RNA–Protein interactions for RNA: ENSMUST00000002198.3

Sf3a1-201, Transcript of Splicing factor 3A subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3a1, Length 4,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1-201ENSMUST00000002198 Lce1bQ9D149 137 aa4.56□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Mdn1A2ANY6 5589 aaKnown RBP4.55□□□□□ -1.68
Sf3a1-201ENSMUST00000002198 Gm11562A0PK51 136 aa4.51□□□□□ -1.69
Sf3a1-201ENSMUST00000002198 Gm11938Q9D3H4 131 aa4.51□□□□□ -1.69
Sf3a1-201ENSMUST00000002198 Gm11564A2A4L9 201 aa4.49□□□□□ -1.69
Sf3a1-201ENSMUST00000002198 Gm11563B1AQ90 168 aa4.49□□□□□ -1.69
Sf3a1-201ENSMUST00000002198 Gm11595B1AQA7 289 aa4.49□□□□□ -1.69
Sf3a1-201ENSMUST00000002198 Krtap4-8B1AQA8 209 aa4.49□□□□□ -1.69
Sf3a1-201ENSMUST00000002198 Lce1eQ9D139 143 aa4.45□□□□□ -1.7
Sf3a1-201ENSMUST00000002198 Krtap4-9B1AQA9 244 aa4.4□□□□□ -1.71
Sf3a1-201ENSMUST00000002198 2300003K06RikA2A4M0 262 aa4.32□□□□□ -1.72
Sf3a1-201ENSMUST00000002198 Krtap4-7Q9D732 168 aa4.26□□□□□ -1.73
Sf3a1-201ENSMUST00000002198 Gm10024A0A0A0MQA4 119 aa4.24□□□□□ -1.73
Sf3a1-201ENSMUST00000002198 Syne2Q6ZWQ0 6874 aaKnown RBP4.24□□□□□ -1.73
Sf3a1-201ENSMUST00000002198 Krtap4-13Q9D7P3 165 aa4.22□□□□□ -1.73
Sf3a1-201ENSMUST00000002198 Sprr2hO70559 108 aa4.19□□□□□ -1.74
Sf3a1-201ENSMUST00000002198 Krtap6-3A0A087WQL6 57 aa4.17□□□□□ -1.74
Sf3a1-201ENSMUST00000002198 Gm11555B1AQ89 175 aa4.17□□□□□ -1.74
Sf3a1-201ENSMUST00000002198 Lce1kJ3QP15 125 aa4.15□□□□□ -1.74
Sf3a1-201ENSMUST00000002198 Sprr2eO70556 76 aa4.15□□□□□ -1.75
Sf3a1-201ENSMUST00000002198 Sprr2fO70557 76 aa4.08□□□□□ -1.76
Sf3a1-201ENSMUST00000002198 Mt3P28184 68 aa4.04□□□□□ -1.76
Sf3a1-201ENSMUST00000002198 Mt1P02802 61 aaKnown RBP3.97□□□□□ -1.77
Sf3a1-201ENSMUST00000002198 Fsip2A2ARZ3 6995 aa3.92□□□□□ -1.78
Sf3a1-201ENSMUST00000002198 Krtap31-1Q9D644 177 aa3.89□□□□□ -1.79
Sf3a1-201ENSMUST00000002198 Lce1a1Q9CQH5 143 aa3.88□□□□□ -1.79
Sf3a1-201ENSMUST00000002198 Krtap20-2E9Q0A8 60 aa3.81□□□□□ -1.8
Sf3a1-201ENSMUST00000002198 Syne1Q6ZWR6 8799 aa3.68□□□□□ -1.82
Sf3a1-201ENSMUST00000002198 Gm11554B1AQB2 190 aa3.59□□□□□ -1.83
Sf3a1-201ENSMUST00000002198 ObscnA2AAJ9 8891 aaKnown RBP3.58□□□□□ -1.84
Sf3a1-201ENSMUST00000002198 Eppk1Q8R0W0 6548 aa3.53□□□□□ -1.84
Sf3a1-201ENSMUST00000002198 Gm11568A2A4M2 211 aa3.43□□□□□ -1.86
Sf3a1-201ENSMUST00000002198 Krtap9-1Q64526 186 aa3.43□□□□□ -1.86
Sf3a1-201ENSMUST00000002198 Sprr2bO70554 98 aa3.41□□□□□ -1.86
Sf3a1-201ENSMUST00000002198 Krtap5-2Q9D5Z7 189 aa3.4□□□□□ -1.86
Sf3a1-201ENSMUST00000002198 Krtap4-16Q91W93 202 aa3.4□□□□□ -1.87
Sf3a1-201ENSMUST00000002198 Gm11559Q9D3H7 191 aa3.39□□□□□ -1.87
Sf3a1-201ENSMUST00000002198 Gm4553A0A1B0GSA9 284 aa3.19□□□□□ -1.9
Sf3a1-201ENSMUST00000002198 1110025L11RikO09048 78 aa3.19□□□□□ -1.9
Sf3a1-201ENSMUST00000002198 Krtap6-5Q925H3 78 aa3.19□□□□□ -1.9
Sf3a1-201ENSMUST00000002198 Kmt2dQ6PDK2 5588 aa3.17□□□□□ -1.9
Sf3a1-201ENSMUST00000002198 Macf1Q9QXZ0 7354 aaKnown RBP3.11□□□□□ -1.91
Sf3a1-201ENSMUST00000002198 DstQ91ZU6 7393 aaKnown RBP3.1□□□□□ -1.91
Sf3a1-201ENSMUST00000002198 Gm10153A0A1B0GRL1 320 aa3.03□□□□□ -1.92
Sf3a1-201ENSMUST00000002198 Gm45337A0A1B0GS71 263 aa2.99□□□□□ -1.93
Sf3a1-201ENSMUST00000002198 A030005L19RikA0A1Y7VIU2 113 aa2.97□□□□□ -1.93
Sf3a1-201ENSMUST00000002198 A0A1Y7VJH8 109 aa2.97□□□□□ -1.93
Sf3a1-201ENSMUST00000002198 Gm40460A0A1B0GR10 244 aa2.96□□□□□ -1.94
Sf3a1-201ENSMUST00000002198 Gm7579A0A1B0GRJ4 243 aa2.96□□□□□ -1.94
Sf3a1-201ENSMUST00000002198 Krtap5-5Q2TA51 241 aa2.96□□□□□ -1.94
Sf3a1-201ENSMUST00000002198 Krtap5-4Q62220 223 aa2.96□□□□□ -1.94
Sf3a1-201ENSMUST00000002198 Gm2431E9Q8S1 172 aa2.96□□□□□ -1.94
Sf3a1-201ENSMUST00000002198 Gm10229O08631 77 aa2.93□□□□□ -1.94
Sf3a1-201ENSMUST00000002198 Muc16A0A140LJ72 8478 aa2.89□□□□□ -1.95
Sf3a1-201ENSMUST00000002198 Gm11639A0A1D5RLM8 5808 aa2.85□□□□□ -1.95
Sf3a1-201ENSMUST00000002198 Hmcn1D3YXG0 5634 aa2.79□□□□□ -1.96
Sf3a1-201ENSMUST00000002198 NebE9Q1W3 7152 aa2.75□□□□□ -1.97
Sf3a1-201ENSMUST00000002198 Gm39115A0A1B0GSH7 232 aa2.75□□□□□ -1.97
Sf3a1-201ENSMUST00000002198 Gpr98Q8VHN7 6298 aaKnown RBP2.74□□□□□ -1.97
Sf3a1-201ENSMUST00000002198 Krtap31-2Q8CAY5 177 aa2.69□□□□□ -1.98
Sf3a1-201ENSMUST00000002198 AhnakE9Q616 5656 aaKnown RBP2.64□□□□□ -1.99
Sf3a1-201ENSMUST00000002198 Muc19Q6PZE0 7524 aa2.52□□□□□ -2.01
Sf3a1-201ENSMUST00000002198 Phgr1Q8K0G7 91 aa2.46□□□□□ -2.02
Sf3a1-201ENSMUST00000002198 A0A1Y7VLE6 161 aa2.45□□□□□ -2.02
Sf3a1-201ENSMUST00000002198 Gm45618A0A1B0GSA0 219 aa2.42□□□□□ -2.02
Sf3a1-201ENSMUST00000002198 Krtap6-2O08884 159 aa2.41□□□□□ -2.02
Sf3a1-201ENSMUST00000002198 Krtap21-1Q925H4 128 aa2.41□□□□□ -2.02
Sf3a1-201ENSMUST00000002198 A030003K21RikA0A1Y7VIM3 128 aa2.35□□□□□ -2.03
Sf3a1-201ENSMUST00000002198 Gm29735A0A1B0GT06 219 aa2.25□□□□□ -2.05
Sf3a1-201ENSMUST00000002198 Gm11567Q9D141 195 aa2.19□□□□□ -2.06
Sf3a1-201ENSMUST00000002198 Gm6217A0A1Y7VJK9 128 aa2.18□□□□□ -2.06
Sf3a1-201ENSMUST00000002198 A0A1Y7VJ07 166 aa1.91□□□□□ -2.1
Sf3a1-201ENSMUST00000002198 Krtap28-10A0A1Y7VP58 119 aa1.84□□□□□ -2.11
Sf3a1-201ENSMUST00000002198 A030005K14RikA0A1Y7VNY1 122 aa1.78□□□□□ -2.13
Sf3a1-201ENSMUST00000002198 Krtap28-13A0A087WQP5 138 aa1.69□□□□□ -2.14
Sf3a1-201ENSMUST00000002198 Gm7544A0A1Y7VJ58 118 aa1.67□□□□□ -2.14
Sf3a1-201ENSMUST00000002198 A030014E15RikA0A1Y7VJV2 120 aa1.65□□□□□ -2.15
Sf3a1-201ENSMUST00000002198 A0A286YCP9 139 aa1.5□□□□□ -2.17
Sf3a1-201ENSMUST00000002198 Krtap5-1Q64507 230 aa1.48□□□□□ -2.17
Sf3a1-201ENSMUST00000002198 Gm4559A4IF42 199 aa1.18□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 67.8 ms