RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Lce1lQ9D1G7 135 aa3.89□□□□□ -1.79
Msh6-201ENSMUST00000005503 Krtap4-6Q3V4B7 195 aa3.85□□□□□ -1.79
Msh6-201ENSMUST00000005503 Mt4P47945 62 aa3.82□□□□□ -1.8
Msh6-201ENSMUST00000005503 Gm11562A0PK51 136 aa3.81□□□□□ -1.8
Msh6-201ENSMUST00000005503 Krtap31-1Q9D644 177 aa3.8□□□□□ -1.8
Msh6-201ENSMUST00000005503 Sprr2iO70560 76 aa3.79□□□□□ -1.8
Msh6-201ENSMUST00000005503 Lce1a1Q9CQH5 143 aa3.78□□□□□ -1.8
Msh6-201ENSMUST00000005503 Syne2Q6ZWQ0 6874 aaKnown RBP3.76□□□□□ -1.81
Msh6-201ENSMUST00000005503 Gm10024A0A0A0MQA4 119 aa3.75□□□□□ -1.81
Msh6-201ENSMUST00000005503 ObscnA2AAJ9 8891 aaKnown RBP3.72□□□□□ -1.81
Msh6-201ENSMUST00000005503 Sprr2fO70557 76 aa3.71□□□□□ -1.82
Msh6-201ENSMUST00000005503 Krtap4-16Q91W93 202 aa3.7□□□□□ -1.82
Msh6-201ENSMUST00000005503 Krtap4-2B1AQ85 167 aa3.7□□□□□ -1.82
Msh6-201ENSMUST00000005503 Krtap4-1Q3UUY3 169 aa3.69□□□□□ -1.82
Msh6-201ENSMUST00000005503 Sprr2hO70559 108 aa3.68□□□□□ -1.82
Msh6-201ENSMUST00000005503 Macf1Q9QXZ0 7354 aaKnown RBP3.59□□□□□ -1.83
Msh6-201ENSMUST00000005503 Krtap4-9B1AQA9 244 aa3.58□□□□□ -1.84
Msh6-201ENSMUST00000005503 Gm11564A2A4L9 201 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 Gm11563B1AQ90 168 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 Gm11595B1AQA7 289 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 Krtap4-8B1AQA8 209 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 2300003K06RikA2A4M0 262 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 Sprr2eO70556 76 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 Lce1kJ3QP15 125 aa3.55□□□□□ -1.84
Msh6-201ENSMUST00000005503 Gm11596B1AQB0 205 aa3.53□□□□□ -1.84
Msh6-201ENSMUST00000005503 Krtap4-13Q9D7P3 165 aa3.5□□□□□ -1.85
Msh6-201ENSMUST00000005503 Krtap4-7Q9D732 168 aa3.44□□□□□ -1.86
Msh6-201ENSMUST00000005503 Muc19Q6PZE0 7524 aa3.35□□□□□ -1.87
Msh6-201ENSMUST00000005503 Gm11555B1AQ89 175 aa3.27□□□□□ -1.89
Msh6-201ENSMUST00000005503 Mt1P02802 61 aaKnown RBP3.27□□□□□ -1.89
Msh6-201ENSMUST00000005503 Mt3P28184 68 aa3.18□□□□□ -1.9
Msh6-201ENSMUST00000005503 Krtap20-2E9Q0A8 60 aa3.16□□□□□ -1.9
Msh6-201ENSMUST00000005503 DstQ91ZU6 7393 aaKnown RBP3.07□□□□□ -1.92
Msh6-201ENSMUST00000005503 Krtap31-2Q8CAY5 177 aa3.05□□□□□ -1.92
Msh6-201ENSMUST00000005503 Krtap6-3A0A087WQL6 57 aa3.04□□□□□ -1.92
Msh6-201ENSMUST00000005503 Gm11554B1AQB2 190 aa3.04□□□□□ -1.92
Msh6-201ENSMUST00000005503 NebE9Q1W3 7152 aa2.98□□□□□ -1.93
Msh6-201ENSMUST00000005503 Kmt2dQ6PDK2 5588 aa2.87□□□□□ -1.95
Msh6-201ENSMUST00000005503 Gm11568A2A4M2 211 aa2.82□□□□□ -1.96
Msh6-201ENSMUST00000005503 Krtap9-1Q64526 186 aa2.82□□□□□ -1.96
