-8B1AQA8 209 aa5.37□□□□□ -1.55
Ptpra-201ENSMUST00000028769 Krtap4-9B1AQA9 244 aa5.35□□□□□ -1.55
Ptpra-201ENSMUST00000028769 Gm11596B1AQB0 205 aa5.32□□□□□ -1.56
Ptpra-201ENSMUST00000028769 Lce3aQ497I5 98 aa5.27□□□□□ -1.57
Ptpra-201ENSMUST00000028769 Sprr2hO70559 108 aa5.26□□□□□ -1.57
Ptpra-201ENSMUST00000028769 Sprr2kO70562 68 aa5.25□□□□□ -1.57
Ptpra-201ENSMUST00000028769 Macf1Q9QXZ0 7354 aaKnown RBP5.23□□□□□ -1.57
Ptpra-201ENSMUST00000028769 Krtap4-13Q9D7P3 165 aa5.23□□□□□ -1.57
Ptpra-201ENSMUST00000028769 Lce1bQ9D149 137 aa5.21□□□□□ -1.58
Ptpra-201ENSMUST00000028769 2300003K06RikA2A4M0 262 aa5.21□□□□□ -1.58
Ptpra-201ENSMUST00000028769 Lce1lQ9D1G7 135 aa5.16□□□□□ -1.58
Ptpra-201ENSMUST00000028769 Lce1kJ3QP15 125 aa5.14□□□□□ -1.59
Ptpra-201ENSMUST00000028769 A0A1Y7VJH8 109 aa5.14□□□□□ -1.59
Ptpra-201ENSMUST00000028769 Krtap4-16Q91W93 202 aa5.12□□□□□ -1.59
Ptpra-201ENSMUST00000028769 Sprr2iO70560 76 aa5.12□□□□□ -1.59
Ptpra-201ENSMUST00000028769 Krtap4-7Q9D732 168 aa4.99□□□□□ -1.61
Ptpra-201ENSMUST00000028769 Sprr2eO70556 76 aa4.97□□□□□ -1.61
Ptpra-201ENSMUST00000028769 Sprr2fO70557 76 aa4.92□□□□□ -1.62
Ptpra-201ENSMUST00000028769 Mt1P02802 61 aaKnown RBP4.92□□□□□ -1.62
Ptpra-201ENSMUST00000028769 Krtap28-10A0A1Y7VP58 119 aa4.92□□□□□ -1.62
Ptpra-201ENSMUST00000028769 A0A1Y7VLE6 161 aa4.81□□□□□ -1.64
Ptpra-201ENSMUST00000028769 Krtap20-2E9Q0A8 60 aa4.79□□□□□ -1.64
Ptpra-201ENSMUST00000028769 Krtap28-13A0A087WQP5 138 aa4.74□□□□□ -1.65
Ptpra-201ENSMUST00000028769 Muc19Q6PZE0 7524 aa4.73□□□□□ -1.65
Ptpra-201ENSMUST00000028769 Gm11568A2A4M2 211 aa4.7□□□□□ -1.66
Ptpra-201ENSMUST00000028769 Krtap9-1Q64526 186 aa4.7□□□□□ -1.66
Ptpra-201ENSMUST00000028769 Kmt2dQ6PDK2 5588 aa4.69□□□□□ -1.66
Ptpra-201ENSMUST00000028769 Gm10024A0A0A0MQA4 119 aa4.64□□□□□ -1.67
Ptpra-201ENSMUST00000028769 A030005K14RikA0A1Y7VNY1 122 aa4.59□□□□□ -1.67
Ptpra-201ENSMUST00000028769 A030005L19RikA0A1Y7VIU2 113 aa4.53□□□□□ -1.68
Ptpra-201ENSMUST00000028769 Krtap6-3A0A087WQL6 57 aa4.5□□□□□ -1.69
Ptpra-201ENSMUST00000028769 Hmcn1D3YXG0 5634 aa4.49□□□□□ -1.69
Ptpra-201ENSMUST00000028769 Gm7544A0A1Y7VJ58 118 aa4.38□□□□□ -1.71
Ptpra-201ENSMUST00000028769 Krtap5-2Q9D5Z7 189 aa4.37□□□□□ -1.71
Ptpra-201ENSMUST00000028769 DstQ91ZU6 7393 aaKnown RBP4.33□□□□□ -1.72
Ptpra-201ENSMUST00000028769 Gm11554B1AQB2 190 aa4.33□□□□□ -1.72
Ptpra-201ENSMUST00000028769 Mt3P28184 68 aa4.33□□□□□ -1.72
Ptpra-201ENSMUST00000028769 Gm10153A0A1B0GRL1 320 aa4.21□□□□□ -1.74
Ptpra-201ENSMUST00000028769 A0A1Y7VJ07 166 aa4.15□□□□□ -1.74
Ptpra-201ENSMUST00000028769 Gm11559Q9D3H7 191 aa4.06□□□□□ -1.76
Ptpra-201ENSMUST00000028769 Gm4553A0A1B0GSA9 284 aa4.03□□□□□ -1.76
Ptpra-201ENSMUST00000028769 NebE9Q1W3 7152 aa4□□□□□ -1.77
Ptpra-201ENSMUST00000028769 A030014E15RikA0A1Y7VJV2 120 aa3.99□□□□□ -1.77
Ptpra-201ENSMUST00000028769 A030003K21RikA0A1Y7VIM3 128 aa3.98□□□□□ -1.77
Ptpra-201ENSMUST00000028769 Gm6217A0A1Y7VJK9 128 aa3.98□□□□□ -1.77
Ptpra-201ENSMUST00000028769 Gm45337A0A1B0GS71 263 aa3.97□□□□□ -1.77
Ptpra-201ENSMUST00000028769 Gm2431E9Q8S1 172 aa3.93□□□□□ -1.78
Ptpra-201ENSMUST00000028769 Gm11639A0A1D5RLM8 5808 aa3.87□□□□□ -1.79
Ptpra-201ENSMUST00000028769 Gm40460A0A1B0GR10 244 aa3.85□□□□□ -1.79
Ptpra-201ENSMUST00000028769 Gm7579A0A1B0GRJ4 243 aa3.85□□□□□ -1.79
Ptpra-201ENSMUST00000028769 Krtap5-5Q2TA51 241 aa3.85□□□□□ -1.79
Ptpra-201ENSMUST00000028769 Krtap5-4Q62220 223 aa3.85□□□□□ -1.79
Ptpra-201ENSMUST00000028769 1110025L11RikO09048 78 aa3.79□□□□□ -1.8
Ptpra-201ENSMUST00000028769 Krtap6-5Q925H3 78 aa3.79□□□□□ -1.8
Ptpra-201ENSMUST00000028769 A0A286YCP9 139 aa3.75□□□□□ -1.81
Ptpra-201ENSMUST00000028769 Gm39115A0A1B0GSH7 232 aa3.59□□□□□ -1.84
Ptpra-201ENSMUST00000028769 Eppk1Q8R0W0 6548 aa3.52□□□□□ -1.85
Ptpra-201ENSMUST00000028769 AhnakE9Q616 5656 aaKnown RBP3.51□□□□□ -1.85
Ptpra-201ENSMUST00000028769 Gm10229O08631 77 aa3.36□□□□□ -1.87
Ptpra-201ENSMUST00000028769 Sprr2bO70554 98 aa3.24□□□□□ -1.89
Ptpra-201ENSMUST00000028769 Gm11567Q9D141 195 aa3.21□□□□□ -1.9
Ptpra-201ENSMUST00000028769 Phgr1Q8K0G7 91 aa3.17□□□□□ -1.9
Ptpra-201ENSMUST00000028769 Gpr98Q8VHN7 6298 aaKnown RBP3.16□□□□□ -1.9
Ptpra-201ENSMUST00000028769 Gm45618A0A1B0GSA0 219 aa3.1□□□□□ -1.91
Ptpra-201ENSMUST00000028769 Krtap21-1Q925H4 128 aa3.08□□□□□ -1.92
Ptpra-201ENSMUST00000028769 Gm29735A0A1B0GT06 219 aa2.89□□□□□ -1.95
Ptpra-201ENSMUST00000028769 Krtap6-2O08884 159 aa2.83□□□□□ -1.96
Ptpra-201ENSMUST00000028769 Krtap5-1Q64507 230 aa1.9□□□□□ -2.11
Ptpra-201ENSMUST00000028769 Gm4559A4IF42 199 aa1.87□□□□□ -2.11
Retrieved 80 of 22,080 RNA–protein pairs in 8.4 ms