RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 A030003K21RikA0A1Y7VIM3 128 aa6,87□□□□□ -1,31
Cdx1-201ENSMUST00000025521 Lce1eQ9D139 143 aa6,87□□□□□ -1,31
Cdx1-201ENSMUST00000025521 Krtap19-4Q925H7 84 aa6,69□□□□□ -1,34
Cdx1-201ENSMUST00000025521 Gm11564A2A4L9 201 aa6,62□□□□□ -1,35
Cdx1-201ENSMUST00000025521 Gm11595B1AQA7 289 aa6,62□□□□□ -1,35
Cdx1-201ENSMUST00000025521 Krtap4-8B1AQA8 209 aa6,62□□□□□ -1,35
Cdx1-201ENSMUST00000025521 Lce1cQ9D1C5 147 aa6,61□□□□□ -1,35
Cdx1-201ENSMUST00000025521 Lce1bQ9D149 137 aa6,59□□□□□ -1,35
Cdx1-201ENSMUST00000025521 Lce3bQ9CQM7 98 aa6,54□□□□□ -1,36
Cdx1-201ENSMUST00000025521 Syne1Q6ZWR6 8799 aa6,53□□□□□ -1,36
Cdx1-201ENSMUST00000025521 Gm6217A0A1Y7VJK9 128 aa6,53□□□□□ -1,36
Cdx1-201ENSMUST00000025521 Mt4P47945 62 aa6,52□□□□□ -1,37
Cdx1-201ENSMUST00000025521 Krtap4-9B1AQA9 244 aa6,46□□□□□ -1,38
Cdx1-201ENSMUST00000025521 Gm38119A0A0A6YX29 146 aa6,41□□□□□ -1,38
Cdx1-201ENSMUST00000025521 Gm10100J3QK64 120 aa6,39□□□□□ -1,39
Cdx1-201ENSMUST00000025521 Lce1fB9EJP6 147 aa6,34□□□□□ -1,39
Cdx1-201ENSMUST00000025521 Lce1a1Q9CQH5 143 aa6,34□□□□□ -1,39
Cdx1-201ENSMUST00000025521 Gm10142J3KMP7 120 aa6,26□□□□□ -1,41
Cdx1-201ENSMUST00000025521 Fsip2A2ARZ3 6995 aa6,26□□□□□ -1,41
Cdx1-201ENSMUST00000025521 Lce3cQ91V05 98 aa6,23□□□□□ -1,41
Cdx1-201ENSMUST00000025521 2300003K06RikA2A4M0 262 aa6,22□□□□□ -1,41
Cdx1-201ENSMUST00000025521 Sprr2kO70562 68 aa6,21□□□□□ -1,42
Cdx1-201ENSMUST00000025521 Krtap4-13Q9D7P3 165 aa6,21□□□□□ -1,42
Cdx1-201ENSMUST00000025521 Lce3eF8VQJ0 98 aa6,19□□□□□ -1,42
Cdx1-201ENSMUST00000025521 Lce3fQ6PAI4 98 aa6,19□□□□□ -1,42
Cdx1-201ENSMUST00000025521 Lce3dE9Q8V1 98 aa6,16□□□□□ -1,42
Cdx1-201ENSMUST00000025521 Sprr2hO70559 108 aa6,13□□□□□ -1,43
Cdx1-201ENSMUST00000025521 Mt1P02802 61 aaKnown RBP6,06□□□□□ -1,44
Cdx1-201ENSMUST00000025521 Krtap6-3A0A087WQL6 57 aa6,06□□□□□ -1,44
Cdx1-201ENSMUST00000025521 A0A286YCP9 139 aa6,06□□□□□ -1,44
Cdx1-201ENSMUST00000025521 ObscnA2AAJ9 8891 aaKnown RBP6,05□□□□□ -1,44
Cdx1-201ENSMUST00000025521 Sprr2iO70560 76 aa6,03□□□□□ -1,44
Cdx1-201ENSMUST00000025521 Lce1kJ3QP15 125 aa6,01□□□□□ -1,45
Cdx1-201ENSMUST00000025521 Lce1lQ9D1G7 135 aa5,98□□□□□ -1,45
Cdx1-201ENSMUST00000025521 Lce3aQ497I5 98 aa5,93□□□□□ -1,46
Cdx1-201ENSMUST00000025521 Sprr2eO70556 76 aa5,93□□□□□ -1,46
Cdx1-201ENSMUST00000025521 Gm11568A2A4M2 211 aa5,86□□□□□ -1,47
Cdx1-201ENSMUST00000025521 Krtap9-1Q64526 186 aa5,86□□□□□ -1,47
Cdx1-201ENSMUST00000025521 Krtap5-2Q9D5Z7 189 aa5,86□□□□□ -1,47
Cdx1-201ENSMUST00000025521 Krtap20-2E9Q0A8 60 aa5,76□□□□□ -1,49
Cdx1-201ENSMUST00000025521 Sprr2fO70557 76 aa5,62□□□□□ -1,51