Msh6-201ENSMUST00000005503 Krtap5-2Q9D5Z7 189 aa2.71□□□□□ -1.98
Msh6-201ENSMUST00000005503 Hmcn1D3YXG0 5634 aa2.68□□□□□ -1.98
Msh6-201ENSMUST00000005503 1110025L11RikO09048 78 aa2.65□□□□□ -1.99
Msh6-201ENSMUST00000005503 Krtap6-5Q925H3 78 aa2.65□□□□□ -1.99
Msh6-201ENSMUST00000005503 Sprr2bO70554 98 aa2.63□□□□□ -1.99
Msh6-201ENSMUST00000005503 A0A1Y7VJH8 109 aa2.57□□□□□ -2
Msh6-201ENSMUST00000005503 Gm11559Q9D3H7 191 aa2.56□□□□□ -2
Msh6-201ENSMUST00000005503 Gm10153A0A1B0GRL1 320 aa2.53□□□□□ -2.01
Msh6-201ENSMUST00000005503 Gm4553A0A1B0GSA9 284 aa2.51□□□□□ -2.01
Msh6-201ENSMUST00000005503 Eppk1Q8R0W0 6548 aa2.48□□□□□ -2.01
Msh6-201ENSMUST00000005503 Gm45337A0A1B0GS71 263 aa2.43□□□□□ -2.02
Msh6-201ENSMUST00000005503 Gm10229O08631 77 aa2.42□□□□□ -2.02
Msh6-201ENSMUST00000005503 Gm40460A0A1B0GR10 244 aa2.39□□□□□ -2.03
Msh6-201ENSMUST00000005503 Gm7579A0A1B0GRJ4 243 aa2.39□□□□□ -2.03
Msh6-201ENSMUST00000005503 Krtap5-5Q2TA51 241 aa2.39□□□□□ -2.03
Msh6-201ENSMUST00000005503 Krtap5-4Q62220 223 aa2.39□□□□□ -2.03
Msh6-201ENSMUST00000005503 Gm11639A0A1D5RLM8 5808 aa2.38□□□□□ -2.03
Msh6-201ENSMUST00000005503 Phgr1Q8K0G7 91 aa2.38□□□□□ -2.03
Msh6-201ENSMUST00000005503 Gm2431E9Q8S1 172 aa2.36□□□□□ -2.03
Msh6-201ENSMUST00000005503 Gpr98Q8VHN7 6298 aaKnown RBP2.33□□□□□ -2.04
Msh6-201ENSMUST00000005503 A0A1Y7VLE6 161 aa2.26□□□□□ -2.05
Msh6-201ENSMUST00000005503 A030005L19RikA0A1Y7VIU2 113 aa2.24□□□□□ -2.05
Msh6-201ENSMUST00000005503 Gm39115A0A1B0GSH7 232 aa2.18□□□□□ -2.06
Msh6-201ENSMUST00000005503 AhnakE9Q616 5656 aaKnown RBP2.18□□□□□ -2.06
Msh6-201ENSMUST00000005503 Krtap28-10A0A1Y7VP58 119 aa2.13□□□□□ -2.07
Msh6-201ENSMUST00000005503 Krtap21-1Q925H4 128 aa2.03□□□□□ -2.09
Msh6-201ENSMUST00000005503 Krtap28-13A0A087WQP5 138 aa2.01□□□□□ -2.09
Msh6-201ENSMUST00000005503 Krtap6-2O08884 159 aa1.99□□□□□ -2.09
Msh6-201ENSMUST00000005503 Gm7544A0A1Y7VJ58 118 aa1.96□□□□□ -2.1
Msh6-201ENSMUST00000005503 A030005K14RikA0A1Y7VNY1 122 aa1.95□□□□□ -2.1
Msh6-201ENSMUST00000005503 Gm11567Q9D141 195 aa1.9□□□□□ -2.11
Msh6-201ENSMUST00000005503 Gm45618A0A1B0GSA0 219 aa1.88□□□□□ -2.11
Msh6-201ENSMUST00000005503 Gm29735A0A1B0GT06 219 aa1.82□□□□□ -2.12
Msh6-201ENSMUST00000005503 A0A1Y7VJ07 166 aa1.73□□□□□ -2.13
Msh6-201ENSMUST00000005503 A030003K21RikA0A1Y7VIM3 128 aa1.72□□□□□ -2.13
Msh6-201ENSMUST00000005503 A0A286YCP9 139 aa1.7□□□□□ -2.14
Msh6-201ENSMUST00000005503 Gm6217A0A1Y7VJK9 128 aa1.66□□□□□ -2.14
Msh6-201ENSMUST00000005503 A030014E15RikA0A1Y7VJV2 120 aa1.62□□□□□ -2.15
Msh6-201ENSMUST00000005503 Krtap5-1Q64507 230 aa1.18□□□□□ -2.22
Msh6-201ENSMUST00000005503 Gm4559A4IF42 199 aa1□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 83.2 ms