RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ERVK-24P63145 666 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 RING1Q06587 406 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 PDE4BQ07343 736 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 PODNQ7Z5L7 613 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 ZSCAN1Q8NBB4 408 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 RBBP8NLQ8NC74 664 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-207ENST00000513819 OR6P1Q8NGX9 317 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 TRIM55Q9BYV6 548 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 WNT10AQ9GZT5 417 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 DISC1Q9NRI5 854 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 NOP53Q9NZM5 478 aaKnown RBP6.61□□□□□ -1.35
NIPBL-207ENST00000513819 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
NIPBL-207ENST00000513819 ALX3O95076 343 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 SOX4Q06945 474 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-207ENST00000513819 RAB33AQ14088 237 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 BMS1Q14692 1282 aaKnown RBP6.6□□□□□ -1.35
NIPBL-207ENST00000513819 PPP2R5EQ16537 467 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 TNNI3KQ59H18 835 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 ZBTB37Q5TC79 503 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 OVOS1Q6IE37 1185 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 GIMAP6Q6P9H5 292 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 DYMQ7RTS9 669 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-207ENST00000513819 SMG8Q8ND04 991 aaKnown RBP6.6□□□□□ -1.35
NIPBL-207ENST00000513819 TNKS2Q9H2K2 1166 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 SUGCTQ9HAC7 445 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 ADAMTS8Q9UP79 889 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 TACC3Q9Y6A5 838 aa6.6□□□□□ -1.35
NIPBL-207ENST00000513819 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 CHURC1-FNTBB4DL54 471 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 F8W735 103 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-207ENST00000513819 HCLS1P14317 486 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-207ENST00000513819 SERINC3Q13530 473 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 MLECQ14165 292 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.35
NIPBL-207ENST00000513819 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 FDX2Q6P4F2 183 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 BEND7Q8N7W2 519 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-207ENST00000513819 RNF214Q8ND24 703 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 TMEM40Q8WWA1 233 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 ACSF2Q96CM8 615 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-207ENST00000513819 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 ATXN3LQ9H3M9 355 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 ACTR10Q9NZ32 417 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 USP21Q9UK80 565 aa6.59□□□□□ -1.35
NIPBL-207ENST00000513819 MEIS3P2A8K0S8 358 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 UPK3BL1B0FP48 263 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 UPK3BL2E5RIL1 263 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 K7ELQ4 463 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-207ENST00000513819 U2SURPO15042 1029 aaKnown RBP6.58□□□□□ -1.36
NIPBL-207ENST00000513819 FANCGO15287 622 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 SMARCA5O60264 1052 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-207ENST00000513819 TIAF1O95411 115 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 NEFMP07197 916 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 NTF4P34130 210 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 TMEM201Q5SNT2 666 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 LARP1BQ659C4 914 aaKnown RBP6.58□□□□□ -1.36
NIPBL-207ENST00000513819 UBE3DQ7Z6J8 389 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 ATG4CQ96DT6 458 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 FBRSQ9HAH7 460 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 ST7Q9NRC1 585 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 GMIPQ9P107 970 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 TJP2Q9UDY2 1190 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 ADAM30Q9UKF2 790 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 ACTL7BQ9Y614 415 aa6.58□□□□□ -1.36
NIPBL-207ENST00000513819 FAM86C2PA6NEL3 165 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 CCDC85CA6NKD9 419 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 COL8A1P27658 744 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 ASPAP45381 313 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 NKG7Q16617 165 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 ARSHQ5FYA8 562 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 TMEM130Q8N3G9 435 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 C2CD4AQ8NCU7 369 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-207ENST00000513819 FAM13CQ8NE31 585 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 ZNF507Q8TCN5 953 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 TM9SF2Q99805 663 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 AKTIPQ9H8T0 292 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 PIDD1Q9HB75 910 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 FAM105AQ9NUU6 356 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 SIRPGQ9P1W8 387 aa6.57□□□□□ -1.36
NIPBL-207ENST00000513819 CDK11AQ9UQ88 783 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-207ENST00000513819 A0A1W2PQH9 124 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 ACRP10323 421 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 NME1P15531 152 aaKnown RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 GUCY2CP25092 1073 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 PREPP48147 710 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 CASP7P55210 303 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 ZYXQ15942 572 aaKnown RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 ANKRD34AQ69YU3 496 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 TTC6Q86TZ1 520 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 NOP9Q86U38 636 aaKnown RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 MCATQ8IVS2 390 aaKnown RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 MICAL1Q8TDZ2 1067 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms