RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 A030003K21RikA0A1Y7VIM3 128 aa6.87□□□□□ -1.31
Cdx1-201ENSMUST00000025521 Lce1eQ9D139 143 aa6.87□□□□□ -1.31
Cdx1-201ENSMUST00000025521 Krtap19-4Q925H7 84 aa6.69□□□□□ -1.34
Cdx1-201ENSMUST00000025521 Gm11564A2A4L9 201 aa6.62□□□□□ -1.35
Cdx1-201ENSMUST00000025521 Gm11595B1AQA7 289 aa6.62□□□□□ -1.35
Cdx1-201ENSMUST00000025521 Krtap4-8B1AQA8 209 aa6.62□□□□□ -1.35
Cdx1-201ENSMUST00000025521 Lce1cQ9D1C5 147 aa6.61□□□□□ -1.35
Cdx1-201ENSMUST00000025521 Lce1bQ9D149 137 aa6.59□□□□□ -1.35
Cdx1-201ENSMUST00000025521 Lce3bQ9CQM7 98 aa6.54□□□□□ -1.36
Cdx1-201ENSMUST00000025521 Syne1Q6ZWR6 8799 aa6.53□□□□□ -1.36
Cdx1-201ENSMUST00000025521 Gm6217A0A1Y7VJK9 128 aa6.53□□□□□ -1.36
Cdx1-201ENSMUST00000025521 Mt4P47945 62 aa6.52□□□□□ -1.37
Cdx1-201ENSMUST00000025521 Krtap4-9B1AQA9 244 aa6.46□□□□□ -1.38
Cdx1-201ENSMUST00000025521 Gm38119A0A0A6YX29 146 aa6.41□□□□□ -1.38
Cdx1-201ENSMUST00000025521 Gm10100J3QK64 120 aa6.39□□□□□ -1.39
Cdx1-201ENSMUST00000025521 Lce1fB9EJP6 147 aa6.34□□□□□ -1.39
Cdx1-201ENSMUST00000025521 Lce1a1Q9CQH5 143 aa6.34□□□□□ -1.39
Cdx1-201ENSMUST00000025521 Gm10142J3KMP7 120 aa6.26□□□□□ -1.41
Cdx1-201ENSMUST00000025521 Fsip2A2ARZ3 6995 aa6.26□□□□□ -1.41
Cdx1-201ENSMUST00000025521 Lce3cQ91V05 98 aa6.23□□□□□ -1.41
Cdx1-201ENSMUST00000025521 2300003K06RikA2A4M0 262 aa6.22□□□□□ -1.41
Cdx1-201ENSMUST00000025521 Sprr2kO70562 68 aa6.21□□□□□ -1.42
Cdx1-201ENSMUST00000025521 Krtap4-13Q9D7P3 165 aa6.21□□□□□ -1.42
Cdx1-201ENSMUST00000025521 Lce3eF8VQJ0 98 aa6.19□□□□□ -1.42
Cdx1-201ENSMUST00000025521 Lce3fQ6PAI4 98 aa6.19□□□□□ -1.42
Cdx1-201ENSMUST00000025521 Lce3dE9Q8V1 98 aa6.16□□□□□ -1.42
Cdx1-201ENSMUST00000025521 Sprr2hO70559 108 aa6.13□□□□□ -1.43
Cdx1-201ENSMUST00000025521 Mt1P02802 61 aaKnown RBP6.06□□□□□ -1.44
Cdx1-201ENSMUST00000025521 Krtap6-3A0A087WQL6 57 aa6.06□□□□□ -1.44
Cdx1-201ENSMUST00000025521 A0A286YCP9 139 aa6.06□□□□□ -1.44
Cdx1-201ENSMUST00000025521 ObscnA2AAJ9 8891 aaKnown RBP6.05□□□□□ -1.44
Cdx1-201ENSMUST00000025521 Sprr2iO70560 76 aa6.03□□□□□ -1.44
Cdx1-201ENSMUST00000025521 Lce1kJ3QP15 125 aa6.01□□□□□ -1.45
Cdx1-201ENSMUST00000025521 Lce1lQ9D1G7 135 aa5.98□□□□□ -1.45
Cdx1-201ENSMUST00000025521 Lce3aQ497I5 98 aa5.93□□□□□ -1.46
Cdx1-201ENSMUST00000025521 Sprr2eO70556 76 aa5.93□□□□□ -1.46
Cdx1-201ENSMUST00000025521 Gm11568A2A4M2 211 aa5.86□□□□□ -1.47
Cdx1-201ENSMUST00000025521 Krtap9-1Q64526 186 aa5.86□□□□□ -1.47
Cdx1-201ENSMUST00000025521 Krtap5-2Q9D5Z7 189 aa5.86□□□□□ -1.47
Cdx1-201ENSMUST00000025521 Krtap20-2E9Q0A8 60 aa5.76□□□□□ -1.49
Cdx1-201ENSMUST00000025521 Sprr2fO70557 76 aa5.62□□□□□ -1.51
Cdx1-201ENSMUST00000025521 Gm10153A0A1B0GRL1 320 aa5.6□□□□□ -1.51
Cdx1-201ENSMUST00000025521 Krtap31-1Q9D644 177 aa5.52□□□□□ -1.53
Cdx1-201ENSMUST00000025521 Mt3P28184 68 aa5.39□□□□□ -1.55
Cdx1-201ENSMUST00000025521 Gm4553A0A1B0GSA9 284 aa5.39□□□□□ -1.55
Cdx1-201ENSMUST00000025521 Gm45337A0A1B0GS71 263 aa5.37□□□□□ -1.55
Cdx1-201ENSMUST00000025521 Gm11559Q9D3H7 191 aa5.29□□□□□ -1.56
Cdx1-201ENSMUST00000025521 Gm40460A0A1B0GR10 244 aa5.24□□□□□ -1.57
Cdx1-201ENSMUST00000025521 Gm7579A0A1B0GRJ4 243 aa5.24□□□□□ -1.57
Cdx1-201ENSMUST00000025521 Krtap5-5Q2TA51 241 aa5.24□□□□□ -1.57
Cdx1-201ENSMUST00000025521 Krtap5-4Q62220 223 aa5.24□□□□□ -1.57
Cdx1-201ENSMUST00000025521 Gm45618A0A1B0GSA0 219 aa5.2□□□□□ -1.58
Cdx1-201ENSMUST00000025521 Gm10024A0A0A0MQA4 119 aa5.19□□□□□ -1.58
Cdx1-201ENSMUST00000025521 Gm2431E9Q8S1 172 aa5.17□□□□□ -1.58
Cdx1-201ENSMUST00000025521 Hmcn1D3YXG0 5634 aa5.11□□□□□ -1.59
Cdx1-201ENSMUST00000025521 Macf1Q9QXZ0 7354 aaKnown RBP5.1□□□□□ -1.59
Cdx1-201ENSMUST00000025521 Krtap4-16Q91W93 202 aa5.07□□□□□ -1.6
Cdx1-201ENSMUST00000025521 Gm11554B1AQB2 190 aa5.04□□□□□ -1.6
Cdx1-201ENSMUST00000025521 Eppk1Q8R0W0 6548 aa5.03□□□□□ -1.6
Cdx1-201ENSMUST00000025521 Gm39115A0A1B0GSH7 232 aa4.96□□□□□ -1.61
Cdx1-201ENSMUST00000025521 Kmt2dQ6PDK2 5588 aa4.93□□□□□ -1.62
Cdx1-201ENSMUST00000025521 Krtap31-2Q8CAY5 177 aa4.81□□□□□ -1.64
Cdx1-201ENSMUST00000025521 Gm11567Q9D141 195 aa4.78□□□□□ -1.64
Cdx1-201ENSMUST00000025521 Gm29735A0A1B0GT06 219 aa4.75□□□□□ -1.65
Cdx1-201ENSMUST00000025521 Gm11639A0A1D5RLM8 5808 aa4.72□□□□□ -1.65
Cdx1-201ENSMUST00000025521 Muc19Q6PZE0 7524 aa4.63□□□□□ -1.67
Cdx1-201ENSMUST00000025521 1110025L11RikO09048 78 aa4.63□□□□□ -1.67
Cdx1-201ENSMUST00000025521 Krtap6-5Q925H3 78 aa4.63□□□□□ -1.67
Cdx1-201ENSMUST00000025521 Muc16A0A140LJ72 8478 aa4.45□□□□□ -1.7
Cdx1-201ENSMUST00000025521 DstQ91ZU6 7393 aaKnown RBP4.44□□□□□ -1.7
Cdx1-201ENSMUST00000025521 Gpr98Q8VHN7 6298 aaKnown RBP4.44□□□□□ -1.7
Cdx1-201ENSMUST00000025521 AhnakE9Q616 5656 aaKnown RBP4.32□□□□□ -1.72
Cdx1-201ENSMUST00000025521 NebE9Q1W3 7152 aa4.27□□□□□ -1.73
Cdx1-201ENSMUST00000025521 Sprr2bO70554 98 aa4.26□□□□□ -1.73
Cdx1-201ENSMUST00000025521 Gm10229O08631 77 aa4.09□□□□□ -1.76
Cdx1-201ENSMUST00000025521 Krtap21-1Q925H4 128 aa3.81□□□□□ -1.8
Cdx1-201ENSMUST00000025521 Phgr1Q8K0G7 91 aa3.61□□□□□ -1.83
Cdx1-201ENSMUST00000025521 Krtap6-2O08884 159 aa3.46□□□□□ -1.86
Cdx1-201ENSMUST00000025521 Krtap5-1Q64507 230 aa3.39□□□□□ -1.87
Cdx1-201ENSMUST00000025521 Gm4559A4IF42 199 aa3.35□□□□□ -1.87
Retrieved 80 of 22,080 RNA–protein pairs in 86.2 ms