RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CTAGE8P0CG41 777 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 XPAP23025 273 aaPredicted RBP6.46□□□□□ -1.38
USP38-203ENST00000511739 CCDC129Q6ZRS4 1044 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 ZBTB33Q86T24 672 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 CTAGE6Q86UF2 777 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 CTAGE4Q8IX94 777 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 DCPSQ96C86 337 aaKnown RBP6.46□□□□□ -1.38
USP38-203ENST00000511739 CEP152O94986 1710 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 DDX39AO00148 427 aaKnown RBP6.46□□□□□ -1.38
USP38-203ENST00000511739 CD19P15391 556 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 ABI1Q8IZP0 508 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 PARD3BQ8TEW8 1205 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 MED10Q9BTT4 135 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 CHPF2Q9P2E5 772 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 PPME1Q9Y570 386 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 KRT86O43790 486 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 HOXB7P09629 217 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 SLC12A2P55011 1212 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 MAP7Q14244 749 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 SEC62Q99442 399 aaKnown RBP6.46□□□□□ -1.38
USP38-203ENST00000511739 PLIN2Q99541 437 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 AS3MTQ9HBK9 375 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 KAT6BQ8WYB5 2073 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 ADGRB3O60242 1522 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 P4HA1P13674 534 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 LETM2Q2VYF4 491 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 HAUS3Q68CZ6 603 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 SULF1Q8IWU6 871 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 PPIP5K2O43314 1243 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 TNFAIP3P21580 790 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 TNFAIP1Q13829 316 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 DIXDC1Q155Q3 683 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 AKAP4Q5JQC9 854 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 MAEAQ7L5Y9 396 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 CDCA7Q9BWT1 371 aaPredicted RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 NLRP1Q9C000 1473 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 GRM8O00222 908 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 CAVIN2O95810 425 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 SEPT6Q14141 434 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 PSMD6Q15008 389 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 MLXIPQ9HAP2 919 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 BTG4Q9NY30 223 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 ARHGEF10O15013 1369 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 KIAA0232Q92628 1395 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 PLEKHG1Q9ULL1 1385 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 TRAF5O00463 557 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 ALDH1L1O75891 902 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 CSPG5O95196 566 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 HIBADHP31937 336 aaKnown RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 HSPA2P54652 639 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 TSTA3Q13630 321 aaPredicted RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 SETDB1Q15047 1291 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 C8orf34Q49A92 452 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 DCUN1D2Q6PH85 259 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 CEP128Q6ZU80 1094 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 METTL13Q8N6R0 699 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 RHPN1Q8TCX5 695 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 SNX21Q969T3 373 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 GLT8D2Q9H1C3 349 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 GDPD2Q9HCC8 539 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 RBM28Q9NW13 759 aaKnown RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 PAG1Q9NWQ8 432 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 TRIM35Q9UPQ4 493 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 UGGT1Q9NYU2 1555 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 KIF11P52732 1056 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 YARSP54577 528 aaKnown RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 TTC22Q5TAA0 569 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 CASC4Q6P4E1 433 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 GADL1Q6ZQY3 521 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 SDCCAG8Q86SQ7 713 aaPredicted RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 IPO4Q8TEX9 1081 aaKnown RBP6.45□□□□□ -1.38
USP38-203ENST00000511739 CHMP6Q96FZ7 201 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 DCTPP1Q9H773 170 aa6.45□□□□□ -1.38
USP38-203ENST00000511739 MAP3K5Q99683 1374 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 UBXN1Q04323 297 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 ELMSAN1Q6PJG2 1045 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 FAM114A2Q9NRY5 505 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP38-203ENST00000511739 LMCD1Q9NZU5 365 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 ZNF449Q6P9G9 518 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 FEZ2Q9UHY8 353 aaPredicted RBP6.44□□□□□ -1.38
USP38-203ENST00000511739 TRPC6Q9Y210 931 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 ALDH1B1P30837 517 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 MAN1A1P33908 653 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 IFRD2Q12894 506 aaPredicted RBP6.44□□□□□ -1.38
USP38-203ENST00000511739 IP6K1Q92551 441 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 MRPS27Q92552 414 aaKnown RBP6.44□□□□□ -1.38
USP38-203ENST00000511739 TBC1D2Q9BYX2 928 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 LRFN2Q9ULH4 789 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 TYW5A2RUC4 315 aaKnown RBP6.44□□□□□ -1.38
USP38-203ENST00000511739 ESPNB1AK53 854 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 CAPN9O14815 690 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 CIB2O75838 187 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 SLC1A4P43007 532 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 TCP10Q12799 353 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 ZNF365Q70YC5 407 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 C8orf58Q8NAV2 365 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 SKA2Q8WVK7 121 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms