RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 Q1RN00 199 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 ANKRD39Q53RE8 183 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 GAGE2AQ6NT46 116 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 ARL17AQ8IVW1 177 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 Q8NBF4 154 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 Q8NDZ9 215 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 TTTY13Q9BZ97 58 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 DHRS4-AS1Q9P1J3 65 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 IGLV9-49A0A0B4J1Y8 123 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 A4D1N5 150 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 C5orf52A6NGY3 159 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 B5MCH6 92 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 SNCGO76070 127 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 ELOF1P60002 83 aaKnown RBP1.68□□□□□ -2.14
TCOF1-208ENST00000506063 VAMP3Q15836 100 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 C6orf99Q4VX62 202 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 SPATA45Q537H7 98 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 SOSTDC1Q6X4U4 206 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 PCP2Q8IVA1 136 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 SMCR5Q8TEV8 140 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 RAB37Q96AX2 223 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 HIST1H4GQ99525 98 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 LITAFQ99732 161 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 LIMD2Q9BT23 127 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 KRTAP4-9Q9BYQ8 210 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 LAMTOR3Q9UHA4 124 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 TMA7Q9Y2S6 64 aaKnown RBP1.68□□□□□ -2.14
TCOF1-208ENST00000506063 PAM16Q9Y3D7 125 aa1.68□□□□□ -2.14
TCOF1-208ENST00000506063 TRBV7-6A0A0J9YX20 115 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 COX8AP10176 69 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 SPRR2DP22532 72 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 LINC00483Q53H64 154 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 BVES-AS1Q5T3Y7 98 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 ADAMTSL4-AS1Q5T5F5 129 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 LCE3BQ5TA77 95 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 C12orf57Q99622 126 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 Q9BRP9 147 aa1.67□□□□□ -2.14
TCOF1-208ENST00000506063 DNAL4O96015 105 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 SPINK1P00995 79 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 GHRHP01286 108 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 RPS29P62273 56 aaKnown RBP1.66□□□□□ -2.14
TCOF1-208ENST00000506063 TAL2Q16559 108 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 Q6Q795 121 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 MUSTN1Q8IVN3 82 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
TCOF1-208ENST00000506063 A0A0B4J2C4 111 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 TEX49A0A1B0GTD5 131 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 C9orf92A6NGG3 77 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 A6NN06 94 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 H7C2G1 150 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 DLEU1O43261 78 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 EIF4EBP3O60516 100 aaPredicted RBP1.65□□□□□ -2.15
TCOF1-208ENST00000506063 ERC2-IT1O76042 136 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 RPL37P61927 97 aaKnown RBP1.65□□□□□ -2.15
TCOF1-208ENST00000506063 HSD52Q0P140 79 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 ST20-AS1Q8NBB2 130 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 HIGD1BQ9P298 99 aa1.65□□□□□ -2.15
TCOF1-208ENST00000506063 LOC100996750A0A140TA64 210 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 hADV29S1A0JD25 119 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 COX6CP09669 75 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 SMIM6P0DI80 62 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 SPRR1BP22528 89 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 OCIAD2Q56VL3 154 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 Q6ZQY7 126 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 SSBP3-AS1Q7Z2R9 100 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 CEND1Q8N111 149 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 PPDPFLQ8WWR9 84 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 CLEC2BQ92478 149 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 C14orf144Q96I85 54 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 KRTAP4-6Q9BYQ5 205 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 PRO1933Q9H354 126 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 UQCR10Q9UDW1 63 aa1.64□□□□□ -2.15
TCOF1-208ENST00000506063 IGLV5-48A0A075B6I7 105 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 A0A1B0GX51 115 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 M0R143 59 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 TCL1BO95988 128 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 PSMB2P49721 201 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 CD164Q04900 197 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 PYY3Q5JQD4 70 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 LYRM7Q5U5X0 104 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 Q6JHZ5 121 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 HRCT1Q6UXD1 115 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.63□□□□□ -2.15
TCOF1-208ENST00000506063 SNHG12Q9BXW3 62 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 SS18L2Q9UHA2 77 aa1.63□□□□□ -2.15
TCOF1-208ENST00000506063 TSTD3H0UI37 97 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 H0YGX0 51 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 H3BQ85 93 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 FXYD2P54710 66 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 KRTAP10-5P60370 271 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 LINC00575Q6W349 94 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 C2orf91Q6ZV80 131 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 PRO1854Q9UHT4 67 aa1.62□□□□□ -2.15
TCOF1-208ENST00000506063 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
TCOF1-208ENST00000506063 K7ERJ3 54 aa1.61□□□□□ -2.15
TCOF1-208ENST00000506063 TRIAP1O43715 76 aa1.61□□□□□ -2.15
TCOF1-208ENST00000506063 MT1BP07438 61 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms