RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 CXCL6P80162 114 aa4.84□□□□□ -1.63
SYNCRIP-203ENST00000444272 APOC3P02656 99 aa4.83□□□□□ -1.64
SYNCRIP-203ENST00000444272 SNAPINO95295 136 aa4.81□□□□□ -1.64
SYNCRIP-203ENST00000444272 P0C880 135 aa4.81□□□□□ -1.64
SYNCRIP-203ENST00000444272 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
SYNCRIP-203ENST00000444272 TRIAP1O43715 76 aa4.79□□□□□ -1.64
SYNCRIP-203ENST00000444272 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-203ENST00000444272 A0A0B4J2C4 111 aa4.78□□□□□ -1.64
SYNCRIP-203ENST00000444272 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
SYNCRIP-203ENST00000444272 CASC2Q6XLA1 102 aa4.75□□□□□ -1.65
SYNCRIP-203ENST00000444272 SVBPQ8N300 66 aa4.75□□□□□ -1.65
SYNCRIP-203ENST00000444272 NREPQ16612 68 aa4.74□□□□□ -1.65
SYNCRIP-203ENST00000444272 PAM16Q9Y3D7 125 aa4.74□□□□□ -1.65
SYNCRIP-203ENST00000444272 C20orf197Q8N268 126 aa4.72□□□□□ -1.65
SYNCRIP-203ENST00000444272 A0A1B0GW54 56 aa4.71□□□□□ -1.66
SYNCRIP-203ENST00000444272 SNRPEP62304 92 aaKnown RBP4.71□□□□□ -1.66
SYNCRIP-203ENST00000444272 BATFQ16520 125 aa4.7□□□□□ -1.66
SYNCRIP-203ENST00000444272 NDUFA5Q16718 116 aa4.68□□□□□ -1.66
SYNCRIP-203ENST00000444272 CEND1Q8N111 149 aa4.68□□□□□ -1.66
SYNCRIP-203ENST00000444272 COA6Q5JTJ3 125 aaKnown RBP4.67□□□□□ -1.66
SYNCRIP-203ENST00000444272 PRO1854Q9UHT4 67 aa4.67□□□□□ -1.66
SYNCRIP-203ENST00000444272 A0A1W2PPM0 123 aa4.65□□□□□ -1.67
SYNCRIP-203ENST00000444272 K7EP34 96 aa4.63□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BKO60814 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BJP06899 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BOP23527 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BBP33778 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BDP58876 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BCP62807 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST2H2BEQ16778 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 Q8N9L7 120 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BHQ93079 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BNQ99877 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 HIST1H2BMQ99879 126 aa4.61□□□□□ -1.67
SYNCRIP-203ENST00000444272 MT-ATP8P03928 68 aa4.6□□□□□ -1.67
SYNCRIP-203ENST00000444272 PSMB2P49721 201 aa4.6□□□□□ -1.67
SYNCRIP-203ENST00000444272 HSBP1L1C9JCN9 74 aa4.59□□□□□ -1.67
SYNCRIP-203ENST00000444272 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
SYNCRIP-203ENST00000444272 A0A0D9SG42 100 aa4.58□□□□□ -1.68
SYNCRIP-203ENST00000444272 NAA38Q9BRA0 125 aaKnown RBP4.56□□□□□ -1.68
SYNCRIP-203ENST00000444272 BPY2O14599 106 aa4.55□□□□□ -1.68
SYNCRIP-203ENST00000444272 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
SYNCRIP-203ENST00000444272 COX6CP09669 75 aa4.54□□□□□ -1.68
SYNCRIP-203ENST00000444272 BAALC-AS2P0C853 105 aa4.53□□□□□ -1.68
SYNCRIP-203ENST00000444272 HIST3H2BBQ8N257 126 aa4.53□□□□□ -1.68
SYNCRIP-203ENST00000444272 C14orf132Q9NPU4 83 aa4.5□□□□□ -1.69
SYNCRIP-203ENST00000444272 JMJD7-PLA2G4BH0Y9G9 81 aa4.49□□□□□ -1.69
SYNCRIP-203ENST00000444272 COX8AP10176 69 aa4.47□□□□□ -1.69
SYNCRIP-203ENST00000444272 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
SYNCRIP-203ENST00000444272 ACYP1P07311 99 aa4.46□□□□□ -1.7
SYNCRIP-203ENST00000444272 FXYD2P54710 66 aa4.45□□□□□ -1.7
SYNCRIP-203ENST00000444272 HIST1H2BLQ99880 126 aa4.44□□□□□ -1.7
SYNCRIP-203ENST00000444272 C9orf118A6NHY6 69 aa4.43□□□□□ -1.7
SYNCRIP-203ENST00000444272 DLEU1O43261 78 aa4.41□□□□□ -1.7
SYNCRIP-203ENST00000444272 HIGD1BQ9P298 99 aa4.41□□□□□ -1.7
SYNCRIP-203ENST00000444272 K7ERJ3 54 aa4.4□□□□□ -1.71
SYNCRIP-203ENST00000444272 TP53AIP1Q9HCN2 124 aa4.39□□□□□ -1.71
SYNCRIP-203ENST00000444272 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
SYNCRIP-203ENST00000444272 SCGB1C2P0DMR2 95 aa4.35□□□□□ -1.71
SYNCRIP-203ENST00000444272 C14orf144Q96I85 54 aa4.35□□□□□ -1.71
SYNCRIP-203ENST00000444272 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.71
SYNCRIP-203ENST00000444272 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
SYNCRIP-203ENST00000444272 LOC101927531A0A1B0GV80 90 aa4.31□□□□□ -1.72
SYNCRIP-203ENST00000444272 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
SYNCRIP-203ENST00000444272 ATXN8Q156A1 80 aa4.24□□□□□ -1.73
SYNCRIP-203ENST00000444272 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
SYNCRIP-203ENST00000444272 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
SYNCRIP-203ENST00000444272 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
SYNCRIP-203ENST00000444272 VAMP8Q9BV40 100 aa4.18□□□□□ -1.74
SYNCRIP-203ENST00000444272 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
SYNCRIP-203ENST00000444272 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
SYNCRIP-203ENST00000444272 SPATA45Q537H7 98 aa4.13□□□□□ -1.75
SYNCRIP-203ENST00000444272 S100A2P29034 98 aa4.11□□□□□ -1.75
SYNCRIP-203ENST00000444272 MT1AP04731 61 aa4.1□□□□□ -1.75
SYNCRIP-203ENST00000444272 HSD52Q0P140 79 aa4.08□□□□□ -1.76
SYNCRIP-203ENST00000444272 SPCS1Q9Y6A9 102 aa4.05□□□□□ -1.76
SYNCRIP-203ENST00000444272 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
SYNCRIP-203ENST00000444272 H0Y9P7 68 aa3.99□□□□□ -1.77
SYNCRIP-203ENST00000444272 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
SYNCRIP-203ENST00000444272 ATOX1O00244 68 aa3.96□□□□□ -1.78
SYNCRIP-203ENST00000444272 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
SYNCRIP-203ENST00000444272 UBL5Q9BZL1 73 aa3.95□□□□□ -1.78
SYNCRIP-203ENST00000444272 TSTD3H0UI37 97 aa3.92□□□□□ -1.78
SYNCRIP-203ENST00000444272 UQCRQO14949 82 aa3.85□□□□□ -1.79
SYNCRIP-203ENST00000444272 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
SYNCRIP-203ENST00000444272 LINC00208Q96KT6 92 aa3.84□□□□□ -1.79
SYNCRIP-203ENST00000444272 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
SYNCRIP-203ENST00000444272 H3BT86 120 aa3.8□□□□□ -1.8
SYNCRIP-203ENST00000444272 MT3P25713 68 aa3.8□□□□□ -1.8
SYNCRIP-203ENST00000444272 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
SYNCRIP-203ENST00000444272 TNP1P09430 55 aa3.78□□□□□ -1.8
SYNCRIP-203ENST00000444272 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
SYNCRIP-203ENST00000444272 S100A6P06703 90 aa3.76□□□□□ -1.81
SYNCRIP-203ENST00000444272 S100A1P23297 94 aa3.75□□□□□ -1.81
SYNCRIP-203ENST00000444272 TRAV7A0A075B6U4 112 aa3.74□□□□□ -1.81
SYNCRIP-203ENST00000444272 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
SYNCRIP-203ENST00000444272 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
SYNCRIP-203ENST00000444272 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
SYNCRIP-203ENST00000444272 TAX1BP3O14907 124 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms