RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Lce1fB9EJP6 147 aa4.61□□□□□ -1.67
Rtf1-201ENSMUST00000028767 Lce1cQ9D1C5 147 aa4.61□□□□□ -1.67
Rtf1-201ENSMUST00000028767 Lce1lQ9D1G7 135 aa4.61□□□□□ -1.67
Rtf1-201ENSMUST00000028767 Sprr2iO70560 76 aa4.59□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Lce1eQ9D139 143 aa4.58□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Gm11564A2A4L9 201 aa4.56□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Gm11563B1AQ90 168 aa4.56□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Gm11595B1AQA7 289 aa4.56□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Krtap4-8B1AQA8 209 aa4.56□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Gm11596B1AQB0 205 aa4.56□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Krtap4-9B1AQA9 244 aa4.54□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Gm11562A0PK51 136 aa4.54□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Muc16A0A140LJ72 8478 aa4.53□□□□□ -1.68
Rtf1-201ENSMUST00000028767 Syne2Q6ZWQ0 6874 aaKnown RBP4.5□□□□□ -1.69
Rtf1-201ENSMUST00000028767 2300003K06RikA2A4M0 262 aa4.44□□□□□ -1.7
Rtf1-201ENSMUST00000028767 A0A1Y7VJH8 109 aa4.44□□□□□ -1.7
Rtf1-201ENSMUST00000028767 Krtap4-13Q9D7P3 165 aa4.42□□□□□ -1.7
Rtf1-201ENSMUST00000028767 Lce1a1Q9CQH5 143 aa4.37□□□□□ -1.71
Rtf1-201ENSMUST00000028767 Lce1kJ3QP15 125 aa4.32□□□□□ -1.72
Rtf1-201ENSMUST00000028767 Krtap4-7Q9D732 168 aa4.32□□□□□ -1.72
Rtf1-201ENSMUST00000028767 Krtap28-10A0A1Y7VP58 119 aa4.3□□□□□ -1.72
Rtf1-201ENSMUST00000028767 ObscnA2AAJ9 8891 aaKnown RBP4.29□□□□□ -1.72
Rtf1-201ENSMUST00000028767 A0A1Y7VLE6 161 aa4.29□□□□□ -1.72
Rtf1-201ENSMUST00000028767 Gm10024A0A0A0MQA4 119 aa4.22□□□□□ -1.73
Rtf1-201ENSMUST00000028767 Krtap31-1Q9D644 177 aa4.2□□□□□ -1.74
Rtf1-201ENSMUST00000028767 Sprr2hO70559 108 aa4.17□□□□□ -1.74
Rtf1-201ENSMUST00000028767 Macf1Q9QXZ0 7354 aaKnown RBP4.15□□□□□ -1.74
Rtf1-201ENSMUST00000028767 Gm11555B1AQ89 175 aa4.14□□□□□ -1.75
Rtf1-201ENSMUST00000028767 Sprr2eO70556 76 aa4.09□□□□□ -1.75
Rtf1-201ENSMUST00000028767 Krtap28-13A0A087WQP5 138 aa4.07□□□□□ -1.76
Rtf1-201ENSMUST00000028767 Sprr2fO70557 76 aa4.06□□□□□ -1.76
Rtf1-201ENSMUST00000028767 Krtap4-16Q91W93 202 aa4.04□□□□□ -1.76
Rtf1-201ENSMUST00000028767 A030005L19RikA0A1Y7VIU2 113 aa4.03□□□□□ -1.76
Rtf1-201ENSMUST00000028767 Mt1P02802 61 aaKnown RBP4□□□□□ -1.77
Rtf1-201ENSMUST00000028767 Krtap20-2E9Q0A8 60 aa3.97□□□□□ -1.77
Rtf1-201ENSMUST00000028767 Gm7544A0A1Y7VJ58 118 aa3.97□□□□□ -1.77
Rtf1-201ENSMUST00000028767 A030005K14RikA0A1Y7VNY1 122 aa3.95□□□□□ -1.78
Rtf1-201ENSMUST00000028767 Mt3P28184 68 aa3.85□□□□□ -1.79
Rtf1-201ENSMUST00000028767 Krtap6-3A0A087WQL6 57 aa3.83□□□□□ -1.8
Rtf1-201ENSMUST00000028767 A030003K21RikA0A1Y7VIM3 128 aa3.79□□□□□ -1.8
Rtf1-201ENSMUST00000028767 Gm11554B1AQB2 190 aa3.78□□□□□ -1.8
Rtf1-201ENSMUST00000028767 Muc19Q6PZE0 7524 aa3.73□□□□□ -1.81
Rtf1-201ENSMUST00000028767 A0A1Y7VJ07 166 aa3.65□□□□□ -1.83
Rtf1-201ENSMUST00000028767 Gm6217A0A1Y7VJK9 128 aa3.64□□□□□ -1.83
Rtf1-201ENSMUST00000028767 Gm11568A2A4M2 211 aa3.61□□□□□ -1.83
Rtf1-201ENSMUST00000028767 Krtap9-1Q64526 186 aa3.61□□□□□ -1.83
Rtf1-201ENSMUST00000028767 DstQ91ZU6 7393 aaKnown RBP3.54□□□□□ -1.84
Rtf1-201ENSMUST00000028767 NebE9Q1W3 7152 aa3.48□□□□□ -1.85
Rtf1-201ENSMUST00000028767 Kmt2dQ6PDK2 5588 aa3.43□□□□□ -1.86
Rtf1-201ENSMUST00000028767 A030014E15RikA0A1Y7VJV2 120 aa3.39□□□□□ -1.87
Rtf1-201ENSMUST00000028767 Hmcn1D3YXG0 5634 aa3.36□□□□□ -1.87
Rtf1-201ENSMUST00000028767 Krtap5-2Q9D5Z7 189 aa3.31□□□□□ -1.88
Rtf1-201ENSMUST00000028767 Gm11559Q9D3H7 191 aa3.28□□□□□ -1.88
Rtf1-201ENSMUST00000028767 A0A286YCP9 139 aa3.2□□□□□ -1.9
Rtf1-201ENSMUST00000028767 1110025L11RikO09048 78 aa3.17□□□□□ -1.9
Rtf1-201ENSMUST00000028767 Krtap6-5Q925H3 78 aa3.17□□□□□ -1.9
Rtf1-201ENSMUST00000028767 Gm10153A0A1B0GRL1 320 aa3.08□□□□□ -1.92
Rtf1-201ENSMUST00000028767 Gm4553A0A1B0GSA9 284 aa3.05□□□□□ -1.92
Rtf1-201ENSMUST00000028767 Gm11639A0A1D5RLM8 5808 aa3.02□□□□□ -1.93
Rtf1-201ENSMUST00000028767 Sprr2bO70554 98 aa2.99□□□□□ -1.93
Rtf1-201ENSMUST00000028767 Gm2431E9Q8S1 172 aa2.98□□□□□ -1.93
Rtf1-201ENSMUST00000028767 Gpr98Q8VHN7 6298 aaKnown RBP2.93□□□□□ -1.94
Rtf1-201ENSMUST00000028767 Eppk1Q8R0W0 6548 aa2.92□□□□□ -1.94
Rtf1-201ENSMUST00000028767 Gm10229O08631 77 aa2.88□□□□□ -1.95
Rtf1-201ENSMUST00000028767 Gm45337A0A1B0GS71 263 aa2.86□□□□□ -1.95
Rtf1-201ENSMUST00000028767 AhnakE9Q616 5656 aaKnown RBP2.78□□□□□ -1.96
Rtf1-201ENSMUST00000028767 Gm40460A0A1B0GR10 244 aa2.78□□□□□ -1.96
Rtf1-201ENSMUST00000028767 Gm7579A0A1B0GRJ4 243 aa2.78□□□□□ -1.96
Rtf1-201ENSMUST00000028767 Krtap5-5Q2TA51 241 aa2.78□□□□□ -1.96
Rtf1-201ENSMUST00000028767 Krtap5-4Q62220 223 aa2.78□□□□□ -1.96
Rtf1-201ENSMUST00000028767 Krtap31-2Q8CAY5 177 aa2.66□□□□□ -1.98
Rtf1-201ENSMUST00000028767 Phgr1Q8K0G7 91 aa2.65□□□□□ -1.99
Rtf1-201ENSMUST00000028767 Gm39115A0A1B0GSH7 232 aa2.54□□□□□ -2
Rtf1-201ENSMUST00000028767 Krtap21-1Q925H4 128 aa2.45□□□□□ -2.02
Rtf1-201ENSMUST00000028767 Gm11567Q9D141 195 aa2.4□□□□□ -2.03
Rtf1-201ENSMUST00000028767 Krtap6-2O08884 159 aa2.39□□□□□ -2.03
Rtf1-201ENSMUST00000028767 Gm45618A0A1B0GSA0 219 aa2.21□□□□□ -2.06
Rtf1-201ENSMUST00000028767 Gm29735A0A1B0GT06 219 aa2.08□□□□□ -2.08
Rtf1-201ENSMUST00000028767 Krtap5-1Q64507 230 aa1.54□□□□□ -2.16
Rtf1-201ENSMUST00000028767 Gm4559A4IF42 199 aa1.41□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 12.6 ms