RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 PMVKQ15126 192 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 LCE3EQ5T5B0 92 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 FA2HQ7L5A8 372 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 CLEC2BQ92478 149 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 TOMM6Q96B49 74 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 CYSLTR1Q9Y271 337 aa0.65□□□□□ -2.31
RNU1-48P-201ENST00000516400 MT1AP04731 61 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 CKS2P33552 79 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 RPL23P62829 140 aaKnown RBP0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 PYDC2Q56P42 97 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 ERASQ7Z444 233 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 Q8N8P6 123 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 SFT2D1Q8WV19 159 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 PRAC1Q96KF2 57 aa0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 SPANXB1Q9NS25 103 aaPredicted RBP0.64□□□□□ -2.31
RNU1-48P-201ENST00000516400 A0A1B0GXF2 115 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 A8MUN3 132 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 GATCO43716 136 aaKnown RBP0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 ATP6V1G2O95670 118 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 OCIAD2Q56VL3 154 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 Q5W150 140 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 Q6JHZ5 121 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 SFTA2Q6UW10 78 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 KCNRGQ8N5I3 272 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 V9GYV3 84 aa0.63□□□□□ -2.31
RNU1-48P-201ENST00000516400 A0A087WVE0 104 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 TRBV7-6A0A0J9YX20 115 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 LINC01546A6NGU7 62 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 K7EMI3 77 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 PPBPP02775 128 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 IL7P13232 177 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 OCR1Q9BZK8 76 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 BIN3Q9NQY0 253 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 MUC19Q7Z5P9 8384 aa0.62□□□□□ -2.31
RNU1-48P-201ENST00000516400 IGKV3D-7A0A0C4DH55 119 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 A0A0J9YXY3 114 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 SMIM27A0A1W2PRY6 76 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 TMEM223A0PJW6 202 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 C11orf86A6NJI1 115 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 LYRM1O43325 122 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 COX7BP24311 80 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 S100A12P80511 92 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 C4orf26Q17RF5 130 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 FAM74A3Q4VXF1 159 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 ORMDL2Q53FV1 153 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 OSTCQ9NRP0 149 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 S4R3F8 94 aa0.61□□□□□ -2.31
RNU1-48P-201ENST00000516400 A0A096LNJ9 63 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 A0A1B0GV50 99 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 ZNF815PA8K554 130 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 H3BRM9 83 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 PFDN1O60925 122 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 PDE6GP18545 87 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 S100A7L2Q5SY68 101 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 AKR1C8PQ5T2L2 129 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 TEN1Q86WV5 123 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 PRELID3AQ96N28 172 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 SS18L2Q9UHA2 77 aa0.6□□□□□ -2.31
RNU1-48P-201ENST00000516400 PDE6DO43924 150 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 IGKV4-1P06312 121 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 C3orf79P0CE67 100 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 PET100P0DJ07 73 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 TSPEAR-AS2P59090 65 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 MEIG1Q5JSS6 88 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 ORMDL3Q8N138 153 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 SCGB3A1Q96QR1 104 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 MANBALQ9NQG1 85 aa0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 NHP2Q9NX24 153 aaKnown RBP0.59□□□□□ -2.31
RNU1-48P-201ENST00000516400 IGHV6-1A0A0B4J1U7 121 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 A0A1B0GW15 77 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 CENPXA8MT69 81 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 HINT1P49773 126 aaPredicted RBP0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 HERV-K104P63124 156 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 DEFB116Q30KQ4 102 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 FAM213BQ8TBF2 198 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 RAB37Q96AX2 223 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 C10orf95Q9H7T3 257 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 GNG13Q9P2W3 67 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 NAT8BQ9UHF3 227 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 LAMTOR2Q9Y2Q5 125 aa0.58□□□□□ -2.32
RNU1-48P-201ENST00000516400 BORCS7-ASMTA0A0B4J1R7 106 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 TRAV13-2A0A0B4J235 113 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 A0A1B0GVX0 72 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 UMAD1C9J7I0 102 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 C8orf87E5RJ46 101 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 H3BUT2 72 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 IFITM3Q01628 133 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 LINC00518Q8N0U6 118 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 BORCS7Q96B45 105 aa0.57□□□□□ -2.32
RNU1-48P-201ENST00000516400 A0A0D9SG42 100 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 K7EQZ3 153 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 P0C880 135 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 NDUFV3P56181 108 aaKnown RBP0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 TRIQKQ629K1 86 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 SIGMAR1Q99720 223 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 SPANXDQ9BXN6 97 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 MAP1LC3CQ9BXW4 147 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 MAP1LC3AQ9H492 121 aa0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 NXT2Q9NPJ8 142 aaKnown RBP0.56□□□□□ -2.32
RNU1-48P-201ENST00000516400 LINC00587B1AMM8 73 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms