RNA–Protein interactions for RNA: ENSMUST00000021920.7

Sptlc1-201, Transcript of Serine palmitoyltransferase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptlc1, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1-201ENSMUST00000021920 Krtap19-4Q925H7 84 aa4.71□□□□□ -1.66
Sptlc1-201ENSMUST00000021920 Gm10142J3KMP7 120 aa4.7□□□□□ -1.66
Sptlc1-201ENSMUST00000021920 Gm11559Q9D3H7 191 aa4.65□□□□□ -1.67
Sptlc1-201ENSMUST00000021920 Krtap4-6Q3V4B7 195 aa4.6□□□□□ -1.67
Sptlc1-201ENSMUST00000021920 Lce3cQ91V05 98 aa4.57□□□□□ -1.68
Sptlc1-201ENSMUST00000021920 Lce3dE9Q8V1 98 aa4.54□□□□□ -1.68
Sptlc1-201ENSMUST00000021920 Mdn1A2ANY6 5589 aaKnown RBP4.54□□□□□ -1.68
Sptlc1-201ENSMUST00000021920 Sprr2hO70559 108 aa4.53□□□□□ -1.68
Sptlc1-201ENSMUST00000021920 A0A1Y7VJH8 109 aa4.51□□□□□ -1.69
Sptlc1-201ENSMUST00000021920 Syne1Q6ZWR6 8799 aa4.48□□□□□ -1.69
Sptlc1-201ENSMUST00000021920 Sprr2fO70557 76 aa4.48□□□□□ -1.69
Sptlc1-201ENSMUST00000021920 Sprr2eO70556 76 aa4.47□□□□□ -1.69
Sptlc1-201ENSMUST00000021920 Gm11564A2A4L9 201 aa4.45□□□□□ -1.7
Sptlc1-201ENSMUST00000021920 Gm11595B1AQA7 289 aa4.45□□□□□ -1.7
Sptlc1-201ENSMUST00000021920 Krtap4-8B1AQA8 209 aa4.45□□□□□ -1.7
Sptlc1-201ENSMUST00000021920 Lce3eF8VQJ0 98 aa4.44□□□□□ -1.7
Sptlc1-201ENSMUST00000021920 Lce3fQ6PAI4 98 aa4.44□□□□□ -1.7
Sptlc1-201ENSMUST00000021920 2300003K06RikA2A4M0 262 aa4.39□□□□□ -1.71
Sptlc1-201ENSMUST00000021920 Lce3aQ497I5 98 aa4.37□□□□□ -1.71
Sptlc1-201ENSMUST00000021920 Sprr2kO70562 68 aa4.33□□□□□ -1.72
Sptlc1-201ENSMUST00000021920 Krtap28-10A0A1Y7VP58 119 aa4.3□□□□□ -1.72
Sptlc1-201ENSMUST00000021920 Krtap4-9B1AQA9 244 aa4.29□□□□□ -1.72
Sptlc1-201ENSMUST00000021920 Krtap6-3A0A087WQL6 57 aa4.25□□□□□ -1.73
Sptlc1-201ENSMUST00000021920 ObscnA2AAJ9 8891 aaKnown RBP4.23□□□□□ -1.73
Sptlc1-201ENSMUST00000021920 Krtap4-16Q91W93 202 aa4.22□□□□□ -1.73
Sptlc1-201ENSMUST00000021920 Fsip2A2ARZ3 6995 aa4.18□□□□□ -1.74
Sptlc1-201ENSMUST00000021920 Mt4P47945 62 aa4.16□□□□□ -1.74
Sptlc1-201ENSMUST00000021920 A0A1Y7VLE6 161 aa4.14□□□□□ -1.75
Sptlc1-201ENSMUST00000021920 Krtap4-13Q9D7P3 165 aa4.14□□□□□ -1.75
Sptlc1-201ENSMUST00000021920 Eppk1Q8R0W0 6548 aa4.14□□□□□ -1.75
Sptlc1-201ENSMUST00000021920 Krtap28-13A0A087WQP5 138 aa4.06□□□□□ -1.76
Sptlc1-201ENSMUST00000021920 Lce1lQ9D1G7 135 aa4.04□□□□□ -1.76
Sptlc1-201ENSMUST00000021920 A030005L19RikA0A1Y7VIU2 113 aa4.02□□□□□ -1.77
Sptlc1-201ENSMUST00000021920 Krtap9-1Q64526 186 aa3.98□□□□□ -1.77
Sptlc1-201ENSMUST00000021920 Mt1P02802 61 aaKnown RBP3.96□□□□□ -1.78
Sptlc1-201ENSMUST00000021920 A030005K14RikA0A1Y7VNY1 122 aa3.95□□□□□ -1.78
Sptlc1-201ENSMUST00000021920 Gm7544A0A1Y7VJ58 118 aa3.93□□□□□ -1.78
Sptlc1-201ENSMUST00000021920 Krtap20-2E9Q0A8 60 aa3.9□□□□□ -1.79
Sptlc1-201ENSMUST00000021920 Gm11568A2A4M2 211 aa3.84□□□□□ -1.8
Sptlc1-201ENSMUST00000021920 Lce1kJ3QP15 125 aa3.82□□□□□ -1.8
Sptlc1-201ENSMUST00000021920 Gm10024A0A0A0MQA4 119 aa3.82□□□□□ -1.8
Sptlc1-201ENSMUST00000021920 Gm11639A0A1D5RLM8 5808 aa3.8□□□□□ -1.8
Sptlc1-201ENSMUST00000021920 Gpr98Q8VHN7 6298 aaKnown RBP3.69□□□□□ -1.82
Sptlc1-201ENSMUST00000021920 Muc16A0A140LJ72 8478 aa3.59□□□□□ -1.83
Sptlc1-201ENSMUST00000021920 A0A1Y7VJ07 166 aa3.51□□□□□ -1.85
Sptlc1-201ENSMUST00000021920 Mt3P28184 68 aa3.51□□□□□ -1.85
Sptlc1-201ENSMUST00000021920 A030003K21RikA0A1Y7VIM3 128 aa3.45□□□□□ -1.86
Sptlc1-201ENSMUST00000021920 Gm11554B1AQB2 190 aa3.43□□□□□ -1.86
Sptlc1-201ENSMUST00000021920 Gm10153A0A1B0GRL1 320 aa3.42□□□□□ -1.86
Sptlc1-201ENSMUST00000021920 Macf1Q9QXZ0 7354 aaKnown RBP3.39□□□□□ -1.87
Sptlc1-201ENSMUST00000021920 Krtap5-2Q9D5Z7 189 aa3.39□□□□□ -1.87
Sptlc1-201ENSMUST00000021920 A0A286YCP9 139 aa3.38□□□□□ -1.87
Sptlc1-201ENSMUST00000021920 Kmt2dQ6PDK2 5588 aa3.38□□□□□ -1.87
Sptlc1-201ENSMUST00000021920 Gm6217A0A1Y7VJK9 128 aa3.32□□□□□ -1.88
Sptlc1-201ENSMUST00000021920 A030014E15RikA0A1Y7VJV2 120 aa3.31□□□□□ -1.88
Sptlc1-201ENSMUST00000021920 Muc19Q6PZE0 7524 aa3.29□□□□□ -1.88
Sptlc1-201ENSMUST00000021920 Hmcn1D3YXG0 5634 aa3.26□□□□□ -1.89
Sptlc1-201ENSMUST00000021920 Gm4553A0A1B0GSA9 284 aa3.25□□□□□ -1.89
Sptlc1-201ENSMUST00000021920 Gm2431E9Q8S1 172 aa3.18□□□□□ -1.9
Sptlc1-201ENSMUST00000021920 1110025L11RikO09048 78 aa3.09□□□□□ -1.91
Sptlc1-201ENSMUST00000021920 Krtap6-5Q925H3 78 aa3.09□□□□□ -1.91
Sptlc1-201ENSMUST00000021920 Gm45337A0A1B0GS71 263 aa3.07□□□□□ -1.92
Sptlc1-201ENSMUST00000021920 Gm11567Q9D141 195 aa3.06□□□□□ -1.92
Sptlc1-201ENSMUST00000021920 NebE9Q1W3 7152 aa3.05□□□□□ -1.92
Sptlc1-201ENSMUST00000021920 DstQ91ZU6 7393 aaKnown RBP3.05□□□□□ -1.92
Sptlc1-201ENSMUST00000021920 Gm39115A0A1B0GSH7 232 aa2.99□□□□□ -1.93
Sptlc1-201ENSMUST00000021920 Gm40460A0A1B0GR10 244 aa2.98□□□□□ -1.93
Sptlc1-201ENSMUST00000021920 Gm7579A0A1B0GRJ4 243 aa2.98□□□□□ -1.93
Sptlc1-201ENSMUST00000021920 Krtap5-5Q2TA51 241 aa2.98□□□□□ -1.93
Sptlc1-201ENSMUST00000021920 Krtap5-4Q62220 223 aa2.98□□□□□ -1.93
Sptlc1-201ENSMUST00000021920 Gm45618A0A1B0GSA0 219 aa2.96□□□□□ -1.94
Sptlc1-201ENSMUST00000021920 Sprr2bO70554 98 aa2.91□□□□□ -1.94
Sptlc1-201ENSMUST00000021920 AhnakE9Q616 5656 aaKnown RBP2.83□□□□□ -1.96
Sptlc1-201ENSMUST00000021920 Gm10229O08631 77 aa2.72□□□□□ -1.97
Sptlc1-201ENSMUST00000021920 Phgr1Q8K0G7 91 aa2.66□□□□□ -1.98
Sptlc1-201ENSMUST00000021920 Krtap21-1Q925H4 128 aa2.56□□□□□ -2
Sptlc1-201ENSMUST00000021920 Gm29735A0A1B0GT06 219 aa2.29□□□□□ -2.04
Sptlc1-201ENSMUST00000021920 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Sptlc1-201ENSMUST00000021920 Krtap5-1Q64507 230 aa1.88□□□□□ -2.11
Sptlc1-201ENSMUST00000021920 Gm4559A4IF42 199 aa1.67□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms