RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Sprr2hO70559 108 aa5,86□□□□□ -1,47
Tram1-201ENSMUST00000027068 Lce3eF8VQJ0 98 aa5,81□□□□□ -1,48
Tram1-201ENSMUST00000027068 Lce3fQ6PAI4 98 aa5,81□□□□□ -1,48
Tram1-201ENSMUST00000027068 Krtap4-16Q91W93 202 aa5,81□□□□□ -1,48
Tram1-201ENSMUST00000027068 Krtap4-1Q3UUY3 169 aa5,8□□□□□ -1,48
Tram1-201ENSMUST00000027068 Sprr2fO70557 76 aa5,79□□□□□ -1,48
Tram1-201ENSMUST00000027068 Syne2Q6ZWQ0 6874 aaKnown RBP5,76□□□□□ -1,49
Tram1-201ENSMUST00000027068 Gm11596B1AQB0 205 aa5,75□□□□□ -1,49
Tram1-201ENSMUST00000027068 ObscnA2AAJ9 8891 aaKnown RBP5,75□□□□□ -1,49
Tram1-201ENSMUST00000027068 Lce3aQ497I5 98 aa5,73□□□□□ -1,49
Tram1-201ENSMUST00000027068 Sprr2eO70556 76 aa5,69□□□□□ -1,5
Tram1-201ENSMUST00000027068 2300003K06RikA2A4M0 262 aa5,65□□□□□ -1,5
Tram1-201ENSMUST00000027068 Fsip2A2ARZ3 6995 aa5,64□□□□□ -1,51
Tram1-201ENSMUST00000027068 Gm38119A0A0A6YX29 146 aa5,62□□□□□ -1,51
Tram1-201ENSMUST00000027068 Gm11564A2A4L9 201 aa5,62□□□□□ -1,51
Tram1-201ENSMUST00000027068 Gm11563B1AQ90 168 aa5,62□□□□□ -1,51
Tram1-201ENSMUST00000027068 Gm11595B1AQA7 289 aa5,62□□□□□ -1,51
Tram1-201ENSMUST00000027068 Krtap4-8B1AQA8 209 aa5,62□□□□□ -1,51
Tram1-201ENSMUST00000027068 Mt4P47945 62 aa5,51□□□□□ -1,53
Tram1-201ENSMUST00000027068 Krtap4-9B1AQA9 244 aa5,49□□□□□ -1,53
Tram1-201ENSMUST00000027068 Sprr2kO70562 68 aa5,47□□□□□ -1,53
Tram1-201ENSMUST00000027068 Muc16A0A140LJ72 8478 aa5,4□□□□□ -1,55
Tram1-201ENSMUST00000027068 Lce1bQ9D149 137 aa5,37□□□□□ -1,55
Tram1-201ENSMUST00000027068 Lce1lQ9D1G7 135 aa5,31□□□□□ -1,56
Tram1-201ENSMUST00000027068 Krtap4-13Q9D7P3 165 aa5,3□□□□□ -1,56
Tram1-201ENSMUST00000027068 Mt1P02802 61 aaKnown RBP5,27□□□□□ -1,57
Tram1-201ENSMUST00000027068 Lce1kJ3QP15 125 aa5,26□□□□□ -1,57
Tram1-201ENSMUST00000027068 A0A1Y7VJH8 109 aa5,11□□□□□ -1,59
Tram1-201ENSMUST00000027068 Krtap4-7Q9D732 168 aa5,1□□□□□ -1,59
Tram1-201ENSMUST00000027068 Gm10024A0A0A0MQA4 119 aa5,07□□□□□ -1,6
Tram1-201ENSMUST00000027068 Gm11568A2A4M2 211 aa4,94□□□□□ -1,62
Tram1-201ENSMUST00000027068 Krtap9-1Q64526 186 aa4,94□□□□□ -1,62
Tram1-201ENSMUST00000027068 Krtap6-3A0A087WQL6 57 aa4,91□□□□□ -1,62
Tram1-201ENSMUST00000027068 Krtap28-10A0A1Y7VP58 119 aa4,9□□□□□ -1,62
Tram1-201ENSMUST00000027068 A0A1Y7VLE6 161 aa4,86□□□□□ -1,63
Tram1-201ENSMUST00000027068 Macf1Q9QXZ0 7354 aaKnown RBP4,84□□□□□ -1,63
Tram1-201ENSMUST00000027068 Krtap20-2E9Q0A8 60 aa4,83□□□□□ -1,64
Tram1-201ENSMUST00000027068 Krtap28-13A0A087WQP5 138 aa4,82□□□□□ -1,64
Tram1-201ENSMUST00000027068 A030005K14RikA0A1Y7VNY1 122 aa4,72□□□□□ -1,65
Tram1-201ENSMUST00000027068 Krtap5-2Q9D5Z7 189 aa4,7□□□□□ -1,66
Tram1-201ENSMUST00000027068 Mt3P28184 68 aa4,58□□□□□ -1,68
Tram1-201ENSMUST00000027068 Gm10153A0A1B0GRL1 320 aa4,56□□□□□ -1,68
Tram1-201ENSMUST00000027068 Kmt2dQ6PDK2 5588 aa4,55□□□□□ -1,68
Tram1-201ENSMUST00000027068 Hmcn1D3YXG0 5634 aa4,46□□□□□ -1,69
Tram1-201ENSMUST00000027068 A030005L19RikA0A1Y7VIU2 113 aa4,45□□□□□ -1,7
Tram1-201ENSMUST00000027068 Gm11559Q9D3H7 191 aa4,39□□□□□ -1,71
Tram1-201ENSMUST00000027068 Gm4553A0A1B0GSA9 284 aa4,36□□□□□ -1,71
Tram1-201ENSMUST00000027068 Muc19Q6PZE0 7524 aa4,32□□□□□ -1,72
Tram1-201ENSMUST00000027068 Gm11554B1AQB2 190 aa4,32□□□□□ -1,72
Tram1-201ENSMUST00000027068 Gm7544A0A1Y7VJ58 118 aa4,31□□□□□ -1,72
Tram1-201ENSMUST00000027068 A0A1Y7VJ07 166 aa4,29□□□□□ -1,72
Tram1-201ENSMUST00000027068 Gm45337A0A1B0GS71 263 aa4,28□□□□□ -1,72
Tram1-201ENSMUST00000027068 Gm2431E9Q8S1 172 aa4,25□□□□□ -1,73
Tram1-201ENSMUST00000027068 A030014E15RikA0A1Y7VJV2 120 aa4,18□□□□□ -1,74
Tram1-201ENSMUST00000027068 Gm40460A0A1B0GR10 244 aa4,15□□□□□ -1,75
Tram1-201ENSMUST00000027068 Gm7579A0A1B0GRJ4 243 aa4,15□□□□□ -1,75
Tram1-201ENSMUST00000027068 Krtap5-5Q2TA51 241 aa4,15□□□□□ -1,75
Tram1-201ENSMUST00000027068 Krtap5-4Q62220 223 aa4,15□□□□□ -1,75
Tram1-201ENSMUST00000027068 1110025L11RikO09048 78 aa4,09□□□□□ -1,75
Tram1-201ENSMUST00000027068 Krtap6-5Q925H3 78 aa4,09□□□□□ -1,75
Tram1-201ENSMUST00000027068 Eppk1Q8R0W0 6548 aa3,93□□□□□ -1,78
Tram1-201ENSMUST00000027068 Gm39115A0A1B0GSH7 232 aa3,9□□□□□ -1,79
Tram1-201ENSMUST00000027068 DstQ91ZU6 7393 aaKnown RBP3,89□□□□□ -1,79
Tram1-201ENSMUST00000027068 Gm11639A0A1D5RLM8 5808 aa3,78□□□□□ -1,8
Tram1-201ENSMUST00000027068 A030003K21RikA0A1Y7VIM3 128 aa3,73□□□□□ -1,81
Tram1-201ENSMUST00000027068 Sprr2bO70554 98 aa3,71□□□□□ -1,82
Tram1-201ENSMUST00000027068 A0A286YCP9 139 aa3,64□□□□□ -1,83
Tram1-201ENSMUST00000027068 Gm6217A0A1Y7VJK9 128 aa3,62□□□□□ -1,83
Tram1-201ENSMUST00000027068 Gm10229O08631 77 aa3,61□□□□□ -1,83
Tram1-201ENSMUST00000027068 AhnakE9Q616 5656 aaKnown RBP3,58□□□□□ -1,84
Tram1-201ENSMUST00000027068 NebE9Q1W3 7152 aa3,5□□□□□ -1,85
Tram1-201ENSMUST00000027068 Phgr1Q8K0G7 91 aa3,46□□□□□ -1,86
Tram1-201ENSMUST00000027068 Gm45618A0A1B0GSA0 219 aa3,41□□□□□ -1,86
Tram1-201ENSMUST00000027068 Gpr98Q8VHN7 6298 aaKnown RBP3,41□□□□□ -1,86
Tram1-201ENSMUST00000027068 Gm11567Q9D141 195 aa3,39□□□□□ -1,87
Tram1-201ENSMUST00000027068 Krtap21-1Q925H4 128 aa3,37□□□□□ -1,87
Tram1-201ENSMUST00000027068 Gm29735A0A1B0GT06 219 aa3,1□□□□□ -1,91
Tram1-201ENSMUST00000027068 Krtap6-2O08884 159 aa3□□□□□ -1,93
Tram1-201ENSMUST00000027068 Krtap5-1Q64507 230 aa2,06□□□□□ -2,08
Tram1-201ENSMUST00000027068 Gm4559A4IF42 199 aa1,84□□□□□ -2,11
Retrieved 80 of 22,080 RNA–protein pairs in 10,6 ms