RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Gm38119A0A0A6YX29 146 aa4.57□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Fsip2A2ARZ3 6995 aa4.57□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Mt4P47945 62 aa4.56□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Lce3dE9Q8V1 98 aa4.54□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Lce3eF8VQJ0 98 aa4.54□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Lce3fQ6PAI4 98 aa4.54□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Gm11564A2A4L9 201 aa4.53□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Gm11595B1AQA7 289 aa4.53□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Krtap4-8B1AQA8 209 aa4.53□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Gm11596B1AQB0 205 aa4.53□□□□□ -1.68
Nkx3-1-201ENSMUST00000022646 Sprr2hO70559 108 aa4.51□□□□□ -1.69
Nkx3-1-201ENSMUST00000022646 Syne2Q6ZWQ0 6874 aaKnown RBP4.5□□□□□ -1.69
Nkx3-1-201ENSMUST00000022646 Krtap28-10A0A1Y7VP58 119 aa4.47□□□□□ -1.69
Nkx3-1-201ENSMUST00000022646 Lce1bQ9D149 137 aa4.46□□□□□ -1.7
Nkx3-1-201ENSMUST00000022646 Krtap4-9B1AQA9 244 aa4.45□□□□□ -1.7
Nkx3-1-201ENSMUST00000022646 ObscnA2AAJ9 8891 aaKnown RBP4.45□□□□□ -1.7
Nkx3-1-201ENSMUST00000022646 Sprr2iO70560 76 aa4.45□□□□□ -1.7
Nkx3-1-201ENSMUST00000022646 Sprr2eO70556 76 aa4.37□□□□□ -1.71
Nkx3-1-201ENSMUST00000022646 Lce3aQ497I5 98 aa4.35□□□□□ -1.71
Nkx3-1-201ENSMUST00000022646 2300003K06RikA2A4M0 262 aa4.34□□□□□ -1.72
Nkx3-1-201ENSMUST00000022646 Krtap4-13Q9D7P3 165 aa4.31□□□□□ -1.72
Nkx3-1-201ENSMUST00000022646 A030005L19RikA0A1Y7VIU2 113 aa4.3□□□□□ -1.72
Nkx3-1-201ENSMUST00000022646 Gm7544A0A1Y7VJ58 118 aa4.28□□□□□ -1.72
Nkx3-1-201ENSMUST00000022646 Mt1P02802 61 aaKnown RBP4.28□□□□□ -1.72
Nkx3-1-201ENSMUST00000022646 Lce1lQ9D1G7 135 aa4.27□□□□□ -1.73
Nkx3-1-201ENSMUST00000022646 Lce1kJ3QP15 125 aa4.26□□□□□ -1.73
Nkx3-1-201ENSMUST00000022646 Sprr2kO70562 68 aa4.26□□□□□ -1.73
Nkx3-1-201ENSMUST00000022646 Sprr2fO70557 76 aa4.24□□□□□ -1.73
Nkx3-1-201ENSMUST00000022646 Krtap31-1Q9D644 177 aa4.22□□□□□ -1.73
Nkx3-1-201ENSMUST00000022646 A0A1Y7VLE6 161 aa4.2□□□□□ -1.74
Nkx3-1-201ENSMUST00000022646 A030005K14RikA0A1Y7VNY1 122 aa4.12□□□□□ -1.75
Nkx3-1-201ENSMUST00000022646 Krtap28-13A0A087WQP5 138 aa4.08□□□□□ -1.76
Nkx3-1-201ENSMUST00000022646 Gm11568A2A4M2 211 aa4.08□□□□□ -1.76
Nkx3-1-201ENSMUST00000022646 Krtap9-1Q64526 186 aa4.08□□□□□ -1.76
Nkx3-1-201ENSMUST00000022646 Krtap20-2E9Q0A8 60 aa4.01□□□□□ -1.77
Nkx3-1-201ENSMUST00000022646 Krtap4-16Q91W93 202 aa4.01□□□□□ -1.77
Nkx3-1-201ENSMUST00000022646 Krtap5-2Q9D5Z7 189 aa3.93□□□□□ -1.78
Nkx3-1-201ENSMUST00000022646 Krtap31-2Q8CAY5 177 aa3.9□□□□□ -1.79
Nkx3-1-201ENSMUST00000022646 Gm10024A0A0A0MQA4 119 aa3.84□□□□□ -1.79
Nkx3-1-201ENSMUST00000022646 Gm10153A0A1B0GRL1 320 aa3.83□□□□□ -1.8
Nkx3-1-201ENSMUST00000022646 Macf1Q9QXZ0 7354 aaKnown RBP3.82□□□□□ -1.8
Nkx3-1-201ENSMUST00000022646 Krtap6-3A0A087WQL6 57 aa3.79□□□□□ -1.8
Nkx3-1-201ENSMUST00000022646 Muc16A0A140LJ72 8478 aa3.79□□□□□ -1.8
Nkx3-1-201ENSMUST00000022646 Mt3P28184 68 aa3.76□□□□□ -1.81
Nkx3-1-201ENSMUST00000022646 A030003K21RikA0A1Y7VIM3 128 aa3.73□□□□□ -1.81
Nkx3-1-201ENSMUST00000022646 Gm6217A0A1Y7VJK9 128 aa3.73□□□□□ -1.81
Nkx3-1-201ENSMUST00000022646 Hmcn1D3YXG0 5634 aa3.63□□□□□ -1.83
Nkx3-1-201ENSMUST00000022646 A0A286YCP9 139 aa3.61□□□□□ -1.83
Nkx3-1-201ENSMUST00000022646 Kmt2dQ6PDK2 5588 aa3.59□□□□□ -1.83
Nkx3-1-201ENSMUST00000022646 Gm4553A0A1B0GSA9 284 aa3.57□□□□□ -1.84
Nkx3-1-201ENSMUST00000022646 Gm45337A0A1B0GS71 263 aa3.56□□□□□ -1.84
Nkx3-1-201ENSMUST00000022646 Gm11559Q9D3H7 191 aa3.54□□□□□ -1.84
Nkx3-1-201ENSMUST00000022646 Gm11554B1AQB2 190 aa3.49□□□□□ -1.85
Nkx3-1-201ENSMUST00000022646 Gm2431E9Q8S1 172 aa3.48□□□□□ -1.85
Nkx3-1-201ENSMUST00000022646 Gm40460A0A1B0GR10 244 aa3.45□□□□□ -1.86
Nkx3-1-201ENSMUST00000022646 Gm7579A0A1B0GRJ4 243 aa3.45□□□□□ -1.86
Nkx3-1-201ENSMUST00000022646 Krtap5-5Q2TA51 241 aa3.45□□□□□ -1.86
Nkx3-1-201ENSMUST00000022646 Krtap5-4Q62220 223 aa3.45□□□□□ -1.86
Nkx3-1-201ENSMUST00000022646 A0A1Y7VJ07 166 aa3.41□□□□□ -1.86
Nkx3-1-201ENSMUST00000022646 Muc19Q6PZE0 7524 aa3.31□□□□□ -1.88
Nkx3-1-201ENSMUST00000022646 A030014E15RikA0A1Y7VJV2 120 aa3.29□□□□□ -1.88
Nkx3-1-201ENSMUST00000022646 1110025L11RikO09048 78 aa3.29□□□□□ -1.88
Nkx3-1-201ENSMUST00000022646 Krtap6-5Q925H3 78 aa3.29□□□□□ -1.88
Nkx3-1-201ENSMUST00000022646 DstQ91ZU6 7393 aaKnown RBP3.17□□□□□ -1.9
Nkx3-1-201ENSMUST00000022646 Gm39115A0A1B0GSH7 232 aa3.14□□□□□ -1.91
Nkx3-1-201ENSMUST00000022646 Gm11639A0A1D5RLM8 5808 aa3.05□□□□□ -1.92
Nkx3-1-201ENSMUST00000022646 Sprr2bO70554 98 aa2.99□□□□□ -1.93
Nkx3-1-201ENSMUST00000022646 AhnakE9Q616 5656 aaKnown RBP2.96□□□□□ -1.94
Nkx3-1-201ENSMUST00000022646 Gm10229O08631 77 aa2.9□□□□□ -1.94
Nkx3-1-201ENSMUST00000022646 Eppk1Q8R0W0 6548 aa2.89□□□□□ -1.95
Nkx3-1-201ENSMUST00000022646 NebE9Q1W3 7152 aa2.78□□□□□ -1.96
Nkx3-1-201ENSMUST00000022646 Gm11567Q9D141 195 aa2.75□□□□□ -1.97
Nkx3-1-201ENSMUST00000022646 Krtap21-1Q925H4 128 aa2.7□□□□□ -1.98
Nkx3-1-201ENSMUST00000022646 Phgr1Q8K0G7 91 aa2.66□□□□□ -1.98
Nkx3-1-201ENSMUST00000022646 Gm45618A0A1B0GSA0 219 aa2.62□□□□□ -1.99
Nkx3-1-201ENSMUST00000022646 Gm29735A0A1B0GT06 219 aa2.62□□□□□ -1.99
Nkx3-1-201ENSMUST00000022646 Gpr98Q8VHN7 6298 aaKnown RBP2.5□□□□□ -2.01
Nkx3-1-201ENSMUST00000022646 Krtap6-2O08884 159 aa2.44□□□□□ -2.02
Nkx3-1-201ENSMUST00000022646 Krtap5-1Q64507 230 aa1.72□□□□□ -2.13
Nkx3-1-201ENSMUST00000022646 Gm4559A4IF42 199 aa1.59□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 9.9 ms