RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Lce1iQ9D6P5 149 aa1.73□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1hQ9D6R3 140 aa1.73□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Gpr98Q8VHN7 6298 aaKnown RBP1.72□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Gm11569B1AQB1 180 aa1.72□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Sprr2eO70556 76 aa1.72□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Kmt2dQ6PDK2 5588 aa1.69□□□□□ -2.14
Vps13d-201ENSMUST00000020441 Gm11562A0PK51 136 aa1.69□□□□□ -2.14
Vps13d-201ENSMUST00000020441 Gm11938Q9D3H4 131 aa1.69□□□□□ -2.14
Vps13d-201ENSMUST00000020441 Krtap31-1Q9D644 177 aa1.64□□□□□ -2.15
Vps13d-201ENSMUST00000020441 Krtap31-2Q8CAY5 177 aa1.63□□□□□ -2.15
Vps13d-201ENSMUST00000020441 DstQ91ZU6 7393 aaKnown RBP1.61□□□□□ -2.15
Vps13d-201ENSMUST00000020441 Mt4P47945 62 aa1.6□□□□□ -2.15
Vps13d-201ENSMUST00000020441 Hmcn1D3YXG0 5634 aa1.6□□□□□ -2.15
Vps13d-201ENSMUST00000020441 Krtap4-2B1AQ85 167 aa1.58□□□□□ -2.16
Vps13d-201ENSMUST00000020441 Mt3P28184 68 aa1.58□□□□□ -2.16
Vps13d-201ENSMUST00000020441 Lce1a2Q9D1K4 149 aa1.57□□□□□ -2.16
Vps13d-201ENSMUST00000020441 Mt1P02802 61 aaKnown RBP1.57□□□□□ -2.16
Vps13d-201ENSMUST00000020441 Krtap4-6Q3V4B7 195 aa1.53□□□□□ -2.16
Vps13d-201ENSMUST00000020441 Sprr2bO70554 98 aa1.52□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Syne1Q6ZWR6 8799 aa1.5□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Gm11596B1AQB0 205 aa1.5□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Krtap17-1A2A5X6 109 aa1.49□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Krtap4-7Q9D732 168 aa1.49□□□□□ -2.17
Vps13d-201ENSMUST00000020441 2300003K06RikA2A4M0 262 aa1.48□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Lce1kJ3QP15 125 aa1.48□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Krtap4-1Q3UUY3 169 aa1.48□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Macf1Q9QXZ0 7354 aaKnown RBP1.48□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Gm11564A2A4L9 201 aa1.47□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Gm11563B1AQ90 168 aa1.47□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Gm11595B1AQA7 289 aa1.47□□□□□ -2.17
Vps13d-201ENSMUST00000020441 Krtap4-8B1AQA8 209 aa1.47□□□□□ -2.17
Vps13d-201ENSMUST00000020441 AhnakE9Q616 5656 aaKnown RBP1.46□□□□□ -2.18
Vps13d-201ENSMUST00000020441 Krtap4-9B1AQA9 244 aa1.45□□□□□ -2.18
Vps13d-201ENSMUST00000020441 Krtap6-3A0A087WQL6 57 aa1.44□□□□□ -2.18
Vps13d-201ENSMUST00000020441 Krtap4-13Q9D7P3 165 aa1.4□□□□□ -2.19
Vps13d-201ENSMUST00000020441 NebE9Q1W3 7152 aa1.4□□□□□ -2.19
Vps13d-201ENSMUST00000020441 Lce1a1Q9CQH5 143 aa1.36□□□□□ -2.19
Vps13d-201ENSMUST00000020441 ObscnA2AAJ9 8891 aaKnown RBP1.34□□□□□ -2.2
Vps13d-201ENSMUST00000020441 Krtap4-16Q91W93 202 aa1.32□□□□□ -2.2
Vps13d-201ENSMUST00000020441 Krtap20-2E9Q0A8 60 aa1.32□□□□□ -2.2
Vps13d-201ENSMUST00000020441 Muc16A0A140LJ72 8478 aa1.29□□□□□ -2.2
Vps13d-201ENSMUST00000020441 Gm11555B1AQ89 175 aa1.24□□□□□ -2.21
Vps13d-201ENSMUST00000020441 Gm11554B1AQB2 190 aa1.23□□□□□ -2.21
Vps13d-201ENSMUST00000020441 1110025L11RikO09048 78 aa1.21□□□□□ -2.22
Vps13d-201ENSMUST00000020441 Krtap6-5Q925H3 78 aa1.21□□□□□ -2.22
Vps13d-201ENSMUST00000020441 Muc19Q6PZE0 7524 aa1.18□□□□□ -2.22
Vps13d-201ENSMUST00000020441 Gm10229O08631 77 aa1.13□□□□□ -2.23
Vps13d-201ENSMUST00000020441 Gm11559Q9D3H7 191 aa1.1□□□□□ -2.23
Vps13d-201ENSMUST00000020441 A0A1Y7VJH8 109 aa1.07□□□□□ -2.24
Vps13d-201ENSMUST00000020441 Krtap5-2Q9D5Z7 189 aa1.04□□□□□ -2.24
Vps13d-201ENSMUST00000020441 Gm11568A2A4M2 211 aa1.02□□□□□ -2.25
Vps13d-201ENSMUST00000020441 Krtap9-1Q64526 186 aa1.02□□□□□ -2.25
Vps13d-201ENSMUST00000020441 Phgr1Q8K0G7 91 aa0.99□□□□□ -2.25
Vps13d-201ENSMUST00000020441 Gm4553A0A1B0GSA9 284 aa0.97□□□□□ -2.25
Vps13d-201ENSMUST00000020441 Gm40460A0A1B0GR10 244 aa0.96□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Gm7579A0A1B0GRJ4 243 aa0.96□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Krtap5-5Q2TA51 241 aa0.96□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Krtap5-4Q62220 223 aa0.96□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Gm10153A0A1B0GRL1 320 aa0.95□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Gm11567Q9D141 195 aa0.94□□□□□ -2.26
Vps13d-201ENSMUST00000020441 A0A1Y7VLE6 161 aa0.93□□□□□ -2.26
Vps13d-201ENSMUST00000020441 A030005L19RikA0A1Y7VIU2 113 aa0.93□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Gm45337A0A1B0GS71 263 aa0.92□□□□□ -2.26
Vps13d-201ENSMUST00000020441 Krtap6-2O08884 159 aa0.9□□□□□ -2.27
Vps13d-201ENSMUST00000020441 Gm2431E9Q8S1 172 aa0.9□□□□□ -2.27
Vps13d-201ENSMUST00000020441 Krtap21-1Q925H4 128 aa0.85□□□□□ -2.27
Vps13d-201ENSMUST00000020441 Gm39115A0A1B0GSH7 232 aa0.84□□□□□ -2.28
Vps13d-201ENSMUST00000020441 Gm45618A0A1B0GSA0 219 aa0.74□□□□□ -2.29
Vps13d-201ENSMUST00000020441 A0A1Y7VJ07 166 aa0.73□□□□□ -2.29
Vps13d-201ENSMUST00000020441 Gm29735A0A1B0GT06 219 aa0.71□□□□□ -2.3
Vps13d-201ENSMUST00000020441 A0A286YCP9 139 aa0.67□□□□□ -2.3
Vps13d-201ENSMUST00000020441 Krtap28-13A0A087WQP5 138 aa0.58□□□□□ -2.32
Vps13d-201ENSMUST00000020441 Gm7544A0A1Y7VJ58 118 aa0.55□□□□□ -2.32
Vps13d-201ENSMUST00000020441 A030005K14RikA0A1Y7VNY1 122 aa0.53□□□□□ -2.32
Vps13d-201ENSMUST00000020441 A030003K21RikA0A1Y7VIM3 128 aa0.5□□□□□ -2.33
Vps13d-201ENSMUST00000020441 Gm6217A0A1Y7VJK9 128 aa0.5□□□□□ -2.33
Vps13d-201ENSMUST00000020441 Krtap28-10A0A1Y7VP58 119 aa0.48□□□□□ -2.33
Vps13d-201ENSMUST00000020441 Krtap5-1Q64507 230 aa0.45□□□□□ -2.34
Vps13d-201ENSMUST00000020441 A030014E15RikA0A1Y7VJV2 120 aa0.45□□□□□ -2.34
Vps13d-201ENSMUST00000020441 Gm4559A4IF42 199 aa0.41□□□□□ -2.34
Retrieved 80 of 22,080 RNA–protein pairs in 9.4 ms