RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Krtap19-9bQ99NG9 58 aa6.42□□□□□ -1.38
Trim54-201ENSMUST00000013771 Krtap5-2Q9D5Z7 189 aa6.42□□□□□ -1.38
Trim54-201ENSMUST00000013771 Gm11559Q9D3H7 191 aa6.41□□□□□ -1.38
Trim54-201ENSMUST00000013771 A030005L19RikA0A1Y7VIU2 113 aa6.38□□□□□ -1.39
Trim54-201ENSMUST00000013771 Gm20538F6Z9R1 75 aa6.35□□□□□ -1.39
Trim54-201ENSMUST00000013771 Tnp1P10856 55 aa6.35□□□□□ -1.39
Trim54-201ENSMUST00000013771 Sprr2iO70560 76 aa6.34□□□□□ -1.39
Trim54-201ENSMUST00000013771 Gm11554B1AQB2 190 aa6.33□□□□□ -1.4
Trim54-201ENSMUST00000013771 Lce1kJ3QP15 125 aa6.31□□□□□ -1.4
Trim54-201ENSMUST00000013771 Gm11639A0A1D5RLM8 5808 aa6.27□□□□□ -1.41
Trim54-201ENSMUST00000013771 Macf1Q9QXZ0 7354 aaKnown RBP6.22□□□□□ -1.41
Trim54-201ENSMUST00000013771 Kmt2dQ6PDK2 5588 aa6.18□□□□□ -1.42
Trim54-201ENSMUST00000013771 Gm4553A0A1B0GSA9 284 aa6.17□□□□□ -1.42
Trim54-201ENSMUST00000013771 Gm11568A2A4M2 211 aa6.1□□□□□ -1.43
Trim54-201ENSMUST00000013771 Krtap9-1Q64526 186 aa6.1□□□□□ -1.43
Trim54-201ENSMUST00000013771 Syne1Q6ZWR6 8799 aa6.07□□□□□ -1.44
Trim54-201ENSMUST00000013771 Lce3bQ9CQM7 98 aa6.03□□□□□ -1.44
Trim54-201ENSMUST00000013771 Gpr98Q8VHN7 6298 aaKnown RBP6□□□□□ -1.45
Trim54-201ENSMUST00000013771 Ndufaf8A2AMZ4 74 aa5.99□□□□□ -1.45
Trim54-201ENSMUST00000013771 Gm2431E9Q8S1 172 aa5.99□□□□□ -1.45
Trim54-201ENSMUST00000013771 Muc19Q6PZE0 7524 aa5.97□□□□□ -1.45
Trim54-201ENSMUST00000013771 Gm45337A0A1B0GS71 263 aa5.86□□□□□ -1.47
Trim54-201ENSMUST00000013771 Lce1fB9EJP6 147 aa5.85□□□□□ -1.47
Trim54-201ENSMUST00000013771 Gm10272F7CZ33 110 aa5.85□□□□□ -1.47
Trim54-201ENSMUST00000013771 Lce1cQ9D1C5 147 aa5.85□□□□□ -1.47
Trim54-201ENSMUST00000013771 Hmcn1D3YXG0 5634 aa5.74□□□□□ -1.49
Trim54-201ENSMUST00000013771 Krtap19-4Q925H7 84 aa5.68□□□□□ -1.5
Trim54-201ENSMUST00000013771 Gm10153A0A1B0GRL1 320 aa5.65□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm40460A0A1B0GR10 244 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm7579A0A1B0GRJ4 243 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Krtap5-5Q2TA51 241 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Krtap5-4Q62220 223 aa5.64□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm39115A0A1B0GSH7 232 aa5.63□□□□□ -1.51
Trim54-201ENSMUST00000013771 Gm11938Q9D3H4 131 aa5.57□□□□□ -1.52
Trim54-201ENSMUST00000013771 DstQ91ZU6 7393 aaKnown RBP5.57□□□□□ -1.52
Trim54-201ENSMUST00000013771 Mt1P02802 61 aaKnown RBP5.54□□□□□ -1.52
Trim54-201ENSMUST00000013771 NebE9Q1W3 7152 aa5.5□□□□□ -1.53
Trim54-201ENSMUST00000013771 Krtap4-16Q91W93 202 aa5.47□□□□□ -1.53
Trim54-201ENSMUST00000013771 Sprr2dO70555 85 aa5.35□□□□□ -1.55
Trim54-201ENSMUST00000013771 Sprr2fO70557 76 aa5.34□□□□□ -1.55
Trim54-201ENSMUST00000013771 Gm45618A0A1B0GSA0 219 aa5.32□□□□□ -1.56
Trim54-201ENSMUST00000013771 Lce3cQ91V05 98 aa5.31□□□□□ -1.56
Trim54-201ENSMUST00000013771 4933428G20RikQ9D3X4 101 aa5.28□□□□□ -1.56
Trim54-201ENSMUST00000013771 Gm9112A2AI92 75 aa5.26□□□□□ -1.57
Trim54-201ENSMUST00000013771 Lce3dE9Q8V1 98 aa5.21□□□□□ -1.58
Trim54-201ENSMUST00000013771 AhnakE9Q616 5656 aaKnown RBP5.19□□□□□ -1.58
Trim54-201ENSMUST00000013771 Mt3P28184 68 aa5.18□□□□□ -1.58
Trim54-201ENSMUST00000013771 Lce3eF8VQJ0 98 aa5□□□□□ -1.61
Trim54-201ENSMUST00000013771 Lce3fQ6PAI4 98 aa5□□□□□ -1.61
Trim54-201ENSMUST00000013771 ObscnA2AAJ9 8891 aaKnown RBP4.98□□□□□ -1.61
Trim54-201ENSMUST00000013771 Gm10100J3QK64 120 aa4.88□□□□□ -1.63
Trim54-201ENSMUST00000013771 A0A1Y7VLE6 161 aa4.81□□□□□ -1.64
Trim54-201ENSMUST00000013771 Lce3aQ497I5 98 aa4.78□□□□□ -1.64
Trim54-201ENSMUST00000013771 Gm10142J3KMP7 120 aa4.73□□□□□ -1.65
Trim54-201ENSMUST00000013771 Sprr2hO70559 108 aa4.62□□□□□ -1.67
Trim54-201ENSMUST00000013771 Sprr2eO70556 76 aa4.58□□□□□ -1.68
Trim54-201ENSMUST00000013771 Gm10024A0A0A0MQA4 119 aa4.38□□□□□ -1.71
Trim54-201ENSMUST00000013771 Muc16A0A140LJ72 8478 aa4.2□□□□□ -1.74
Trim54-201ENSMUST00000013771 A0A1Y7VJ07 166 aa4.13□□□□□ -1.75
Trim54-201ENSMUST00000013771 Gm29735A0A1B0GT06 219 aa4.12□□□□□ -1.75
Trim54-201ENSMUST00000013771 Krtap31-1Q9D644 177 aa4.11□□□□□ -1.75
Trim54-201ENSMUST00000013771 1110025L11RikO09048 78 aa3.89□□□□□ -1.79
Trim54-201ENSMUST00000013771 Krtap6-5Q925H3 78 aa3.89□□□□□ -1.79
Trim54-201ENSMUST00000013771 Gm11567Q9D141 195 aa3.85□□□□□ -1.79
Trim54-201ENSMUST00000013771 Gm10229O08631 77 aa3.53□□□□□ -1.85
Trim54-201ENSMUST00000013771 A030003K21RikA0A1Y7VIM3 128 aa3.42□□□□□ -1.86
Trim54-201ENSMUST00000013771 Sprr2bO70554 98 aa3.35□□□□□ -1.87
Trim54-201ENSMUST00000013771 Krtap5-1Q64507 230 aa3.34□□□□□ -1.88
Trim54-201ENSMUST00000013771 Krtap31-2Q8CAY5 177 aa3.3□□□□□ -1.88
Trim54-201ENSMUST00000013771 Krtap28-10A0A1Y7VP58 119 aa3.21□□□□□ -1.9
Trim54-201ENSMUST00000013771 Krtap6-2O08884 159 aa3.19□□□□□ -1.9
Trim54-201ENSMUST00000013771 Krtap21-1Q925H4 128 aa3.12□□□□□ -1.91
Trim54-201ENSMUST00000013771 A0A286YCP9 139 aa2.79□□□□□ -1.96
Trim54-201ENSMUST00000013771 Phgr1Q8K0G7 91 aa2.72□□□□□ -1.97
Trim54-201ENSMUST00000013771 Gm6217A0A1Y7VJK9 128 aa2.56□□□□□ -2
Trim54-201ENSMUST00000013771 Gm4559A4IF42 199 aa2.39□□□□□ -2.03
Trim54-201ENSMUST00000013771 A030005K14RikA0A1Y7VNY1 122 aa1.47□□□□□ -2.17
Trim54-201ENSMUST00000013771 Krtap28-13A0A087WQP5 138 aa1.4□□□□□ -2.18
Trim54-201ENSMUST00000013771 A030014E15RikA0A1Y7VJV2 120 aa1.18□□□□□ -2.22
Trim54-201ENSMUST00000013771 Gm7544A0A1Y7VJ58 118 aa0.92□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 248.9 ms