RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 ANP32CO43423 234 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 UBTFL1P0CB47 393 aaPredicted RBP10.77□□□□□ -0.69
VNN3-208ENST00000427187 CYP2B6P20813 491 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 BMP8BP34820 402 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 RHBDL3P58872 404 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 TIMM10P62072 90 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 MECOMQ03112 1051 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 PI16Q6UXB8 463 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 ZGPATQ8N5A5 531 aaKnown RBP10.77□□□□□ -0.69
VNN3-208ENST00000427187 PROCA1Q8NCQ7 364 aaPredicted RBP10.77□□□□□ -0.69
VNN3-208ENST00000427187 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 ASCC2Q9H1I8 757 aaPredicted RBP10.77□□□□□ -0.69
VNN3-208ENST00000427187 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
VNN3-208ENST00000427187 GJD2Q9UKL4 321 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 PFASO15067 1338 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 RPTORQ8N122 1335 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 ZNF521Q96K83 1311 aa10.77□□□□□ -0.69
VNN3-208ENST00000427187 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
VNN3-208ENST00000427187 TBC1D9Q6ZT07 1266 aa10.76□□□□□ -0.69
VNN3-208ENST00000427187 TDHQ8IZJ6 230 aa10.76□□□□□ -0.69
VNN3-208ENST00000427187 ANKLE1Q8NAG6 615 aa10.76□□□□□ -0.69
VNN3-208ENST00000427187 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
VNN3-208ENST00000427187 UBE2OQ9C0C9 1292 aaKnown RBP10.76□□□□□ -0.69
VNN3-208ENST00000427187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.76□□□□□ -0.69
VNN3-208ENST00000427187 SIPA1L1O43166 1804 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 GPR75-ASB3A0A0A6YYF3 556 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 A0A1B0GUL7 405 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
VNN3-208ENST00000427187 CAP2P40123 477 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 GCLCP48506 637 aaPredicted RBP10.75□□□□□ -0.69
VNN3-208ENST00000427187 TFCP2Q12800 502 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 MTMR2Q13614 643 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 SHROOM1Q2M3G4 852 aaPredicted RBP10.75□□□□□ -0.69
VNN3-208ENST00000427187 ERICH6Q7L0X2 663 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 SLF2Q8IX21 1173 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 XAGE2Q96GT9 111 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 OSBPL5Q9H0X9 879 aaPredicted RBP10.75□□□□□ -0.69
VNN3-208ENST00000427187 TXNRD2Q9NNW7 524 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 MTMR10Q9NXD2 777 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 OGDHLQ9ULD0 1010 aa10.75□□□□□ -0.69
VNN3-208ENST00000427187 LAMA2P24043 3122 aaKnown RBP10.75□□□□□ -0.69
VNN3-208ENST00000427187 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 TBC1D12O60347 775 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
VNN3-208ENST00000427187 IRX3P78415 501 aaPredicted RBP10.74□□□□□ -0.69
VNN3-208ENST00000427187 JAG1P78504 1218 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
VNN3-208ENST00000427187 CCL14Q16627 93 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
VNN3-208ENST00000427187 FAM161BQ96MY7 647 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 STXBP5LQ9Y2K9 1186 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 CDH23Q9H251 3354 aa10.74□□□□□ -0.69
VNN3-208ENST00000427187 CAPN2P17655 700 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
VNN3-208ENST00000427187 LRRC26Q2I0M4 334 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 SPTY2D1Q68D10 685 aaPredicted RBP10.73□□□□□ -0.69
VNN3-208ENST00000427187 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 TEX11Q8IYF3 940 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
VNN3-208ENST00000427187 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
VNN3-208ENST00000427187 CDCA7LQ96GN5 454 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 P2RX7Q99572 595 aaKnown RBP10.73□□□□□ -0.69
VNN3-208ENST00000427187 MEIS3Q99687 375 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 COPRSQ9NQ92 184 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 RAI14Q9P0K7 980 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 HMG20BQ9P0W2 317 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 MORF4L1Q9UBU8 362 aa10.73□□□□□ -0.69
VNN3-208ENST00000427187 NOB1Q9ULX3 412 aaKnown RBP10.73□□□□□ -0.69
VNN3-208ENST00000427187 FRMPD3Q5JV73 1810 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
VNN3-208ENST00000427187 DNAH12Q6ZR08 3092 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 GDF11O95390 407 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
VNN3-208ENST00000427187 CACNB2Q08289 660 aaPredicted RBP10.72□□□□□ -0.69
VNN3-208ENST00000427187 SH3D19Q5HYK7 790 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 MAP3K21Q5TCX8 1036 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 SPATA5Q8NB90 893 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 NUDT12Q9BQG2 462 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 PAGR1Q9BTK6 254 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
VNN3-208ENST00000427187 PORCNQ9H237 461 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 DNAJC18Q9H819 358 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 TMOD4Q9NZQ9 345 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 NDUFB9Q9Y6M9 179 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 PDS5AQ29RF7 1337 aaKnown RBP10.72□□□□□ -0.69
VNN3-208ENST00000427187 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
VNN3-208ENST00000427187 E9PSI1 815 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 SRGAP3O43295 1099 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 COL2A1P02458 1487 aaPredicted RBP10.71□□□□□ -0.69
VNN3-208ENST00000427187 COL6A1P12109 1028 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 BACE1P56817 501 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 HERVK_113P62684 666 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 SLFN5Q08AF3 891 aa10.71□□□□□ -0.69
VNN3-208ENST00000427187 MVPQ14764 893 aaKnown RBP10.71□□□□□ -0.69
VNN3-208ENST00000427187 Q3C1V9 767 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms