RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PRKDCP78527 4128 aaKnown RBP4.26□□□□□ -1.73
TGFBR3-209ENST00000532540 TNP2Q05952 138 aa4.26□□□□□ -1.73
TGFBR3-209ENST00000532540 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
TGFBR3-209ENST00000532540 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
TGFBR3-209ENST00000532540 SSBP3-AS1Q7Z2R9 100 aa4.26□□□□□ -1.73
TGFBR3-209ENST00000532540 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
TGFBR3-209ENST00000532540 H3BNG1 76 aa4.24□□□□□ -1.73
TGFBR3-209ENST00000532540 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
TGFBR3-209ENST00000532540 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
TGFBR3-209ENST00000532540 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
TGFBR3-209ENST00000532540 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
TGFBR3-209ENST00000532540 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
TGFBR3-209ENST00000532540 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
TGFBR3-209ENST00000532540 RTL8CO15255 209 aa4.21□□□□□ -1.73
TGFBR3-209ENST00000532540 TLX1NBP0CAT3 122 aa4.21□□□□□ -1.74
TGFBR3-209ENST00000532540 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
TGFBR3-209ENST00000532540 CSMD3Q7Z407 3707 aa4.2□□□□□ -1.74
TGFBR3-209ENST00000532540 FAM229AH3BQW9 127 aa4.2□□□□□ -1.74
TGFBR3-209ENST00000532540 A0A087WTM6 91 aa4.19□□□□□ -1.74
TGFBR3-209ENST00000532540 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
TGFBR3-209ENST00000532540 SPRR1AP35321 89 aa4.19□□□□□ -1.74
TGFBR3-209ENST00000532540 LINC00472Q9H8W2 130 aa4.18□□□□□ -1.74
TGFBR3-209ENST00000532540 A0A087X002 238 aa4.18□□□□□ -1.74
TGFBR3-209ENST00000532540 CIRBP-AS1Q8TBR5 109 aa4.18□□□□□ -1.74
TGFBR3-209ENST00000532540 KRTAP10-2P60368 255 aa4.16□□□□□ -1.74
TGFBR3-209ENST00000532540 RYR3Q15413 4870 aa4.16□□□□□ -1.74
TGFBR3-209ENST00000532540 Q6ZR54 194 aa4.15□□□□□ -1.75
TGFBR3-209ENST00000532540 CMYA5Q8N3K9 4069 aa4.14□□□□□ -1.75
TGFBR3-209ENST00000532540 ROMO1P60602 79 aa4.14□□□□□ -1.75
TGFBR3-209ENST00000532540 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
TGFBR3-209ENST00000532540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.12□□□□□ -1.75
TGFBR3-209ENST00000532540 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
TGFBR3-209ENST00000532540 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
TGFBR3-209ENST00000532540 ANAPC11Q9NYG5 84 aa4.11□□□□□ -1.75
TGFBR3-209ENST00000532540 PLAC8Q9NZF1 115 aa4.11□□□□□ -1.75
TGFBR3-209ENST00000532540 PANO1I0J062 215 aa4.09□□□□□ -1.75
TGFBR3-209ENST00000532540 IGLV7-43P04211 117 aa4.09□□□□□ -1.75
TGFBR3-209ENST00000532540 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
TGFBR3-209ENST00000532540 CRIPTQ9P021 101 aa4.09□□□□□ -1.76
TGFBR3-209ENST00000532540 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
TGFBR3-209ENST00000532540 SPRR1BP22528 89 aa4.08□□□□□ -1.76
TGFBR3-209ENST00000532540 KRTAP26-1Q6PEX3 210 aa4.08□□□□□ -1.76
TGFBR3-209ENST00000532540 A0A1B0GU33 70 aa4.07□□□□□ -1.76
TGFBR3-209ENST00000532540 HUWE1Q7Z6Z7 4374 aaKnown RBP4.06□□□□□ -1.76
TGFBR3-209ENST00000532540 ZNF861PO60384 105 aa4.05□□□□□ -1.76
TGFBR3-209ENST00000532540 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
TGFBR3-209ENST00000532540 Q5W150 140 aa4.04□□□□□ -1.76
TGFBR3-209ENST00000532540 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
TGFBR3-209ENST00000532540 Q8N1X5 172 aa4.03□□□□□ -1.76
TGFBR3-209ENST00000532540 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
TGFBR3-209ENST00000532540 DNAH9Q9NYC9 4486 aa4.02□□□□□ -1.77
TGFBR3-209ENST00000532540 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
TGFBR3-209ENST00000532540 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
TGFBR3-209ENST00000532540 A8MUU9 505 aa4□□□□□ -1.77
TGFBR3-209ENST00000532540 J3QL48 77 aa3.99□□□□□ -1.77
TGFBR3-209ENST00000532540 Q96NJ1 140 aa3.99□□□□□ -1.77
TGFBR3-209ENST00000532540 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
TGFBR3-209ENST00000532540 HYDINQ4G0P3 5121 aa3.98□□□□□ -1.77
TGFBR3-209ENST00000532540 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
TGFBR3-209ENST00000532540 LINC00483Q53H64 154 aa3.97□□□□□ -1.77
TGFBR3-209ENST00000532540 Q5VSD8 79 aa3.96□□□□□ -1.78
TGFBR3-209ENST00000532540 KRTAP11-1Q8IUC1 163 aa3.96□□□□□ -1.78
TGFBR3-209ENST00000532540 A0A0D9SG42 100 aa3.96□□□□□ -1.78
TGFBR3-209ENST00000532540 KRTAP7-1Q8IUC3 87 aa3.95□□□□□ -1.78
TGFBR3-209ENST00000532540 PLECQ15149 4684 aaKnown RBP3.95□□□□□ -1.78
TGFBR3-209ENST00000532540 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
TGFBR3-209ENST00000532540 TYMSOSQ8TAI1 123 aa3.94□□□□□ -1.78
TGFBR3-209ENST00000532540 RYR2Q92736 4967 aa3.94□□□□□ -1.78
TGFBR3-209ENST00000532540 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
TGFBR3-209ENST00000532540 C20orf166-AS1Q96NR2 134 aa3.94□□□□□ -1.78
TGFBR3-209ENST00000532540 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
TGFBR3-209ENST00000532540 STARD9Q9P2P6 4700 aa3.93□□□□□ -1.78
TGFBR3-209ENST00000532540 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
TGFBR3-209ENST00000532540 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
TGFBR3-209ENST00000532540 DNAH3Q8TD57 4116 aa3.91□□□□□ -1.78
TGFBR3-209ENST00000532540 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
TGFBR3-209ENST00000532540 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.78
TGFBR3-209ENST00000532540 FRAS1Q86XX4 4008 aa3.9□□□□□ -1.78
TGFBR3-209ENST00000532540 RYR1P21817 5038 aa3.9□□□□□ -1.79
TGFBR3-209ENST00000532540 LYSTQ99698 3801 aa3.9□□□□□ -1.79
TGFBR3-209ENST00000532540 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
TGFBR3-209ENST00000532540 DNAH10Q8IVF4 4471 aa3.86□□□□□ -1.79
TGFBR3-209ENST00000532540 KIAA1109Q2LD37 5005 aa3.85□□□□□ -1.79
TGFBR3-209ENST00000532540 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
TGFBR3-209ENST00000532540 Q6ZSA8 131 aa3.85□□□□□ -1.79
TGFBR3-209ENST00000532540 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
TGFBR3-209ENST00000532540 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.8
TGFBR3-209ENST00000532540 H0YAA0 97 aa3.83□□□□□ -1.8
TGFBR3-209ENST00000532540 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
TGFBR3-209ENST00000532540 A0A1B0GVY2 172 aa3.81□□□□□ -1.8
TGFBR3-209ENST00000532540 P0C880 135 aa3.81□□□□□ -1.8
TGFBR3-209ENST00000532540 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
TGFBR3-209ENST00000532540 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
TGFBR3-209ENST00000532540 KRTAP13-1Q8IUC0 172 aa3.79□□□□□ -1.8
TGFBR3-209ENST00000532540 FAT1Q14517 4588 aa3.79□□□□□ -1.8
TGFBR3-209ENST00000532540 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
TGFBR3-209ENST00000532540 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
TGFBR3-209ENST00000532540 COX6B2Q6YFQ2 88 aa3.77□□□□□ -1.81
TGFBR3-209ENST00000532540 DNAH5Q8TE73 4624 aa3.76□□□□□ -1.81
TGFBR3-209ENST00000532540 SEC61BP60468 96 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms