RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Lce3dE9Q8V1 98 aa3.75□□□□□ -1.81
Rfx1-201ENSMUST00000005600 Sprr2iO70560 76 aa3.75□□□□□ -1.81
Rfx1-201ENSMUST00000005600 Gm11596B1AQB0 205 aa3.71□□□□□ -1.81
Rfx1-201ENSMUST00000005600 Mt4P47945 62 aa3.71□□□□□ -1.82
Rfx1-201ENSMUST00000005600 Krtap4-1Q3UUY3 169 aa3.7□□□□□ -1.82
Rfx1-201ENSMUST00000005600 Syne2Q6ZWQ0 6874 aaKnown RBP3.68□□□□□ -1.82
Rfx1-201ENSMUST00000005600 Lce3eF8VQJ0 98 aa3.66□□□□□ -1.82
Rfx1-201ENSMUST00000005600 Lce3fQ6PAI4 98 aa3.66□□□□□ -1.82
Rfx1-201ENSMUST00000005600 Sprr2hO70559 108 aa3.66□□□□□ -1.82
Rfx1-201ENSMUST00000005600 Gm11564A2A4L9 201 aa3.61□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Gm11563B1AQ90 168 aa3.61□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Gm11595B1AQA7 289 aa3.61□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Krtap4-8B1AQA8 209 aa3.61□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Lce3aQ497I5 98 aa3.61□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Krtap31-2Q8CAY5 177 aa3.61□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Sprr2eO70556 76 aa3.6□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Krtap4-9B1AQA9 244 aa3.59□□□□□ -1.83
Rfx1-201ENSMUST00000005600 Sprr2fO70557 76 aa3.59□□□□□ -1.84
Rfx1-201ENSMUST00000005600 Lce1lQ9D1G7 135 aa3.57□□□□□ -1.84
Rfx1-201ENSMUST00000005600 Krtap4-13Q9D7P3 165 aa3.49□□□□□ -1.85
Rfx1-201ENSMUST00000005600 Krtap4-16Q91W93 202 aa3.48□□□□□ -1.85
Rfx1-201ENSMUST00000005600 ObscnA2AAJ9 8891 aaKnown RBP3.48□□□□□ -1.85
Rfx1-201ENSMUST00000005600 2300003K06RikA2A4M0 262 aa3.47□□□□□ -1.85
Rfx1-201ENSMUST00000005600 Macf1Q9QXZ0 7354 aaKnown RBP3.46□□□□□ -1.86
Rfx1-201ENSMUST00000005600 Lce1bQ9D149 137 aa3.41□□□□□ -1.86
Rfx1-201ENSMUST00000005600 Krtap4-7Q9D732 168 aa3.4□□□□□ -1.87
Rfx1-201ENSMUST00000005600 Mt1P02802 61 aaKnown RBP3.27□□□□□ -1.89
Rfx1-201ENSMUST00000005600 Gm11555B1AQ89 175 aa3.27□□□□□ -1.89
Rfx1-201ENSMUST00000005600 Lce1kJ3QP15 125 aa3.23□□□□□ -1.89
Rfx1-201ENSMUST00000005600 Krtap6-3A0A087WQL6 57 aa3.21□□□□□ -1.9
Rfx1-201ENSMUST00000005600 Gm10024A0A0A0MQA4 119 aa3.18□□□□□ -1.9
Rfx1-201ENSMUST00000005600 DstQ91ZU6 7393 aaKnown RBP3.08□□□□□ -1.92
Rfx1-201ENSMUST00000005600 Gm11554B1AQB2 190 aa3.04□□□□□ -1.92
Rfx1-201ENSMUST00000005600 Krtap20-2E9Q0A8 60 aa3.02□□□□□ -1.93
Rfx1-201ENSMUST00000005600 Muc19Q6PZE0 7524 aa3.01□□□□□ -1.93
Rfx1-201ENSMUST00000005600 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Rfx1-201ENSMUST00000005600 Gm11568A2A4M2 211 aa3□□□□□ -1.93
Rfx1-201ENSMUST00000005600 Krtap9-1Q64526 186 aa3□□□□□ -1.93
Rfx1-201ENSMUST00000005600 Mt3P28184 68 aa2.92□□□□□ -1.94
Rfx1-201ENSMUST00000005600 Eppk1Q8R0W0 6548 aa2.85□□□□□ -1.95
Rfx1-201ENSMUST00000005600 A0A1Y7VJH8 109 aa2.84□□□□□ -1.95
Rfx1-201ENSMUST00000005600 Krtap5-2Q9D5Z7 189 aa2.82□□□□□ -1.96
Rfx1-201ENSMUST00000005600 Gm10153A0A1B0GRL1 320 aa2.78□□□□□ -1.97
Rfx1-201ENSMUST00000005600 A0A1Y7VLE6 161 aa2.74□□□□□ -1.97
Rfx1-201ENSMUST00000005600 Kmt2dQ6PDK2 5588 aa2.7□□□□□ -1.98
Rfx1-201ENSMUST00000005600 Gm11639A0A1D5RLM8 5808 aa2.68□□□□□ -1.98
Rfx1-201ENSMUST00000005600 Gpr98Q8VHN7 6298 aaKnown RBP2.67□□□□□ -1.98
Rfx1-201ENSMUST00000005600 Hmcn1D3YXG0 5634 aa2.65□□□□□ -1.98
Rfx1-201ENSMUST00000005600 1110025L11RikO09048 78 aa2.57□□□□□ -2
Rfx1-201ENSMUST00000005600 Krtap6-5Q925H3 78 aa2.57□□□□□ -2
Rfx1-201ENSMUST00000005600 Gm11559Q9D3H7 191 aa2.56□□□□□ -2
Rfx1-201ENSMUST00000005600 Gm45337A0A1B0GS71 263 aa2.53□□□□□ -2
Rfx1-201ENSMUST00000005600 Gm4553A0A1B0GSA9 284 aa2.53□□□□□ -2
Rfx1-201ENSMUST00000005600 Gm40460A0A1B0GR10 244 aa2.47□□□□□ -2.01
Rfx1-201ENSMUST00000005600 Gm7579A0A1B0GRJ4 243 aa2.47□□□□□ -2.01
Rfx1-201ENSMUST00000005600 Gm2431E9Q8S1 172 aa2.47□□□□□ -2.01
Rfx1-201ENSMUST00000005600 Krtap5-5Q2TA51 241 aa2.47□□□□□ -2.01
Rfx1-201ENSMUST00000005600 Krtap5-4Q62220 223 aa2.47□□□□□ -2.01
Rfx1-201ENSMUST00000005600 Sprr2bO70554 98 aa2.47□□□□□ -2.01
Rfx1-201ENSMUST00000005600 A030005L19RikA0A1Y7VIU2 113 aa2.3□□□□□ -2.04
Rfx1-201ENSMUST00000005600 Gm10229O08631 77 aa2.28□□□□□ -2.04
Rfx1-201ENSMUST00000005600 Gm39115A0A1B0GSH7 232 aa2.21□□□□□ -2.06
Rfx1-201ENSMUST00000005600 AhnakE9Q616 5656 aaKnown RBP2.17□□□□□ -2.06
Rfx1-201ENSMUST00000005600 Phgr1Q8K0G7 91 aa2.16□□□□□ -2.06
Rfx1-201ENSMUST00000005600 Krtap21-1Q925H4 128 aa2.1□□□□□ -2.07
Rfx1-201ENSMUST00000005600 A0A1Y7VJ07 166 aa2.08□□□□□ -2.08
Rfx1-201ENSMUST00000005600 Gm11567Q9D141 195 aa2.04□□□□□ -2.08
Rfx1-201ENSMUST00000005600 Gm45618A0A1B0GSA0 219 aa1.98□□□□□ -2.09
Rfx1-201ENSMUST00000005600 A0A286YCP9 139 aa1.97□□□□□ -2.09
Rfx1-201ENSMUST00000005600 Gm29735A0A1B0GT06 219 aa1.88□□□□□ -2.11
Rfx1-201ENSMUST00000005600 Krtap6-2O08884 159 aa1.88□□□□□ -2.11
Rfx1-201ENSMUST00000005600 Krtap28-10A0A1Y7VP58 119 aa1.63□□□□□ -2.15
Rfx1-201ENSMUST00000005600 Krtap28-13A0A087WQP5 138 aa1.55□□□□□ -2.16
Rfx1-201ENSMUST00000005600 A030005K14RikA0A1Y7VNY1 122 aa1.53□□□□□ -2.16
Rfx1-201ENSMUST00000005600 Gm7544A0A1Y7VJ58 118 aa1.51□□□□□ -2.17
Rfx1-201ENSMUST00000005600 A030003K21RikA0A1Y7VIM3 128 aa1.31□□□□□ -2.2
Rfx1-201ENSMUST00000005600 Gm6217A0A1Y7VJK9 128 aa1.25□□□□□ -2.21
Rfx1-201ENSMUST00000005600 A030014E15RikA0A1Y7VJV2 120 aa1.25□□□□□ -2.21
Rfx1-201ENSMUST00000005600 Krtap5-1Q64507 230 aa1.24□□□□□ -2.21
Rfx1-201ENSMUST00000005600 Gm4559A4IF42 199 aa1.07□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 72.6 ms