RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CENPFP49454 3210 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 IPO8O15397 1037 aaKnown RBP8.27□□□□□ -1.09
TMEM116-208ENST00000549537 GNAI3P08754 354 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 IFIT1P09914 478 aaKnown RBP8.27□□□□□ -1.09
TMEM116-208ENST00000549537 MS4A1P11836 297 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 SLC5A1P13866 664 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 WNT7BP56706 349 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 USP46P62068 366 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 CHAF1AQ13111 956 aaPredicted RBP8.27□□□□□ -1.09
TMEM116-208ENST00000549537 MAP3K11Q16584 847 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 CCDC82Q8N4S0 544 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 SIL1Q9H173 461 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 SAGE1Q9NXZ1 904 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 HDAC5Q9UQL6 1122 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 PPP2R3BQ9Y5P8 575 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.27□□□□□ -1.09
TMEM116-208ENST00000549537 BRCA2P51587 3418 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
TMEM116-208ENST00000549537 OTOFQ9HC10 1997 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 J3QL48 77 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 MYO1BO43795 1136 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 SNRPBP14678 240 aaKnown RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 IL15P40933 162 aaPredicted RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 CRKP46108 304 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 HDLBPQ00341 1268 aaKnown RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 ATP2B3Q16720 1220 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 VPS37DQ86XT2 251 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 TMEM57Q8N5G2 664 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 TBC1D22AQ8WUA7 517 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 FRAT1Q92837 279 aaPredicted RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 TEPSINQ96N21 525 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 MRIQ9BWK5 157 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 ZNF70Q9UC06 446 aaPredicted RBP8.26□□□□□ -1.09
TMEM116-208ENST00000549537 FZD1Q9UP38 647 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 SUGT1Q9Y2Z0 365 aa8.26□□□□□ -1.09
TMEM116-208ENST00000549537 PNMA6EA0A0J9YXQ4 647 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 SRGAP3O43295 1099 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 KDM4AO75164 1064 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
TMEM116-208ENST00000549537 RLBP1P12271 317 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 ADORA1P30542 326 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 NF2P35240 595 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 PHKA1P46020 1223 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
TMEM116-208ENST00000549537 RASA3Q14644 834 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 NBPF12Q5TAG4 269 aaPredicted RBP8.25□□□□□ -1.09
TMEM116-208ENST00000549537 ZKSCAN2Q63HK3 967 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 APOBEC3HQ6NTF7 200 aaKnown RBP8.25□□□□□ -1.09
TMEM116-208ENST00000549537 ARMC9Q7Z3E5 817 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 NLRP7Q8WX94 980 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 CLUAP1Q96AJ1 413 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 ZDHHC15Q96MV8 337 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 TDRD3Q9H7E2 651 aaKnown RBP8.25□□□□□ -1.09
TMEM116-208ENST00000549537 VEZTQ9HBM0 779 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 RNF186Q9NXI6 227 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 HTTP42858 3142 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 SALL1Q9NSC2 1324 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 SZT2Q5T011 3432 aa8.25□□□□□ -1.09
TMEM116-208ENST00000549537 UNCXA6NJT0 531 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 FRAT2O75474 233 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-208ENST00000549537 TRPA1O75762 1119 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 GNAI2P04899 355 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 CD46P15529 392 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
TMEM116-208ENST00000549537 TM4SF4P48230 202 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 PRKG1Q13976 671 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 SUPT20HL1Q3ZLR7 823 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 CCDC102BQ68D86 513 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 HHIPL2Q6UWX4 724 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 WDR66Q8TBY9 1149 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 TEKT1Q969V4 418 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 CLMNQ96JQ2 1002 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 TRAIPQ9BWF2 469 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 ANGEL1Q9UNK9 670 aaKnown RBP8.24□□□□□ -1.09
TMEM116-208ENST00000549537 CEP290O15078 2479 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 MAST3O60307 1309 aa8.24□□□□□ -1.09
TMEM116-208ENST00000549537 PDS5AQ29RF7 1337 aaKnown RBP8.24□□□□□ -1.09
TMEM116-208ENST00000549537 A0A1B0GUL7 405 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 CCDC85CA6NKD9 419 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 ZBTB7BO15156 539 aaPredicted RBP8.23□□□□□ -1.09
TMEM116-208ENST00000549537 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
TMEM116-208ENST00000549537 PRDX5P30044 214 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 GJA5P36382 358 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 TIMM10P62072 90 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 TFCP2Q12800 502 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 TNFAIP1Q13829 316 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 FOXD4L5Q5VV16 416 aaPredicted RBP8.23□□□□□ -1.09
TMEM116-208ENST00000549537 FKBP1CQ5VVH2 108 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 NPAS3Q8IXF0 933 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 FOXD4L4Q8WXT5 416 aaPredicted RBP8.23□□□□□ -1.09
TMEM116-208ENST00000549537 HPS1Q92902 700 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 XAGE2Q96GT9 111 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 TMEM39BQ9GZU3 492 aa8.23□□□□□ -1.09
TMEM116-208ENST00000549537 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
TMEM116-208ENST00000549537 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms