RNA–Protein interactions for RNA: ENSMUST00000006476.5

Upk1a-201, Transcript of Uroplakin-1a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk1a, Length 1,421 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1a-201ENSMUST00000006476 Gm10272F7CZ33 110 aa5.1□□□□□ -1.59
Upk1a-201ENSMUST00000006476 Gm11639A0A1D5RLM8 5808 aa4.97□□□□□ -1.61
Upk1a-201ENSMUST00000006476 Lce3bQ9CQM7 98 aa4.96□□□□□ -1.62
Upk1a-201ENSMUST00000006476 Lce1dQ9D731 133 aa4.96□□□□□ -1.62
Upk1a-201ENSMUST00000006476 Syne1Q6ZWR6 8799 aa4.92□□□□□ -1.62
Upk1a-201ENSMUST00000006476 A0A1Y7VJH8 109 aa4.91□□□□□ -1.62
Upk1a-201ENSMUST00000006476 Gm11938Q9D3H4 131 aa4.9□□□□□ -1.62
Upk1a-201ENSMUST00000006476 Sprr2iO70560 76 aa4.86□□□□□ -1.63
Upk1a-201ENSMUST00000006476 Gpr98Q8VHN7 6298 aaKnown RBP4.83□□□□□ -1.64
Upk1a-201ENSMUST00000006476 A030005L19RikA0A1Y7VIU2 113 aa4.82□□□□□ -1.64
Upk1a-201ENSMUST00000006476 Gm11554B1AQB2 190 aa4.82□□□□□ -1.64
Upk1a-201ENSMUST00000006476 Krtap5-2Q9D5Z7 189 aa4.82□□□□□ -1.64
Upk1a-201ENSMUST00000006476 Macf1Q9QXZ0 7354 aaKnown RBP4.82□□□□□ -1.64
Upk1a-201ENSMUST00000006476 Lce1kJ3QP15 125 aa4.8□□□□□ -1.64
Upk1a-201ENSMUST00000006476 Gm11559Q9D3H7 191 aa4.8□□□□□ -1.64
Upk1a-201ENSMUST00000006476 Kmt2dQ6PDK2 5588 aa4.7□□□□□ -1.66
Upk1a-201ENSMUST00000006476 Gm20538F6Z9R1 75 aa4.68□□□□□ -1.66
Upk1a-201ENSMUST00000006476 Gm11568A2A4M2 211 aa4.66□□□□□ -1.66
Upk1a-201ENSMUST00000006476 Krtap9-1Q64526 186 aa4.66□□□□□ -1.66
Upk1a-201ENSMUST00000006476 Sprr2dO70555 85 aa4.64□□□□□ -1.67
Upk1a-201ENSMUST00000006476 Muc19Q6PZE0 7524 aa4.64□□□□□ -1.67
Upk1a-201ENSMUST00000006476 Lce1fB9EJP6 147 aa4.63□□□□□ -1.67
Upk1a-201ENSMUST00000006476 Lce1cQ9D1C5 147 aa4.63□□□□□ -1.67
Upk1a-201ENSMUST00000006476 Mt1P02802 61 aaKnown RBP4.57□□□□□ -1.68
Upk1a-201ENSMUST00000006476 Lce3cQ91V05 98 aa4.56□□□□□ -1.68
Upk1a-201ENSMUST00000006476 Krtap19-4Q925H7 84 aa4.56□□□□□ -1.68
Upk1a-201ENSMUST00000006476 Gm4553A0A1B0GSA9 284 aa4.55□□□□□ -1.68
Upk1a-201ENSMUST00000006476 Lce3dE9Q8V1 98 aa4.5□□□□□ -1.69
Upk1a-201ENSMUST00000006476 Gm2431E9Q8S1 172 aa4.48□□□□□ -1.69
Upk1a-201ENSMUST00000006476 Gm10153A0A1B0GRL1 320 aa4.43□□□□□ -1.7
Upk1a-201ENSMUST00000006476 Gm45337A0A1B0GS71 263 aa4.43□□□□□ -1.7
Upk1a-201ENSMUST00000006476 Lce3eF8VQJ0 98 aa4.43□□□□□ -1.7
Upk1a-201ENSMUST00000006476 Lce3fQ6PAI4 98 aa4.43□□□□□ -1.7
Upk1a-201ENSMUST00000006476 ObscnA2AAJ9 8891 aaKnown RBP4.36□□□□□ -1.71
Upk1a-201ENSMUST00000006476 4933428G20RikQ9D3X4 101 aa4.33□□□□□ -1.72
Upk1a-201ENSMUST00000006476 Gm40460A0A1B0GR10 244 aa4.29□□□□□ -1.72
Upk1a-201ENSMUST00000006476 Gm7579A0A1B0GRJ4 243 aa4.29□□□□□ -1.72
Upk1a-201ENSMUST00000006476 Krtap5-5Q2TA51 241 aa4.29□□□□□ -1.72
Upk1a-201ENSMUST00000006476 Krtap5-4Q62220 223 aa4.29□□□□□ -1.72
Upk1a-201ENSMUST00000006476 NebE9Q1W3 7152 aa4.27□□□□□ -1.73
Upk1a-201ENSMUST00000006476 DstQ91ZU6 7393 aaKnown RBP4.26□□□□□ -1.73
Upk1a-201ENSMUST00000006476 Lce3aQ497I5 98 aa4.25□□□□□ -1.73
Upk1a-201ENSMUST00000006476 Hmcn1D3YXG0 5634 aa4.24□□□□□ -1.73
Upk1a-201ENSMUST00000006476 Ndufaf8A2AMZ4 74 aa4.24□□□□□ -1.73
Upk1a-201ENSMUST00000006476 Gm10100J3QK64 120 aa4.22□□□□□ -1.73
Upk1a-201ENSMUST00000006476 Mt3P28184 68 aa4.19□□□□□ -1.74
Upk1a-201ENSMUST00000006476 Krtap4-16Q91W93 202 aa4.19□□□□□ -1.74
Upk1a-201ENSMUST00000006476 Gm39115A0A1B0GSH7 232 aa4.16□□□□□ -1.74
Upk1a-201ENSMUST00000006476 Gm10142J3KMP7 120 aa4.1□□□□□ -1.75
Upk1a-201ENSMUST00000006476 Gm45618A0A1B0GSA0 219 aa4□□□□□ -1.77
Upk1a-201ENSMUST00000006476 A0A1Y7VLE6 161 aa4□□□□□ -1.77
Upk1a-201ENSMUST00000006476 Sprr2hO70559 108 aa3.99□□□□□ -1.77
Upk1a-201ENSMUST00000006476 Sprr2fO70557 76 aa3.94□□□□□ -1.78
Upk1a-201ENSMUST00000006476 AhnakE9Q616 5656 aaKnown RBP3.92□□□□□ -1.78
Upk1a-201ENSMUST00000006476 Sprr2eO70556 76 aa3.69□□□□□ -1.82
Upk1a-201ENSMUST00000006476 Gm10024A0A0A0MQA4 119 aa3.68□□□□□ -1.82
Upk1a-201ENSMUST00000006476 Gm9112A2AI92 75 aa3.45□□□□□ -1.86
Upk1a-201ENSMUST00000006476 1110025L11RikO09048 78 aa3.39□□□□□ -1.87
Upk1a-201ENSMUST00000006476 Krtap6-5Q925H3 78 aa3.39□□□□□ -1.87
Upk1a-201ENSMUST00000006476 Krtap31-1Q9D644 177 aa3.36□□□□□ -1.87
Upk1a-201ENSMUST00000006476 A0A1Y7VJ07 166 aa3.3□□□□□ -1.88
Upk1a-201ENSMUST00000006476 Krtap28-13A0A087WQP5 138 aa3.21□□□□□ -1.9
Upk1a-201ENSMUST00000006476 Gm29735A0A1B0GT06 219 aa3.2□□□□□ -1.9
Upk1a-201ENSMUST00000006476 Krtap28-10A0A1Y7VP58 119 aa3.19□□□□□ -1.9
Upk1a-201ENSMUST00000006476 A030005K14RikA0A1Y7VNY1 122 aa3.18□□□□□ -1.9
Upk1a-201ENSMUST00000006476 Muc16A0A140LJ72 8478 aa3.15□□□□□ -1.91
Upk1a-201ENSMUST00000006476 Gm10229O08631 77 aa3.02□□□□□ -1.93
Upk1a-201ENSMUST00000006476 Gm11567Q9D141 195 aa3.02□□□□□ -1.93
Upk1a-201ENSMUST00000006476 A030014E15RikA0A1Y7VJV2 120 aa2.93□□□□□ -1.94
Upk1a-201ENSMUST00000006476 Sprr2bO70554 98 aa2.89□□□□□ -1.95
Upk1a-201ENSMUST00000006476 Gm7544A0A1Y7VJ58 118 aa2.85□□□□□ -1.95
Upk1a-201ENSMUST00000006476 A030003K21RikA0A1Y7VIM3 128 aa2.83□□□□□ -1.96
Upk1a-201ENSMUST00000006476 Krtap21-1Q925H4 128 aa2.76□□□□□ -1.97
Upk1a-201ENSMUST00000006476 Krtap31-2Q8CAY5 177 aa2.67□□□□□ -1.98
Upk1a-201ENSMUST00000006476 Krtap6-2O08884 159 aa2.63□□□□□ -1.99
Upk1a-201ENSMUST00000006476 Krtap5-1Q64507 230 aa2.59□□□□□ -1.99
Upk1a-201ENSMUST00000006476 A0A286YCP9 139 aa2.42□□□□□ -2.02
Upk1a-201ENSMUST00000006476 Phgr1Q8K0G7 91 aa2.39□□□□□ -2.03
Upk1a-201ENSMUST00000006476 Gm6217A0A1Y7VJK9 128 aa2.21□□□□□ -2.06
Upk1a-201ENSMUST00000006476 Gm4559A4IF42 199 aa1.83□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 11.4 ms