Cdx1-201ENSMUST00000025521 Gm10153A0A1B0GRL1 320 aa5,6□□□□□ -1,51
Cdx1-201ENSMUST00000025521 Krtap31-1Q9D644 177 aa5,52□□□□□ -1,53
Cdx1-201ENSMUST00000025521 Mt3P28184 68 aa5,39□□□□□ -1,55
Cdx1-201ENSMUST00000025521 Gm4553A0A1B0GSA9 284 aa5,39□□□□□ -1,55
Cdx1-201ENSMUST00000025521 Gm45337A0A1B0GS71 263 aa5,37□□□□□ -1,55
Cdx1-201ENSMUST00000025521 Gm11559Q9D3H7 191 aa5,29□□□□□ -1,56
Cdx1-201ENSMUST00000025521 Gm40460A0A1B0GR10 244 aa5,24□□□□□ -1,57
Cdx1-201ENSMUST00000025521 Gm7579A0A1B0GRJ4 243 aa5,24□□□□□ -1,57
Cdx1-201ENSMUST00000025521 Krtap5-5Q2TA51 241 aa5,24□□□□□ -1,57
Cdx1-201ENSMUST00000025521 Krtap5-4Q62220 223 aa5,24□□□□□ -1,57
Cdx1-201ENSMUST00000025521 Gm45618A0A1B0GSA0 219 aa5,2□□□□□ -1,58
Cdx1-201ENSMUST00000025521 Gm10024A0A0A0MQA4 119 aa5,19□□□□□ -1,58
Cdx1-201ENSMUST00000025521 Gm2431E9Q8S1 172 aa5,17□□□□□ -1,58
Cdx1-201ENSMUST00000025521 Hmcn1D3YXG0 5634 aa5,11□□□□□ -1,59
Cdx1-201ENSMUST00000025521 Macf1Q9QXZ0 7354 aaKnown RBP5,1□□□□□ -1,59
Cdx1-201ENSMUST00000025521 Krtap4-16Q91W93 202 aa5,07□□□□□ -1,6
Cdx1-201ENSMUST00000025521 Gm11554B1AQB2 190 aa5,04□□□□□ -1,6
Cdx1-201ENSMUST00000025521 Eppk1Q8R0W0 6548 aa5,03□□□□□ -1,6
Cdx1-201ENSMUST00000025521 Gm39115A0A1B0GSH7 232 aa4,96□□□□□ -1,61
Cdx1-201ENSMUST00000025521 Kmt2dQ6PDK2 5588 aa4,93□□□□□ -1,62
Cdx1-201ENSMUST00000025521 Krtap31-2Q8CAY5 177 aa4,81□□□□□ -1,64
Cdx1-201ENSMUST00000025521 Gm11567Q9D141 195 aa4,78□□□□□ -1,64
Cdx1-201ENSMUST00000025521 Gm29735A0A1B0GT06 219 aa4,75□□□□□ -1,65
Cdx1-201ENSMUST00000025521 Gm11639A0A1D5RLM8 5808 aa4,72□□□□□ -1,65
Cdx1-201ENSMUST00000025521 Muc19Q6PZE0 7524 aa4,63□□□□□ -1,67
Cdx1-201ENSMUST00000025521 1110025L11RikO09048 78 aa4,63□□□□□ -1,67
Cdx1-201ENSMUST00000025521 Krtap6-5Q925H3 78 aa4,63□□□□□ -1,67
Cdx1-201ENSMUST00000025521 Muc16A0A140LJ72 8478 aa4,45□□□□□ -1,7
Cdx1-201ENSMUST00000025521 DstQ91ZU6 7393 aaKnown RBP4,44□□□□□ -1,7
Cdx1-201ENSMUST00000025521 Gpr98Q8VHN7 6298 aaKnown RBP4,44□□□□□ -1,7
Cdx1-201ENSMUST00000025521 AhnakE9Q616 5656 aaKnown RBP4,32□□□□□ -1,72
Cdx1-201ENSMUST00000025521 NebE9Q1W3 7152 aa4,27□□□□□ -1,73
Cdx1-201ENSMUST00000025521 Sprr2bO70554 98 aa4,26□□□□□ -1,73
Cdx1-201ENSMUST00000025521 Gm10229O08631 77 aa4,09□□□□□ -1,76
Cdx1-201ENSMUST00000025521 Krtap21-1Q925H4 128 aa3,81□□□□□ -1,8
Cdx1-201ENSMUST00000025521 Phgr1Q8K0G7 91 aa3,61□□□□□ -1,83
Cdx1-201ENSMUST00000025521 Krtap6-2O08884 159 aa3,46□□□□□ -1,86
Cdx1-201ENSMUST00000025521 Krtap5-1Q64507 230 aa3,39□□□□□ -1,87
Cdx1-201ENSMUST00000025521 Gm4559A4IF42 199 aa3,35□□□□□ -1,87
Retrieved 80 of 22,080 RNA–protein pairs in 44,2 ms