RNA–Protein interactions for RNA: ENSMUST00000001536.8

Nkx2-1-201, Transcript of Homeobox protein Nkx-2.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx2-1, Length 2,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1-201ENSMUST00000001536 Lce1gQ9D195 139 aa5.24□□□□□ -1.57
Nkx2-1-201ENSMUST00000001536 Krtap28-13A0A087WQP5 138 aa5.22□□□□□ -1.57
Nkx2-1-201ENSMUST00000001536 Mt4P47945 62 aa5.16□□□□□ -1.58
Nkx2-1-201ENSMUST00000001536 Lce1fB9EJP6 147 aa5.15□□□□□ -1.58
Nkx2-1-201ENSMUST00000001536 Lce1a1Q9CQH5 143 aa5.15□□□□□ -1.58
Nkx2-1-201ENSMUST00000001536 Syne2Q6ZWQ0 6874 aaKnown RBP5.15□□□□□ -1.58
Nkx2-1-201ENSMUST00000001536 Gm11596B1AQB0 205 aa5.15□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Lce3bQ9CQM7 98 aa5.15□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Gm38119A0A0A6YX29 146 aa5.14□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Gm11564A2A4L9 201 aa5.12□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Gm11595B1AQA7 289 aa5.12□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Krtap4-8B1AQA8 209 aa5.12□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Gm10100J3QK64 120 aa5.11□□□□□ -1.59
Nkx2-1-201ENSMUST00000001536 Krtap19-4Q925H7 84 aa5.08□□□□□ -1.6
Nkx2-1-201ENSMUST00000001536 Krtap4-9B1AQA9 244 aa5.05□□□□□ -1.6
Nkx2-1-201ENSMUST00000001536 Gm10142J3KMP7 120 aa4.97□□□□□ -1.61
Nkx2-1-201ENSMUST00000001536 Sprr2iO70560 76 aa4.95□□□□□ -1.62
Nkx2-1-201ENSMUST00000001536 Lce1bQ9D149 137 aa4.94□□□□□ -1.62
Nkx2-1-201ENSMUST00000001536 Lce3cQ91V05 98 aa4.93□□□□□ -1.62
Nkx2-1-201ENSMUST00000001536 Lce3eF8VQJ0 98 aa4.9□□□□□ -1.63
Nkx2-1-201ENSMUST00000001536 Lce3fQ6PAI4 98 aa4.9□□□□□ -1.63
Nkx2-1-201ENSMUST00000001536 Krtap4-13Q9D7P3 165 aa4.9□□□□□ -1.63
Nkx2-1-201ENSMUST00000001536 2300003K06RikA2A4M0 262 aa4.88□□□□□ -1.63
Nkx2-1-201ENSMUST00000001536 ObscnA2AAJ9 8891 aaKnown RBP4.86□□□□□ -1.63
Nkx2-1-201ENSMUST00000001536 Lce3dE9Q8V1 98 aa4.84□□□□□ -1.63
Nkx2-1-201ENSMUST00000001536 Sprr2kO70562 68 aa4.81□□□□□ -1.64
Nkx2-1-201ENSMUST00000001536 Sprr2hO70559 108 aa4.76□□□□□ -1.65
Nkx2-1-201ENSMUST00000001536 Lce1kJ3QP15 125 aa4.75□□□□□ -1.65
Nkx2-1-201ENSMUST00000001536 A030003K21RikA0A1Y7VIM3 128 aa4.73□□□□□ -1.65
Nkx2-1-201ENSMUST00000001536 Gm6217A0A1Y7VJK9 128 aa4.73□□□□□ -1.65
Nkx2-1-201ENSMUST00000001536 A0A286YCP9 139 aa4.73□□□□□ -1.65
Nkx2-1-201ENSMUST00000001536 Sprr2fO70557 76 aa4.7□□□□□ -1.66
Nkx2-1-201ENSMUST00000001536 Lce1lQ9D1G7 135 aa4.69□□□□□ -1.66
Nkx2-1-201ENSMUST00000001536 Lce3aQ497I5 98 aa4.67□□□□□ -1.66
Nkx2-1-201ENSMUST00000001536 Mt1P02802 61 aaKnown RBP4.64□□□□□ -1.67
Nkx2-1-201ENSMUST00000001536 Sprr2eO70556 76 aa4.63□□□□□ -1.67
Nkx2-1-201ENSMUST00000001536 Krtap4-16Q91W93 202 aa4.53□□□□□ -1.68
Nkx2-1-201ENSMUST00000001536 Gm11568A2A4M2 211 aa4.51□□□□□ -1.69
Nkx2-1-201ENSMUST00000001536 Krtap9-1Q64526 186 aa4.51□□□□□ -1.69
Nkx2-1-201ENSMUST00000001536 Krtap20-2E9Q0A8 60 aa4.5□□□□□ -1.69
Nkx2-1-201ENSMUST00000001536 Macf1Q9QXZ0 7354 aaKnown RBP4.42□□□□□ -1.7
Nkx2-1-201ENSMUST00000001536 A0A1Y7VJ07 166 aa4.39□□□□□ -1.71
Nkx2-1-201ENSMUST00000001536 A030014E15RikA0A1Y7VJV2 120 aa4.36□□□□□ -1.71
Nkx2-1-201ENSMUST00000001536 Krtap5-2Q9D5Z7 189 aa4.32□□□□□ -1.72
Nkx2-1-201ENSMUST00000001536 Krtap6-3A0A087WQL6 57 aa4.28□□□□□ -1.72
Nkx2-1-201ENSMUST00000001536 Muc16A0A140LJ72 8478 aa4.24□□□□□ -1.73
Nkx2-1-201ENSMUST00000001536 Gm10153A0A1B0GRL1 320 aa4.18□□□□□ -1.74
Nkx2-1-201ENSMUST00000001536 Kmt2dQ6PDK2 5588 aa4.11□□□□□ -1.75
Nkx2-1-201ENSMUST00000001536 Hmcn1D3YXG0 5634 aa4.09□□□□□ -1.75
Nkx2-1-201ENSMUST00000001536 Gm10024A0A0A0MQA4 119 aa4.08□□□□□ -1.76
Nkx2-1-201ENSMUST00000001536 Mt3P28184 68 aa4.08□□□□□ -1.76
Nkx2-1-201ENSMUST00000001536 Gm11554B1AQB2 190 aa3.99□□□□□ -1.77
Nkx2-1-201ENSMUST00000001536 Gm11559Q9D3H7 191 aa3.96□□□□□ -1.78
Nkx2-1-201ENSMUST00000001536 Gm4553A0A1B0GSA9 284 aa3.94□□□□□ -1.78
Nkx2-1-201ENSMUST00000001536 Gm45337A0A1B0GS71 263 aa3.9□□□□□ -1.78
Nkx2-1-201ENSMUST00000001536 Gm2431E9Q8S1 172 aa3.88□□□□□ -1.79
Nkx2-1-201ENSMUST00000001536 Muc19Q6PZE0 7524 aa3.81□□□□□ -1.8
Nkx2-1-201ENSMUST00000001536 Gm40460A0A1B0GR10 244 aa3.77□□□□□ -1.81
Nkx2-1-201ENSMUST00000001536 Gm7579A0A1B0GRJ4 243 aa3.77□□□□□ -1.81
Nkx2-1-201ENSMUST00000001536 Krtap5-5Q2TA51 241 aa3.77□□□□□ -1.81
Nkx2-1-201ENSMUST00000001536 Krtap5-4Q62220 223 aa3.77□□□□□ -1.81
Nkx2-1-201ENSMUST00000001536 DstQ91ZU6 7393 aaKnown RBP3.63□□□□□ -1.83
Nkx2-1-201ENSMUST00000001536 1110025L11RikO09048 78 aa3.53□□□□□ -1.84
Nkx2-1-201ENSMUST00000001536 Krtap6-5Q925H3 78 aa3.53□□□□□ -1.84
Nkx2-1-201ENSMUST00000001536 Gm11639A0A1D5RLM8 5808 aa3.47□□□□□ -1.85
Nkx2-1-201ENSMUST00000001536 Gm39115A0A1B0GSH7 232 aa3.46□□□□□ -1.86
Nkx2-1-201ENSMUST00000001536 Eppk1Q8R0W0 6548 aa3.31□□□□□ -1.88
Nkx2-1-201ENSMUST00000001536 NebE9Q1W3 7152 aa3.3□□□□□ -1.88
Nkx2-1-201ENSMUST00000001536 AhnakE9Q616 5656 aaKnown RBP3.28□□□□□ -1.88
Nkx2-1-201ENSMUST00000001536 Gm10229O08631 77 aa3.13□□□□□ -1.91
Nkx2-1-201ENSMUST00000001536 Gm45618A0A1B0GSA0 219 aa3.1□□□□□ -1.91
Nkx2-1-201ENSMUST00000001536 Sprr2bO70554 98 aa3.08□□□□□ -1.92
Nkx2-1-201ENSMUST00000001536 Gm11567Q9D141 195 aa3.03□□□□□ -1.92
Nkx2-1-201ENSMUST00000001536 Krtap21-1Q925H4 128 aa2.9□□□□□ -1.94
Nkx2-1-201ENSMUST00000001536 Gpr98Q8VHN7 6298 aaKnown RBP2.87□□□□□ -1.95
Nkx2-1-201ENSMUST00000001536 Gm29735A0A1B0GT06 219 aa2.84□□□□□ -1.95
Nkx2-1-201ENSMUST00000001536 Phgr1Q8K0G7 91 aa2.82□□□□□ -1.96
Nkx2-1-201ENSMUST00000001536 Krtap6-2O08884 159 aa2.64□□□□□ -1.99
Nkx2-1-201ENSMUST00000001536 Krtap5-1Q64507 230 aa2.27□□□□□ -2.05
Nkx2-1-201ENSMUST00000001536 Gm4559A4IF42 199 aa2.15□□□□□ -2.07
Retrieved 80 of 22,080 RNA–protein pairs in 125.5 ms