RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 2300003K06RikA2A4M0 262 aa6,97□□□□□ -1,29
Trim47-201ENSMUST00000021120 Gm10272F7CZ33 110 aa6,95□□□□□ -1,3
Trim47-201ENSMUST00000021120 Krtap6-3A0A087WQL6 57 aa6,83□□□□□ -1,32
Trim47-201ENSMUST00000021120 Krtap4-7Q9D732 168 aa6,82□□□□□ -1,32
Trim47-201ENSMUST00000021120 Lce1lQ9D1G7 135 aa6,72□□□□□ -1,33
Trim47-201ENSMUST00000021120 Lce3bQ9CQM7 98 aa6,67□□□□□ -1,34
Trim47-201ENSMUST00000021120 Krtap31-1Q9D644 177 aa6,65□□□□□ -1,34
Trim47-201ENSMUST00000021120 Sprr2iO70560 76 aa6,65□□□□□ -1,35
Trim47-201ENSMUST00000021120 Lce1cQ9D1C5 147 aa6,62□□□□□ -1,35
Trim47-201ENSMUST00000021120 Syne1Q6ZWR6 8799 aa6,59□□□□□ -1,35
Trim47-201ENSMUST00000021120 Krtap19-4Q925H7 84 aa6,5□□□□□ -1,37
Trim47-201ENSMUST00000021120 A0A1Y7VJH8 109 aa6,44□□□□□ -1,38
Trim47-201ENSMUST00000021120 Gm10100J3QK64 120 aa6,43□□□□□ -1,38
Trim47-201ENSMUST00000021120 Lce1kJ3QP15 125 aa6,42□□□□□ -1,38
Trim47-201ENSMUST00000021120 Lce1fB9EJP6 147 aa6,38□□□□□ -1,39
Trim47-201ENSMUST00000021120 Krtap20-2E9Q0A8 60 aa6,38□□□□□ -1,39
Trim47-201ENSMUST00000021120 Lce1a1Q9CQH5 143 aa6,38□□□□□ -1,39
Trim47-201ENSMUST00000021120 Gm10142J3KMP7 120 aa6,33□□□□□ -1,4
Trim47-201ENSMUST00000021120 Krtap5-2Q9D5Z7 189 aa6,31□□□□□ -1,4
Trim47-201ENSMUST00000021120 Sprr2fO70557 76 aa6,28□□□□□ -1,4
Trim47-201ENSMUST00000021120 Gm11568A2A4M2 211 aa6,21□□□□□ -1,42
Trim47-201ENSMUST00000021120 Krtap9-1Q64526 186 aa6,21□□□□□ -1,42
Trim47-201ENSMUST00000021120 Lce3cQ91V05 98 aa6,18□□□□□ -1,42
Trim47-201ENSMUST00000021120 Sprr2hO70559 108 aa6,17□□□□□ -1,42
Trim47-201ENSMUST00000021120 Sprr2eO70556 76 aa6,17□□□□□ -1,42
Trim47-201ENSMUST00000021120 Mt1P02802 61 aaKnown RBP6,12□□□□□ -1,43
Trim47-201ENSMUST00000021120 Lce3dE9Q8V1 98 aa6,09□□□□□ -1,43
Trim47-201ENSMUST00000021120 Lce3eF8VQJ0 98 aa6,02□□□□□ -1,45
Trim47-201ENSMUST00000021120 Lce3fQ6PAI4 98 aa6,02□□□□□ -1,45
Trim47-201ENSMUST00000021120 Gm11559Q9D3H7 191 aa5,96□□□□□ -1,46
Trim47-201ENSMUST00000021120 Krtap31-2Q8CAY5 177 aa5,94□□□□□ -1,46
Trim47-201ENSMUST00000021120 Gm4553A0A1B0GSA9 284 aa5,91□□□□□ -1,46
Trim47-201ENSMUST00000021120 Lce3aQ497I5 98 aa5,87□□□□□ -1,47
Trim47-201ENSMUST00000021120 Gm10153A0A1B0GRL1 320 aa5,84□□□□□ -1,47
Trim47-201ENSMUST00000021120 Macf1Q9QXZ0 7354 aaKnown RBP5,84□□□□□ -1,48
Trim47-201ENSMUST00000021120 ObscnA2AAJ9 8891 aaKnown RBP5,82□□□□□ -1,48
Trim47-201ENSMUST00000021120 Gm11554B1AQB2 190 aa5,8□□□□□ -1,48
Trim47-201ENSMUST00000021120 Gm45337A0A1B0GS71 263 aa5,76□□□□□ -1,49
Trim47-201ENSMUST00000021120 Gm2431E9Q8S1 172 aa5,71□□□□□ -1,49
Trim47-201ENSMUST00000021120 Krtap4-16Q91W93 202 aa5,66□□□□□ -1,5
Trim47-201ENSMUST00000021120 A030005L19RikA0A1Y7VIU2 113 aa5,62□□□□□ -1,51
Trim47-201ENSMUST00000021120 Hmcn1D3YXG0 5634 aa5,59□□□□□ -1,51
Trim47-201ENSMUST00000021120 Kmt2dQ6PDK2 5588 aa5,58□□□□□ -1,52
Trim47-201ENSMUST00000021120 Gm40460A0A1B0GR10 244 aa5,58□□□□□ -1,52
Trim47-201ENSMUST00000021120 Gm7579A0A1B0GRJ4 243 aa5,58□□□□□ -1,52
Trim47-201ENSMUST00000021120 Krtap5-5Q2TA51 241 aa5,58□□□□□ -1,52
Trim47-201ENSMUST00000021120 Krtap5-4Q62220 223 aa5,58□□□□□ -1,52
Trim47-201ENSMUST00000021120 Mt3P28184 68 aa5,55□□□□□ -1,52
Trim47-201ENSMUST00000021120 Eppk1Q8R0W0 6548 aa5,38□□□□□ -1,55
Trim47-201ENSMUST00000021120 Gm39115A0A1B0GSH7 232 aa5,33□□□□□ -1,56
Trim47-201ENSMUST00000021120 A0A1Y7VLE6 161 aa5,32□□□□□ -1,56
Trim47-201ENSMUST00000021120 Muc19Q6PZE0 7524 aa5,18□□□□□ -1,58
Trim47-201ENSMUST00000021120 DstQ91ZU6 7393 aaKnown RBP5,11□□□□□ -1,59
Trim47-201ENSMUST00000021120 Gm11639A0A1D5RLM8 5808 aa5,11□□□□□ -1,59
Trim47-201ENSMUST00000021120 Gm10024A0A0A0MQA4 119 aa5,1□□□□□ -1,59
Trim47-201ENSMUST00000021120 Gpr98Q8VHN7 6298 aaKnown RBP4,82□□□□□ -1,64
Trim47-201ENSMUST00000021120 Gm45618A0A1B0GSA0 219 aa4,78□□□□□ -1,64
Trim47-201ENSMUST00000021120 AhnakE9Q616 5656 aaKnown RBP4,77□□□□□ -1,65
Trim47-201ENSMUST00000021120 NebE9Q1W3 7152 aa4,73□□□□□ -1,65
Trim47-201ENSMUST00000021120 1110025L11RikO09048 78 aa4,54□□□□□ -1,68
Trim47-201ENSMUST00000021120 Krtap6-5Q925H3 78 aa4,54□□□□□ -1,68
Trim47-201ENSMUST00000021120 Muc16A0A140LJ72 8478 aa4,51□□□□□ -1,69
Trim47-201ENSMUST00000021120 A0A1Y7VJ07 166 aa4,36□□□□□ -1,71
Trim47-201ENSMUST00000021120 Gm29735A0A1B0GT06 219 aa4,17□□□□□ -1,74
Trim47-201ENSMUST00000021120 Sprr2bO70554 98 aa4,11□□□□□ -1,75
Trim47-201ENSMUST00000021120 Gm10229O08631 77 aa4,05□□□□□ -1,76
Trim47-201ENSMUST00000021120 Gm11567Q9D141 195 aa4,04□□□□□ -1,76
Trim47-201ENSMUST00000021120 Krtap21-1Q925H4 128 aa3,68□□□□□ -1,82
Trim47-201ENSMUST00000021120 A0A286YCP9 139 aa3,62□□□□□ -1,83
Trim47-201ENSMUST00000021120 Phgr1Q8K0G7 91 aa3,61□□□□□ -1,83
Trim47-201ENSMUST00000021120 Krtap6-2O08884 159 aa3,51□□□□□ -1,85
Trim47-201ENSMUST00000021120 A030003K21RikA0A1Y7VIM3 128 aa2,91□□□□□ -1,94
Trim47-201ENSMUST00000021120 Krtap5-1Q64507 230 aa2,87□□□□□ -1,95
Trim47-201ENSMUST00000021120 Krtap28-10A0A1Y7VP58 119 aa2,61□□□□□ -1,99
Trim47-201ENSMUST00000021120 Gm7544A0A1Y7VJ58 118 aa2,53□□□□□ -2
Trim47-201ENSMUST00000021120 Gm4559A4IF42 199 aa2,38□□□□□ -2,03
Trim47-201ENSMUST00000021120 A030005K14RikA0A1Y7VNY1 122 aa2,26□□□□□ -2,05
Trim47-201ENSMUST00000021120 Gm6217A0A1Y7VJK9 128 aa2,25□□□□□ -2,05
Trim47-201ENSMUST00000021120 Krtap28-13A0A087WQP5 138 aa2,13□□□□□ -2,07
Trim47-201ENSMUST00000021120 A030014E15RikA0A1Y7VJV2 120 aa1,53□□□□□ -2,16
Retrieved 80 of 22,080 RNA–protein pairs in 44,4 ms