RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PNMA3Q9UL41 463 aa14.41□□□□□ -0.1
CSNK1E-212ENST00000494610 COG6Q9Y2V7 657 aa14.41□□□□□ -0.1
CSNK1E-212ENST00000494610 RPTORQ8N122 1335 aa14.41□□□□□ -0.1
CSNK1E-212ENST00000494610 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 GDF11O95390 407 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 RLBP1P12271 317 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 MCAMP43121 646 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 ADGRA1Q86SQ6 560 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 TEX11Q8IYF3 940 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 EXOC6Q8TAG9 804 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 NBPF3Q9H094 633 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 DNAJC18Q9H819 358 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 NDUFB9Q9Y6M9 179 aa14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 PDS5AQ29RF7 1337 aaKnown RBP14.4□□□□□ -0.1
CSNK1E-212ENST00000494610 USP17L5A8MUK1 530 aa14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 CCND3P30281 292 aaPredicted RBP14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 GCLCP48506 637 aaPredicted RBP14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 MAPKAPK5Q8IW41 473 aa14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 SLF2Q8IX21 1173 aa14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 PORCNQ9H237 461 aa14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 AATFQ9NY61 560 aaKnown RBP eCLIP14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 RBPJLQ9UBG7 517 aa14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 OGDHLQ9ULD0 1010 aa14.39□□□□□ -0.11
CSNK1E-212ENST00000494610 CDK5RAP2Q96SN8 1893 aa14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 GNAI3P08754 354 aa14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 BMP8BP34820 402 aa14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 CACNB2Q08289 660 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 SH3D19Q5HYK7 790 aa14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 MAP3K21Q5TCX8 1036 aa14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 MORF4L1Q9UBU8 362 aa14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 SAP30BPQ9UHR5 308 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-212ENST00000494610 PNMA6EA0A0J9YXQ4 647 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 HERVK_113P62684 666 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 MDM2Q00987 491 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 LRRC26Q2I0M4 334 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 ANKLE1Q8NAG6 615 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 PAGR1Q9BTK6 254 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 MTMR10Q9NXD2 777 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 PALD1Q9ULE6 856 aa14.37□□□□□ -0.11
CSNK1E-212ENST00000494610 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 ARID4AP29374 1257 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 BACE1P56817 501 aa14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 DYNLL1P63167 89 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 LHX8Q68G74 356 aa14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 TDHQ8IZJ6 230 aa14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 LRP2BPQ9P2M1 347 aa14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 AKAP2Q9Y2D5 859 aa14.36□□□□□ -0.11
CSNK1E-212ENST00000494610 LDHCP07864 332 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 COL6A1P12109 1028 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 GSTO1P78417 241 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 ZYXQ15942 572 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 GPRC5AQ8NFJ5 357 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 USP6NLQ92738 828 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 FAM161BQ96MY7 647 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 NUDT12Q9BQG2 462 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 WDR18Q9BV38 432 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 FLRT1Q9NZU1 646 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 PI4KBQ9UBF8 816 aa14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 COL2A1P02458 1487 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-212ENST00000494610 CNMDO75829 334 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 LRIT3Q3SXY7 679 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 GPR142Q7Z601 462 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 DBNDD2Q9BQY9 259 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 AS3MTQ9HBK9 375 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 TMOD4Q9NZQ9 345 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 ZBTB21Q9ULJ3 1066 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 FLT1P17948 1338 aa14.34□□□□□ -0.11
CSNK1E-212ENST00000494610 CYP2E1P05181 493 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 ZKSCAN1P17029 563 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 HOXA7P31268 230 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 ERVK-9P63128 1117 aa14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 ERVK-24P63145 666 aa14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 MTX1Q13505 466 aa14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 MORN1Q5T089 497 aa14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 NAA16Q6N069 864 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 PIH1D3Q9NQM4 214 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
CSNK1E-212ENST00000494610 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 USP17L10C9JJH3 530 aa14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 ATN1P54259 1190 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 EVX2Q03828 476 aa14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 CRACR2BQ8N4Y2 399 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 TLR7Q9NYK1 1049 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
CSNK1E-212ENST00000494610 GH2P01242 217 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 GNAI2P04899 355 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 ASNSP08243 561 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 XRCC5P13010 732 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 CAPN2P17655 700 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms