RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SPINK6Q6UWN8 80 aa3.48□□□□□ -1.85
ATXN3-226ENST00000554350 LINC00269Q8N2A0 174 aa3.48□□□□□ -1.85
ATXN3-226ENST00000554350 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-226ENST00000554350 OBSCN-AS1Q96MR7 158 aa3.48□□□□□ -1.85
ATXN3-226ENST00000554350 TMEM126AQ9H061 195 aa3.48□□□□□ -1.85
ATXN3-226ENST00000554350 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 A0A0U1RRA0 63 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 MT-ATP8P03928 68 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 ANGP03950 147 aaKnown RBP3.47□□□□□ -1.85
ATXN3-226ENST00000554350 PRR3P79522 188 aaKnown RBP3.47□□□□□ -1.85
ATXN3-226ENST00000554350 GAGE2BQ13066 116 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 GAGE2EQ4V326 116 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 SMIM11BQ8TCY0 68 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 LINC00167Q96N53 147 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 GAGE2DQ9UEU5 116 aa3.47□□□□□ -1.85
ATXN3-226ENST00000554350 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
ATXN3-226ENST00000554350 TRBV7-7A0A0K0K1E9 115 aa3.46□□□□□ -1.86
ATXN3-226ENST00000554350 DNAL4O96015 105 aa3.46□□□□□ -1.86
ATXN3-226ENST00000554350 PFN2P35080 140 aa3.46□□□□□ -1.86
ATXN3-226ENST00000554350 LINC00643Q86TS7 51 aa3.46□□□□□ -1.86
ATXN3-226ENST00000554350 JMJD7-PLA2G4BH0Y9G9 81 aa3.45□□□□□ -1.86
ATXN3-226ENST00000554350 ENHOQ6UWT2 76 aa3.45□□□□□ -1.86
ATXN3-226ENST00000554350 FAM218AQ96MZ4 157 aa3.45□□□□□ -1.86
ATXN3-226ENST00000554350 C22orf24Q9Y442 160 aa3.45□□□□□ -1.86
ATXN3-226ENST00000554350 TRBV7-6A0A0J9YX20 115 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 CHTF8P0CG12 524 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 SPAG11BQ08648 103 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 OR13C6PQ8NH95 151 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 C2orf48Q96LS8 159 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 ORMDL1Q9P0S3 153 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
ATXN3-226ENST00000554350 IGLV6-57P01721 117 aa3.43□□□□□ -1.86
ATXN3-226ENST00000554350 C9orf163Q8N9P6 203 aa3.43□□□□□ -1.86
ATXN3-226ENST00000554350 KLK12Q9UKR0 248 aa3.43□□□□□ -1.86
ATXN3-226ENST00000554350 USP17L23D6RBM5 183 aa3.42□□□□□ -1.86
ATXN3-226ENST00000554350 PDE6GP18545 87 aa3.42□□□□□ -1.86
ATXN3-226ENST00000554350 S100A7L2Q5SY68 101 aa3.42□□□□□ -1.86
ATXN3-226ENST00000554350 KRTAP26-1Q6PEX3 210 aa3.42□□□□□ -1.86
ATXN3-226ENST00000554350 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
ATXN3-226ENST00000554350 IGLV10-54A0A075B6I4 117 aa3.41□□□□□ -1.86
ATXN3-226ENST00000554350 NDUFV3P56181 108 aaKnown RBP3.41□□□□□ -1.86
ATXN3-226ENST00000554350 CLPSL2Q6UWE3 100 aa3.41□□□□□ -1.86
ATXN3-226ENST00000554350 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
ATXN3-226ENST00000554350 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
ATXN3-226ENST00000554350 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
ATXN3-226ENST00000554350 hADV29S1A0JD25 119 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 CCKP06307 115 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 TLX1NBP0CAT3 122 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 CRYGAP11844 174 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 C6orf99Q4VX62 202 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 SPACA4Q8TDM5 124 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 PLAC8Q9NZF1 115 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 C6orf48Q9UBA6 75 aa3.4□□□□□ -1.87
ATXN3-226ENST00000554350 LOC110117498A0A087WWA1 95 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 TRBV10-3A0A0K0K1G6 114 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 NDUFC2-KCTD14E9PQ53 114 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 M0R378 163 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
ATXN3-226ENST00000554350 Q6JHZ5 121 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-226ENST00000554350 CAMK2N2Q96S95 79 aa3.39□□□□□ -1.87
ATXN3-226ENST00000554350 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 BCE1O60756 84 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 VPREB1P12018 145 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 C9orf116Q5BN46 136 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-226ENST00000554350 GAGE2AQ6NT46 116 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 Q6ZRP5 223 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 SMCR5Q8TEV8 140 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 DIRC1Q969H9 104 aa3.38□□□□□ -1.87
ATXN3-226ENST00000554350 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 NCR3O14931 201 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 ZNF73O43830 326 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-226ENST00000554350 ELOF1P60002 83 aaKnown RBP3.37□□□□□ -1.87
ATXN3-226ENST00000554350 HIST1H4AP62805 103 aaKnown RBP3.37□□□□□ -1.87
ATXN3-226ENST00000554350 RBM3P98179 157 aaKnown RBP3.37□□□□□ -1.87
ATXN3-226ENST00000554350 SYCNQ0VAF6 134 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 Q8NDZ9 215 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 C14orf132Q9NPU4 83 aa3.37□□□□□ -1.87
ATXN3-226ENST00000554350 A0A1B0GW54 56 aa3.36□□□□□ -1.87
ATXN3-226ENST00000554350 COX7BP24311 80 aa3.36□□□□□ -1.87
ATXN3-226ENST00000554350 RPL18AQ02543 176 aaKnown RBP3.36□□□□□ -1.87
ATXN3-226ENST00000554350 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
ATXN3-226ENST00000554350 KCNQ1DNQ9H478 68 aa3.36□□□□□ -1.87
ATXN3-226ENST00000554350 LINC00846Q9NV44 126 aa3.36□□□□□ -1.87
ATXN3-226ENST00000554350 ATOX1O00244 68 aa3.35□□□□□ -1.87
ATXN3-226ENST00000554350 CNBPP62633 177 aaKnown RBP3.35□□□□□ -1.87
ATXN3-226ENST00000554350 Q6ZQT0 140 aa3.35□□□□□ -1.87
ATXN3-226ENST00000554350 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
ATXN3-226ENST00000554350 UBL5Q9BZL1 73 aa3.35□□□□□ -1.87
ATXN3-226ENST00000554350 TRBV7-4A0A0J9YYF1 115 aa3.34□□□□□ -1.87
ATXN3-226ENST00000554350 FAM236AA0A1B0GUQ0 79 aa3.34□□□□□ -1.87
ATXN3-226ENST00000554350 FAM236BA0A1B0GV22 79 aa3.34□□□□□ -1.87
ATXN3-226ENST00000554350 UQCRQO14949 82 aa3.34□□□□□ -1.87
ATXN3-226ENST00000554350 Q6ZQY7 126 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms