RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Syne1Q6ZWR6 8799 aa2.66□□□□□ -1.98
Ddb1-201ENSMUST00000025649 Krtap9-3Q3V2C1 136 aa2.65□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Lce3aQ497I5 98 aa2.63□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Fsip2A2ARZ3 6995 aa2.62□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Krtap31-1Q9D644 177 aa2.59□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Lce1fB9EJP6 147 aa2.59□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Lce1cQ9D1C5 147 aa2.59□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Lce1lQ9D1G7 135 aa2.59□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Lce1dQ9D731 133 aa2.59□□□□□ -1.99
Ddb1-201ENSMUST00000025649 Lce1bQ9D149 137 aa2.58□□□□□ -2
Ddb1-201ENSMUST00000025649 Krtap4-13Q9D7P3 165 aa2.57□□□□□ -2
Ddb1-201ENSMUST00000025649 Lce1hQ9D6R3 140 aa2.56□□□□□ -2
Ddb1-201ENSMUST00000025649 Sprr2eO70556 76 aa2.53□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Sprr2fO70557 76 aa2.52□□□□□ -2.01
Ddb1-201ENSMUST00000025649 2300003K06RikA2A4M0 262 aa2.51□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Lce1eQ9D139 143 aa2.51□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Krtap19-4Q925H7 84 aa2.47□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Krtap4-7Q9D732 168 aa2.47□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Krtap6-3A0A087WQL6 57 aa2.46□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Gm10024A0A0A0MQA4 119 aa2.46□□□□□ -2.01
Ddb1-201ENSMUST00000025649 Krtap31-2Q8CAY5 177 aa2.4□□□□□ -2.02
Ddb1-201ENSMUST00000025649 Muc16A0A140LJ72 8478 aa2.35□□□□□ -2.03
Ddb1-201ENSMUST00000025649 Macf1Q9QXZ0 7354 aaKnown RBP2.34□□□□□ -2.03
Ddb1-201ENSMUST00000025649 Lce1a1Q9CQH5 143 aa2.32□□□□□ -2.04
Ddb1-201ENSMUST00000025649 Lce1kJ3QP15 125 aa2.29□□□□□ -2.04
Ddb1-201ENSMUST00000025649 Krtap20-2E9Q0A8 60 aa2.27□□□□□ -2.05
Ddb1-201ENSMUST00000025649 ObscnA2AAJ9 8891 aaKnown RBP2.22□□□□□ -2.05
Ddb1-201ENSMUST00000025649 Sprr2dO70555 85 aa2.21□□□□□ -2.06
Ddb1-201ENSMUST00000025649 Sprr2hO70559 108 aa2.21□□□□□ -2.06
Ddb1-201ENSMUST00000025649 Gm11938Q9D3H4 131 aa2.21□□□□□ -2.06
Ddb1-201ENSMUST00000025649 Mt3P28184 68 aa2.15□□□□□ -2.06
Ddb1-201ENSMUST00000025649 Gm11554B1AQB2 190 aa2.14□□□□□ -2.07
Ddb1-201ENSMUST00000025649 Krtap5-2Q9D5Z7 189 aa2.1□□□□□ -2.07
Ddb1-201ENSMUST00000025649 Gm11568A2A4M2 211 aa2.09□□□□□ -2.07
Ddb1-201ENSMUST00000025649 Krtap9-1Q64526 186 aa2.09□□□□□ -2.07
Ddb1-201ENSMUST00000025649 A0A1Y7VJH8 109 aa2.09□□□□□ -2.08
Ddb1-201ENSMUST00000025649 Mt1P02802 61 aaKnown RBP2.09□□□□□ -2.08
Ddb1-201ENSMUST00000025649 Gm11559Q9D3H7 191 aa2.08□□□□□ -2.08
Ddb1-201ENSMUST00000025649 DstQ91ZU6 7393 aaKnown RBP2.06□□□□□ -2.08
Ddb1-201ENSMUST00000025649 Eppk1Q8R0W0 6548 aa2.04□□□□□ -2.08
Ddb1-201ENSMUST00000025649 Kmt2dQ6PDK2 5588 aa1.99□□□□□ -2.09
Ddb1-201ENSMUST00000025649 Gm4553A0A1B0GSA9 284 aa1.99□□□□□ -2.09
Ddb1-201ENSMUST00000025649 NebE9Q1W3 7152 aa1.96□□□□□ -2.09
Ddb1-201ENSMUST00000025649 Muc19Q6PZE0 7524 aa1.95□□□□□ -2.1
Ddb1-201ENSMUST00000025649 A030005L19RikA0A1Y7VIU2 113 aa1.93□□□□□ -2.1
Ddb1-201ENSMUST00000025649 Gm2431E9Q8S1 172 aa1.92□□□□□ -2.1
Ddb1-201ENSMUST00000025649 Sprr2bO70554 98 aa1.91□□□□□ -2.1
Ddb1-201ENSMUST00000025649 Krtap4-16Q91W93 202 aa1.91□□□□□ -2.1
Ddb1-201ENSMUST00000025649 Hmcn1D3YXG0 5634 aa1.91□□□□□ -2.1
Ddb1-201ENSMUST00000025649 Gm11639A0A1D5RLM8 5808 aa1.91□□□□□ -2.1
Ddb1-201ENSMUST00000025649 Gm10153A0A1B0GRL1 320 aa1.89□□□□□ -2.11
Ddb1-201ENSMUST00000025649 Gm45337A0A1B0GS71 263 aa1.89□□□□□ -2.11
Ddb1-201ENSMUST00000025649 Gm40460A0A1B0GR10 244 aa1.83□□□□□ -2.12
Ddb1-201ENSMUST00000025649 Gm7579A0A1B0GRJ4 243 aa1.83□□□□□ -2.12
Ddb1-201ENSMUST00000025649 Krtap5-5Q2TA51 241 aa1.83□□□□□ -2.12
Ddb1-201ENSMUST00000025649 Krtap5-4Q62220 223 aa1.83□□□□□ -2.12
Ddb1-201ENSMUST00000025649 Gpr98Q8VHN7 6298 aaKnown RBP1.8□□□□□ -2.12
Ddb1-201ENSMUST00000025649 Gm39115A0A1B0GSH7 232 aa1.77□□□□□ -2.13
Ddb1-201ENSMUST00000025649 AhnakE9Q616 5656 aaKnown RBP1.68□□□□□ -2.14
Ddb1-201ENSMUST00000025649 A0A1Y7VLE6 161 aa1.65□□□□□ -2.14
Ddb1-201ENSMUST00000025649 1110025L11RikO09048 78 aa1.62□□□□□ -2.15
Ddb1-201ENSMUST00000025649 Krtap6-5Q925H3 78 aa1.62□□□□□ -2.15
Ddb1-201ENSMUST00000025649 Gm45618A0A1B0GSA0 219 aa1.6□□□□□ -2.15
Ddb1-201ENSMUST00000025649 Gm10229O08631 77 aa1.53□□□□□ -2.16
Ddb1-201ENSMUST00000025649 A0A286YCP9 139 aa1.52□□□□□ -2.17
Ddb1-201ENSMUST00000025649 Krtap28-13A0A087WQP5 138 aa1.45□□□□□ -2.18
Ddb1-201ENSMUST00000025649 Phgr1Q8K0G7 91 aa1.37□□□□□ -2.19
Ddb1-201ENSMUST00000025649 Gm29735A0A1B0GT06 219 aa1.35□□□□□ -2.19
Ddb1-201ENSMUST00000025649 Gm11567Q9D141 195 aa1.35□□□□□ -2.19
Ddb1-201ENSMUST00000025649 A0A1Y7VJ07 166 aa1.31□□□□□ -2.2
Ddb1-201ENSMUST00000025649 Krtap6-2O08884 159 aa1.26□□□□□ -2.21
Ddb1-201ENSMUST00000025649 Krtap21-1Q925H4 128 aa1.23□□□□□ -2.21
Ddb1-201ENSMUST00000025649 A030014E15RikA0A1Y7VJV2 120 aa1.14□□□□□ -2.23
Ddb1-201ENSMUST00000025649 A030005K14RikA0A1Y7VNY1 122 aa1.09□□□□□ -2.24
Ddb1-201ENSMUST00000025649 Krtap28-10A0A1Y7VP58 119 aa1.07□□□□□ -2.24
Ddb1-201ENSMUST00000025649 A030003K21RikA0A1Y7VIM3 128 aa1.06□□□□□ -2.24
Ddb1-201ENSMUST00000025649 Krtap5-1Q64507 230 aa1.01□□□□□ -2.25
Ddb1-201ENSMUST00000025649 Gm7544A0A1Y7VJ58 118 aa0.96□□□□□ -2.26
Ddb1-201ENSMUST00000025649 Gm6217A0A1Y7VJK9 128 aa0.87□□□□□ -2.27
Ddb1-201ENSMUST00000025649 Gm4559A4IF42 199 aa0.77□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 778.1 ms