RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Lce3dE9Q8V1 98 aa2.02□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Fsip2A2ARZ3 6995 aa2.01□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Lce1gQ9D195 139 aa2.01□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Lce1iQ9D6P5 149 aa2.01□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Lce1hQ9D6R3 140 aa2.01□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Krtap9-3Q3V2C1 136 aa2□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Gm10061D3Z714 54 aa1.99□□□□□ -2.09
Cntn1-201ENSMUST00000000109 SspoQ8CG65 4998 aa1.98□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Gm10024A0A0A0MQA4 119 aa1.98□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Krtap19-2Q925I0 141 aa1.97□□□□□ -2.09
Cntn1-201ENSMUST00000000109 Gm38119A0A0A6YX29 146 aa1.96□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Mt2P02798 61 aa1.96□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Gm11569B1AQB1 180 aa1.95□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Krtap4-8B1AQA8 209 aa1.94□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Lce1a2Q9D1K4 149 aa1.94□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Krtap22-2J3QNX6 67 aa1.93□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Sprr2hO70559 108 aa1.93□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Gm11938Q9D3H4 131 aa1.92□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Lce1dQ9D731 133 aa1.92□□□□□ -2.1
Cntn1-201ENSMUST00000000109 2300003K06RikA2A4M0 262 aa1.9□□□□□ -2.1
Cntn1-201ENSMUST00000000109 Lce1bQ9D149 137 aa1.9□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Syne2Q6ZWQ0 6874 aaKnown RBP1.89□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Mt3P28184 68 aa1.89□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Krtap4-6Q3V4B7 195 aa1.88□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Krtap19-4Q925H7 84 aa1.87□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Sprr2bO70554 98 aa1.86□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Eppk1Q8R0W0 6548 aa1.84□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Lce1kJ3QP15 125 aa1.84□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Gm39115A0A1B0GSH7 232 aa1.84□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Lce1fB9EJP6 147 aa1.84□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Lce1cQ9D1C5 147 aa1.84□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Lce1lQ9D1G7 135 aa1.84□□□□□ -2.11
Cntn1-201ENSMUST00000000109 Lce1a1Q9CQH5 143 aa1.84□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Lce1eQ9D139 143 aa1.82□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Gm45618A0A1B0GSA0 219 aa1.82□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Muc5bE9Q5I3 4800 aa1.8□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Mt4P47945 62 aa1.8□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Muc16A0A140LJ72 8478 aa1.79□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Gm11596B1AQB0 205 aa1.78□□□□□ -2.12
Cntn1-201ENSMUST00000000109 Krtap4-16Q91W93 202 aa1.75□□□□□ -2.13
Cntn1-201ENSMUST00000000109 Gm11564A2A4L9 201 aa1.73□□□□□ -2.13
Cntn1-201ENSMUST00000000109 Gm11595B1AQA7 289 aa1.73□□□□□ -2.13
Cntn1-201ENSMUST00000000109 Krtap4-9B1AQA9 244 aa1.73□□□□□ -2.13
Cntn1-201ENSMUST00000000109 Macf1Q9QXZ0 7354 aaKnown RBP1.73□□□□□ -2.13
Cntn1-201ENSMUST00000000109 Gm11568A2A4M2 211 aa1.72□□□□□ -2.13
Cntn1-201ENSMUST00000000109 Krtap4-13Q9D7P3 165 aa1.7□□□□□ -2.14
Cntn1-201ENSMUST00000000109 Gm45337A0A1B0GS71 263 aa1.7□□□□□ -2.14
Cntn1-201ENSMUST00000000109 ObscnA2AAJ9 8891 aaKnown RBP1.66□□□□□ -2.14
Cntn1-201ENSMUST00000000109 Krtap9-1Q64526 186 aa1.65□□□□□ -2.14
Cntn1-201ENSMUST00000000109 Gm11559Q9D3H7 191 aa1.64□□□□□ -2.15
Cntn1-201ENSMUST00000000109 DstQ91ZU6 7393 aaKnown RBP1.62□□□□□ -2.15
Cntn1-201ENSMUST00000000109 Krtap6-3A0A087WQL6 57 aa1.61□□□□□ -2.15
Cntn1-201ENSMUST00000000109 Gm2431E9Q8S1 172 aa1.59□□□□□ -2.15
Cntn1-201ENSMUST00000000109 Krtap5-2Q9D5Z7 189 aa1.58□□□□□ -2.16
Cntn1-201ENSMUST00000000109 Muc19Q6PZE0 7524 aa1.57□□□□□ -2.16
Cntn1-201ENSMUST00000000109 Gpr98Q8VHN7 6298 aaKnown RBP1.56□□□□□ -2.16
Cntn1-201ENSMUST00000000109 NebE9Q1W3 7152 aa1.52□□□□□ -2.17
Cntn1-201ENSMUST00000000109 Gm10153A0A1B0GRL1 320 aa1.5□□□□□ -2.17
Cntn1-201ENSMUST00000000109 Krtap20-2E9Q0A8 60 aa1.48□□□□□ -2.17
Cntn1-201ENSMUST00000000109 Gm11554B1AQB2 190 aa1.46□□□□□ -2.18
Cntn1-201ENSMUST00000000109 Mt1P02802 61 aaKnown RBP1.43□□□□□ -2.18
Cntn1-201ENSMUST00000000109 Kmt2dQ6PDK2 5588 aa1.42□□□□□ -2.18
Cntn1-201ENSMUST00000000109 Gm29735A0A1B0GT06 219 aa1.41□□□□□ -2.18
Cntn1-201ENSMUST00000000109 Krtap5-1Q64507 230 aa1.4□□□□□ -2.19
Cntn1-201ENSMUST00000000109 Gm11639A0A1D5RLM8 5808 aa1.38□□□□□ -2.19
Cntn1-201ENSMUST00000000109 Hmcn1D3YXG0 5634 aa1.33□□□□□ -2.2
Cntn1-201ENSMUST00000000109 Gm11567Q9D141 195 aa1.28□□□□□ -2.2
Cntn1-201ENSMUST00000000109 Gm4553A0A1B0GSA9 284 aa1.26□□□□□ -2.21
Cntn1-201ENSMUST00000000109 Krtap5-4Q62220 223 aa1.23□□□□□ -2.21
Cntn1-201ENSMUST00000000109 1110025L11RikO09048 78 aa1.17□□□□□ -2.22
Cntn1-201ENSMUST00000000109 Krtap6-5Q925H3 78 aa1.17□□□□□ -2.22
Cntn1-201ENSMUST00000000109 Krtap5-5Q2TA51 241 aa1.14□□□□□ -2.23
Cntn1-201ENSMUST00000000109 Phgr1Q8K0G7 91 aa1.12□□□□□ -2.23
Cntn1-201ENSMUST00000000109 Gm40460A0A1B0GR10 244 aa1.11□□□□□ -2.23
Cntn1-201ENSMUST00000000109 Gm7579A0A1B0GRJ4 243 aa1.11□□□□□ -2.23
Cntn1-201ENSMUST00000000109 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Cntn1-201ENSMUST00000000109 Gm10229O08631 77 aa1.07□□□□□ -2.24
Cntn1-201ENSMUST00000000109 AhnakE9Q616 5656 aaKnown RBP1.03□□□□□ -2.24
Cntn1-201ENSMUST00000000109 Krtap21-1Q925H4 128 aa0.89□□□□□ -2.27
Cntn1-201ENSMUST00000000109 Krtap6-2O08884 159 aa0.85□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 127.9 ms